RNA–Protein interactions for RNA: ENST00000377400.8

CBWD1-203, Transcript of COBW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBWD1, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-203ENST00000377400 MASTLQ96GX5 879 aa28.24■■■□□ 2.11
CBWD1-203ENST00000377400 RBM17Q96I25 401 aaKnown RBP28.24■■■□□ 2.11
CBWD1-203ENST00000377400 BICC1Q9H694 974 aaKnown RBP28.24■■■□□ 2.11
CBWD1-203ENST00000377400 NPR1P16066 1061 aa28.23■■■□□ 2.11
CBWD1-203ENST00000377400 CRY2Q49AN0 593 aa28.23■■■□□ 2.11
CBWD1-203ENST00000377400 DDX46Q7L014 1031 aaKnown RBP28.23■■■□□ 2.11
CBWD1-203ENST00000377400 LAMB2P55268 1798 aa28.22■■■□□ 2.11
CBWD1-203ENST00000377400 KLRG2A4D1S0 409 aaPredicted RBP28.22■■■□□ 2.11
CBWD1-203ENST00000377400 SF3B3Q15393 1217 aaKnown RBP28.22■■■□□ 2.11
CBWD1-203ENST00000377400 LMBR1LQ6UX01 489 aa28.22■■■□□ 2.11
CBWD1-203ENST00000377400 IRX6P78412 446 aaPredicted RBP28.22■■■□□ 2.11
CBWD1-203ENST00000377400 FOXO4P98177 505 aa28.22■■■□□ 2.11
CBWD1-203ENST00000377400 EPHA10Q5JZY3 1008 aa28.22■■■□□ 2.11
CBWD1-203ENST00000377400 TTLL11Q8NHH1 800 aa28.22■■■□□ 2.11
CBWD1-203ENST00000377400 CRBNQ96SW2 442 aa28.22■■■□□ 2.11
CBWD1-203ENST00000377400 C1orf115Q9H7X2 142 aa28.22■■■□□ 2.11
CBWD1-203ENST00000377400 PIM2Q9P1W9 311 aa28.2■■■□□ 2.11
CBWD1-203ENST00000377400 STYK1Q6J9G0 422 aa28.19■■■□□ 2.1
CBWD1-203ENST00000377400 KAZALD1Q96I82 304 aa28.19■■■□□ 2.1
CBWD1-203ENST00000377400 GREM2Q9H772 168 aa28.19■■■□□ 2.1
CBWD1-203ENST00000377400 ALDH1B1P30837 517 aa28.19■■■□□ 2.1
CBWD1-203ENST00000377400 FAM161AQ3B820 660 aa28.19■■■□□ 2.1
CBWD1-203ENST00000377400 PELP1Q8IZL8 1130 aaKnown RBP28.18■■■□□ 2.1
CBWD1-203ENST00000377400 CNKSR1Q969H4 720 aa28.18■■■□□ 2.1
CBWD1-203ENST00000377400 COL11A2P13942 1736 aaPredicted RBP28.18■■■□□ 2.1
CBWD1-203ENST00000377400 MYH3P11055 1940 aa28.17■■■□□ 2.1
CBWD1-203ENST00000377400 CCDC57Q2TAC2 916 aa28.17■■■□□ 2.1
CBWD1-203ENST00000377400 CSF1RP07333 972 aa28.16■■■□□ 2.1
CBWD1-203ENST00000377400 KCNA3P22001 575 aa28.16■■■□□ 2.1
CBWD1-203ENST00000377400 IFIT5Q13325 482 aaKnown RBP28.16■■■□□ 2.1
CBWD1-203ENST00000377400 TAF7LQ5H9L4 462 aa28.16■■■□□ 2.1
CBWD1-203ENST00000377400 TTLL6Q8N841 843 aa28.16■■■□□ 2.1
CBWD1-203ENST00000377400 SEC31BQ9NQW1 1179 aa28.16■■■□□ 2.1
CBWD1-203ENST00000377400 ITGA6P23229 1130 aa28.16■■■□□ 2.1
CBWD1-203ENST00000377400 ANKRD18BA2A2Z9 1011 aa28.15■■■□□ 2.1
CBWD1-203ENST00000377400 HOXA10P31260 410 aaPredicted RBP28.15■■■□□ 2.1
CBWD1-203ENST00000377400 DALRD3Q5D0E6 543 aaKnown RBP28.15■■■□□ 2.1
CBWD1-203ENST00000377400 ANKRD44Q8N8A2 993 aa28.15■■■□□ 2.1
CBWD1-203ENST00000377400 CRAMP1Q96RY5 1269 aa28.15■■■□□ 2.1
CBWD1-203ENST00000377400 CDC5LQ99459 802 aaKnown RBP28.15■■■□□ 2.1
CBWD1-203ENST00000377400 BCS1LQ9Y276 419 aa28.15■■■□□ 2.1
CBWD1-203ENST00000377400 ZBTB40Q9NUA8 1239 aa28.14■■■□□ 2.1
CBWD1-203ENST00000377400 GRAPQ13588 217 aa28.14■■■□□ 2.09
CBWD1-203ENST00000377400 RABL6Q3YEC7 729 aaPredicted RBP28.14■■■□□ 2.09
CBWD1-203ENST00000377400 GRAPLQ8TC17 118 aaPredicted RBP28.14■■■□□ 2.09
CBWD1-203ENST00000377400 ZNF219Q9P2Y4 722 aaPredicted RBP28.14■■■□□ 2.09
CBWD1-203ENST00000377400 PRPF40BQ6NWY9 871 aaKnown RBP28.13■■■□□ 2.09
CBWD1-203ENST00000377400 KIAA1551Q9HCM1 1747 aa28.12■■■□□ 2.09
CBWD1-203ENST00000377400 ANKRD18AQ8IVF6 992 aa28.12■■■□□ 2.09
CBWD1-203ENST00000377400 CELF1Q92879 486 aaKnown RBP28.12■■■□□ 2.09
CBWD1-203ENST00000377400 TMX4Q9H1E5 349 aaPredicted RBP28.12■■■□□ 2.09
CBWD1-203ENST00000377400 SRGAP3O43295 1099 aa28.11■■■□□ 2.09
CBWD1-203ENST00000377400 IGHMBP2P38935 993 aaKnown RBP28.11■■■□□ 2.09
CBWD1-203ENST00000377400 GOLGB1Q14789 3259 aaKnown RBP28.11■■■□□ 2.09
CBWD1-203ENST00000377400 NEFLP07196 543 aa28.11■■■□□ 2.09
CBWD1-203ENST00000377400 RTL9Q8NET4 1388 aa28.1■■■□□ 2.09
CBWD1-203ENST00000377400 PPEF1O14829 653 aaPredicted RBP28.1■■■□□ 2.09
CBWD1-203ENST00000377400 RPS8P62241 208 aaKnown RBP28.1■■■□□ 2.09
CBWD1-203ENST00000377400 EXOC6Q8TAG9 804 aa28.1■■■□□ 2.09
CBWD1-203ENST00000377400 MPHOSPH8Q99549 860 aa28.1■■■□□ 2.09
CBWD1-203ENST00000377400 DLEC1Q9Y238 1755 aa28.1■■■□□ 2.09
CBWD1-203ENST00000377400 BBOX1O75936 387 aa28.09■■■□□ 2.09
CBWD1-203ENST00000377400 CACNA1SQ13698 1873 aa28.08■■■□□ 2.09
CBWD1-203ENST00000377400 ZNF594Q96JF6 807 aaPredicted RBP28.08■■■□□ 2.09
CBWD1-203ENST00000377400 C21orf2O43822 256 aa28.07■■■□□ 2.08
CBWD1-203ENST00000377400 GPR162Q16538 588 aa28.07■■■□□ 2.08
CBWD1-203ENST00000377400 TAF1P21675 1872 aa28.06■■■□□ 2.08
CBWD1-203ENST00000377400 CEP85Q6P2H3 762 aa28.06■■■□□ 2.08
CBWD1-203ENST00000377400 PNMA6EA0A0J9YXQ4 647 aa28.05■■■□□ 2.08
CBWD1-203ENST00000377400 ATP8B2P98198 1209 aa28.05■■■□□ 2.08
CBWD1-203ENST00000377400 KLHDC4Q8TBB5 520 aa28.05■■■□□ 2.08
CBWD1-203ENST00000377400 MTX1Q13505 466 aa28.04■■■□□ 2.08
CBWD1-203ENST00000377400 LDHAL6AQ6ZMR3 332 aa28.04■■■□□ 2.08
CBWD1-203ENST00000377400 CNNM1Q9NRU3 951 aa28.04■■■□□ 2.08
CBWD1-203ENST00000377400 TMC4Q7Z404 712 aa28.04■■■□□ 2.08
CBWD1-203ENST00000377400 RPAP2Q8IXW5 612 aaPredicted RBP28.04■■■□□ 2.08
CBWD1-203ENST00000377400 SLX4Q8IY92 1834 aa28.03■■■□□ 2.08
CBWD1-203ENST00000377400 DCAF8L1A6NGE4 600 aa28.03■■■□□ 2.08
CBWD1-203ENST00000377400 SIL1Q9H173 461 aa28.03■■■□□ 2.08
CBWD1-203ENST00000377400 BRCA1P38398 1863 aaKnown RBP28.03■■■□□ 2.08
CBWD1-203ENST00000377400 BSDC1Q9NW68 430 aaPredicted RBP28.02■■■□□ 2.08
CBWD1-203ENST00000377400 ATP6V0A2Q9Y487 856 aa28.02■■■□□ 2.08
CBWD1-203ENST00000377400 HMMRO75330 724 aa28.01■■■□□ 2.08
CBWD1-203ENST00000377400 OLFM4Q6UX06 510 aa28.01■■■□□ 2.08
CBWD1-203ENST00000377400 AAMPQ13685 434 aa28.01■■■□□ 2.07
CBWD1-203ENST00000377400 SOGA3Q5TF21 947 aa28.01■■■□□ 2.07
CBWD1-203ENST00000377400 PA2G4Q9UQ80 394 aaKnown RBP28.01■■■□□ 2.07
CBWD1-203ENST00000377400 COL4A1P02462 1669 aa28.01■■■□□ 2.07
CBWD1-203ENST00000377400 SP8Q8IXZ3 490 aa28■■■□□ 2.07
CBWD1-203ENST00000377400 YBX3P16989 372 aaKnown RBP eCLIP27.99■■■□□ 2.07
CBWD1-203ENST00000377400 RFX5P48382 616 aaPredicted RBP27.99■■■□□ 2.07
CBWD1-203ENST00000377400 PTPN12Q05209 780 aaKnown RBP27.99■■■□□ 2.07
CBWD1-203ENST00000377400 CCDC93Q567U6 631 aa27.99■■■□□ 2.07
CBWD1-203ENST00000377400 ANKIB1Q9P2G1 1089 aa27.99■■■□□ 2.07
CBWD1-203ENST00000377400 SPEF2Q9C093 1822 aa27.99■■■□□ 2.07
CBWD1-203ENST00000377400 SLC51AQ86UW1 340 aa27.99■■■□□ 2.07
CBWD1-203ENST00000377400 SSH3Q8TE77 659 aa27.98■■■□□ 2.07
CBWD1-203ENST00000377400 PUS3Q9BZE2 481 aaKnown RBP27.98■■■□□ 2.07
CBWD1-203ENST00000377400 NSFL1CQ9UNZ2 370 aaKnown RBP27.98■■■□□ 2.07
CBWD1-203ENST00000377400 OS9Q13438 667 aaPredicted RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms