RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 RLBP1P12271 317 aa25.12■■□□□ 1.61
DDR1-228ENST00000376575 FOXO4P98177 505 aa25.12■■□□□ 1.61
DDR1-228ENST00000376575 PRPF40BQ6NWY9 871 aaKnown RBP25.12■■□□□ 1.61
DDR1-228ENST00000376575 WWC3Q9ULE0 1092 aa25.12■■□□□ 1.61
DDR1-228ENST00000376575 RTL9Q8NET4 1388 aa25.12■■□□□ 1.61
DDR1-228ENST00000376575 CACNA1SQ13698 1873 aa25.11■■□□□ 1.61
DDR1-228ENST00000376575 GPR162Q16538 588 aa25.11■■□□□ 1.61
DDR1-228ENST00000376575 DZIP1LQ8IYY4 767 aaKnown RBP25.11■■□□□ 1.61
DDR1-228ENST00000376575 CLUAP1Q96AJ1 413 aa25.11■■□□□ 1.61
DDR1-228ENST00000376575 CCDC152Q4G0S7 254 aa25.1■■□□□ 1.61
DDR1-228ENST00000376575 TMEM57Q8N5G2 664 aa25.1■■□□□ 1.61
DDR1-228ENST00000376575 TAF1P21675 1872 aa25.1■■□□□ 1.61
DDR1-228ENST00000376575 COL4A1P02462 1669 aa25.1■■□□□ 1.61
DDR1-228ENST00000376575 GRIN3BO60391 1043 aa25.09■■□□□ 1.61
DDR1-228ENST00000376575 EPHA10Q5JZY3 1008 aa25.09■■□□□ 1.61
DDR1-228ENST00000376575 DDX46Q7L014 1031 aaKnown RBP25.09■■□□□ 1.61
DDR1-228ENST00000376575 SUCLG2Q96I99 432 aa25.09■■□□□ 1.61
DDR1-228ENST00000376575 GRAPQ13588 217 aa25.08■■□□□ 1.61
DDR1-228ENST00000376575 GRAPLQ8TC17 118 aaPredicted RBP25.08■■□□□ 1.61
DDR1-228ENST00000376575 SNED1Q8TER0 1413 aa25.08■■□□□ 1.61
DDR1-228ENST00000376575 BBOX1O75936 387 aa25.07■■□□□ 1.6
DDR1-228ENST00000376575 RABL6Q3YEC7 729 aaPredicted RBP25.07■■□□□ 1.6
DDR1-228ENST00000376575 PLIN1O60240 522 aa25.06■■□□□ 1.6
DDR1-228ENST00000376575 MS4A1P11836 297 aa25.06■■□□□ 1.6
DDR1-228ENST00000376575 FTSJ3Q8IY81 847 aaKnown RBP25.06■■□□□ 1.6
DDR1-228ENST00000376575 PELP1Q8IZL8 1130 aaKnown RBP25.06■■□□□ 1.6
DDR1-228ENST00000376575 MEIS3Q99687 375 aa25.06■■□□□ 1.6
DDR1-228ENST00000376575 GREM2Q9H772 168 aa25.06■■□□□ 1.6
DDR1-228ENST00000376575 CELF1Q92879 486 aaKnown RBP25.05■■□□□ 1.6
DDR1-228ENST00000376575 SEC31BQ9NQW1 1179 aa25.05■■□□□ 1.6
DDR1-228ENST00000376575 FER1L6Q2WGJ9 1857 aa25.04■■□□□ 1.6
DDR1-228ENST00000376575 DCAF8L1A6NGE4 600 aa25.04■■□□□ 1.6
DDR1-228ENST00000376575 C21orf2O43822 256 aa25.04■■□□□ 1.6
DDR1-228ENST00000376575 PDE3AQ14432 1141 aa25.04■■□□□ 1.6
DDR1-228ENST00000376575 ANKRD44Q8N8A2 993 aa25.04■■□□□ 1.6
DDR1-228ENST00000376575 PANK1Q8TE04 598 aa25.04■■□□□ 1.6
DDR1-228ENST00000376575 PPEF1O14829 653 aaPredicted RBP25.03■■□□□ 1.6
DDR1-228ENST00000376575 SOGA3Q5TF21 947 aa25.03■■□□□ 1.6
DDR1-228ENST00000376575 LMBR1LQ6UX01 489 aa25.03■■□□□ 1.6
DDR1-228ENST00000376575 TMC4Q7Z404 712 aa25.03■■□□□ 1.6
DDR1-228ENST00000376575 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.03■■□□□ 1.6
DDR1-228ENST00000376575 ATP6V0A2Q9Y487 856 aa25.03■■□□□ 1.6
DDR1-228ENST00000376575 LRRC37AA6NMS7 1700 aa25.03■■□□□ 1.6
DDR1-228ENST00000376575 ZBTB7BO15156 539 aaPredicted RBP25.02■■□□□ 1.6
DDR1-228ENST00000376575 GNAI3P08754 354 aa25.02■■□□□ 1.6
DDR1-228ENST00000376575 UBTFL1P0CB47 393 aaPredicted RBP25.02■■□□□ 1.6
DDR1-228ENST00000376575 RPS8P62241 208 aaKnown RBP25.02■■□□□ 1.6
DDR1-228ENST00000376575 FAM161AQ3B820 660 aa25.02■■□□□ 1.6
DDR1-228ENST00000376575 CC2D2BQ6DHV5 1058 aa25.02■■□□□ 1.6
DDR1-228ENST00000376575 SP8Q8IXZ3 490 aa25.02■■□□□ 1.6
DDR1-228ENST00000376575 CCDC85AQ96PX6 553 aaPredicted RBP25.02■■□□□ 1.6
DDR1-228ENST00000376575 BICC1Q9H694 974 aaKnown RBP25.02■■□□□ 1.6
DDR1-228ENST00000376575 ITGA6P23229 1130 aa25.01■■□□□ 1.59
DDR1-228ENST00000376575 OLFM4Q6UX06 510 aa25.01■■□□□ 1.59
DDR1-228ENST00000376575 SLC51AQ86UW1 340 aa25■■□□□ 1.59
DDR1-228ENST00000376575 HDAC5Q9UQL6 1122 aa25■■□□□ 1.59
DDR1-228ENST00000376575 NFKBIEO00221 500 aa24.99■■□□□ 1.59
DDR1-228ENST00000376575 RRP1P56182 461 aaKnown RBP24.99■■□□□ 1.59
DDR1-228ENST00000376575 GRIPAP1Q4V328 841 aa24.99■■□□□ 1.59
DDR1-228ENST00000376575 C20orf194Q5TEA3 1177 aa24.99■■□□□ 1.59
DDR1-228ENST00000376575 ITPRIPQ8IWB1 547 aa24.99■■□□□ 1.59
DDR1-228ENST00000376575 CDC5LQ99459 802 aaKnown RBP24.99■■□□□ 1.59
DDR1-228ENST00000376575 LTBP3Q9NS15 1303 aa24.98■■□□□ 1.59
DDR1-228ENST00000376575 MVPQ14764 893 aaKnown RBP24.98■■□□□ 1.59
DDR1-228ENST00000376575 CCDC93Q567U6 631 aa24.98■■□□□ 1.59
DDR1-228ENST00000376575 RTKN2Q8IZC4 609 aa24.98■■□□□ 1.59
DDR1-228ENST00000376575 LRRFIP2Q9Y608 721 aaKnown RBP24.98■■□□□ 1.59
DDR1-228ENST00000376575 SBF1O95248 1867 aa24.98■■□□□ 1.59
DDR1-228ENST00000376575 CHD4Q14839 1912 aa24.97■■□□□ 1.59
DDR1-228ENST00000376575 ARHGAP27Q6ZUM4 889 aa24.97■■□□□ 1.59
DDR1-228ENST00000376575 ANKRD18AQ8IVF6 992 aa24.97■■□□□ 1.59
DDR1-228ENST00000376575 BSDC1Q9NW68 430 aaPredicted RBP24.97■■□□□ 1.59
DDR1-228ENST00000376575 ZNF219Q9P2Y4 722 aaPredicted RBP24.97■■□□□ 1.59
DDR1-228ENST00000376575 LTBP1Q14766 1721 aa24.96■■□□□ 1.59
DDR1-228ENST00000376575 ANKRD18BA2A2Z9 1011 aa24.96■■□□□ 1.59
DDR1-228ENST00000376575 IFIT5Q13325 482 aaKnown RBP24.96■■□□□ 1.59
DDR1-228ENST00000376575 PRELPP51888 382 aa24.95■■□□□ 1.58
DDR1-228ENST00000376575 MTX1Q13505 466 aa24.95■■□□□ 1.58
DDR1-228ENST00000376575 PSMD1Q99460 953 aa24.95■■□□□ 1.58
DDR1-228ENST00000376575 GNAI2P04899 355 aa24.94■■□□□ 1.58
DDR1-228ENST00000376575 RFX5P48382 616 aaPredicted RBP24.94■■□□□ 1.58
DDR1-228ENST00000376575 CCDC57Q2TAC2 916 aa24.94■■□□□ 1.58
DDR1-228ENST00000376575 RTFDC1Q9BY42 306 aaPredicted RBP24.94■■□□□ 1.58
DDR1-228ENST00000376575 COG6Q9Y2V7 657 aa24.94■■□□□ 1.58
DDR1-228ENST00000376575 FKBP4Q02790 459 aaKnown RBP eCLIP24.93■■□□□ 1.58
DDR1-228ENST00000376575 DDX19BQ9UMR2 479 aa24.93■■□□□ 1.58
DDR1-228ENST00000376575 CHMP3Q9Y3E7 222 aa24.93■■□□□ 1.58
DDR1-228ENST00000376575 SPEF2Q9C093 1822 aa24.93■■□□□ 1.58
DDR1-228ENST00000376575 IGHMBP2P38935 993 aaKnown RBP24.92■■□□□ 1.58
DDR1-228ENST00000376575 TAOK3Q9H2K8 898 aa24.92■■□□□ 1.58
DDR1-228ENST00000376575 PODXL2Q9NZ53 605 aa24.92■■□□□ 1.58
DDR1-228ENST00000376575 DUOX1Q9NRD9 1551 aa24.92■■□□□ 1.58
DDR1-228ENST00000376575 RASSF7Q02833 373 aa24.91■■□□□ 1.58
DDR1-228ENST00000376575 ZBTB40Q9NUA8 1239 aa24.91■■□□□ 1.58
DDR1-228ENST00000376575 MINPP1Q9UNW1 487 aa24.91■■□□□ 1.58
DDR1-228ENST00000376575 CCDC88AQ3V6T2 1871 aa24.9■■□□□ 1.58
DDR1-228ENST00000376575 ZNF594Q96JF6 807 aaPredicted RBP24.9■■□□□ 1.58
DDR1-228ENST00000376575 DICER1Q9UPY3 1922 aaKnown RBP24.89■■□□□ 1.58
DDR1-228ENST00000376575 LMNB1P20700 586 aa24.89■■□□□ 1.58
DDR1-228ENST00000376575 GPSM2P81274 684 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms