RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 CTAGE5O15320 804 aa15.41■□□□□ 0.06
CUL4A-203ENST00000375441 HMGB1P09429 215 aaKnown RBP15.41■□□□□ 0.06
CUL4A-203ENST00000375441 EDC3Q96F86 508 aaKnown RBP15.41■□□□□ 0.06
CUL4A-203ENST00000375441 CCDC85AQ96PX6 553 aaPredicted RBP15.41■□□□□ 0.06
CUL4A-203ENST00000375441 POLA2Q14181 598 aa15.41■□□□□ 0.06
CUL4A-203ENST00000375441 CCDC158Q5M9N0 1113 aa15.41■□□□□ 0.06
CUL4A-203ENST00000375441 IL25Q9H293 177 aa15.41■□□□□ 0.06
CUL4A-203ENST00000375441 NDUFB9Q9Y6M9 179 aa15.41■□□□□ 0.06
CUL4A-203ENST00000375441 RIOK3O14730 519 aaKnown RBP15.4■□□□□ 0.06
CUL4A-203ENST00000375441 STX1AQ16623 288 aa15.4■□□□□ 0.06
CUL4A-203ENST00000375441 TTC39AQ5SRH9 613 aa15.4■□□□□ 0.06
CUL4A-203ENST00000375441 MNS1Q8NEH6 495 aa15.4■□□□□ 0.06
CUL4A-203ENST00000375441 CBX8Q9HC52 389 aa15.4■□□□□ 0.06
CUL4A-203ENST00000375441 CEP126Q9P2H0 1117 aa15.4■□□□□ 0.06
CUL4A-203ENST00000375441 IFIT1P09914 478 aaKnown RBP15.4■□□□□ 0.06
CUL4A-203ENST00000375441 CREBRFQ8IUR6 639 aa15.4■□□□□ 0.06
CUL4A-203ENST00000375441 A0A0D9SFI3 127 aa15.4■□□□□ 0.06
CUL4A-203ENST00000375441 CCDC129Q6ZRS4 1044 aa15.4■□□□□ 0.06
CUL4A-203ENST00000375441 LEO1Q8WVC0 666 aaPredicted RBP15.4■□□□□ 0.06
CUL4A-203ENST00000375441 DDX21Q9NR30 783 aaKnown RBP eCLIP15.4■□□□□ 0.06
CUL4A-203ENST00000375441 JAK2O60674 1132 aa15.4■□□□□ 0.06
CUL4A-203ENST00000375441 HSPA2P54652 639 aa15.4■□□□□ 0.06
CUL4A-203ENST00000375441 MCMDC2Q4G0Z9 681 aa15.4■□□□□ 0.06
CUL4A-203ENST00000375441 CAVIN2O95810 425 aa15.39■□□□□ 0.05
CUL4A-203ENST00000375441 TFCP2Q12800 502 aa15.39■□□□□ 0.05
CUL4A-203ENST00000375441 CCDC34Q96HJ3 373 aa15.39■□□□□ 0.05
CUL4A-203ENST00000375441 BIN1O00499 593 aa15.39■□□□□ 0.05
CUL4A-203ENST00000375441 MAP2P11137 1827 aaKnown RBP15.39■□□□□ 0.05
CUL4A-203ENST00000375441 SERPINC1P01008 464 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 PROSER3Q2NL68 480 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 OLFM4Q6UX06 510 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 PDILTQ8N807 584 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 PYCARDQ9ULZ3 195 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 POLR3DP05423 398 aaPredicted RBP15.38■□□□□ 0.05
CUL4A-203ENST00000375441 CEP135Q66GS9 1140 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 C8orf76Q96K31 380 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 CTNNA3Q9UI47 895 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 IFT172Q9UG01 1749 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 SKILP12757 684 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 CHST3Q7LGC8 479 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 RAB11FIP4Q86YS3 637 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 TMEM87AQ8NBN3 555 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 TTC14Q96N46 770 aa15.38■□□□□ 0.05
CUL4A-203ENST00000375441 GCP02774 474 aa15.37■□□□□ 0.05
CUL4A-203ENST00000375441 ATP2B1P20020 1258 aa15.37■□□□□ 0.05
CUL4A-203ENST00000375441 HAND2P61296 217 aa15.37■□□□□ 0.05
CUL4A-203ENST00000375441 CCDC57Q2TAC2 916 aa15.37■□□□□ 0.05
CUL4A-203ENST00000375441 LMBR1LQ6UX01 489 aa15.37■□□□□ 0.05
CUL4A-203ENST00000375441 KIF18AQ8NI77 898 aa15.37■□□□□ 0.05
CUL4A-203ENST00000375441 SNRKQ9NRH2 765 aa15.37■□□□□ 0.05
CUL4A-203ENST00000375441 GIGYF1O75420 1035 aaPredicted RBP15.37■□□□□ 0.05
CUL4A-203ENST00000375441 APOBRQ0VD83 1088 aa15.37■□□□□ 0.05
CUL4A-203ENST00000375441 NFATC2IPQ8NCF5 419 aa15.37■□□□□ 0.05
CUL4A-203ENST00000375441 CLSTN2Q9H4D0 955 aa15.37■□□□□ 0.05
CUL4A-203ENST00000375441 IMMTQ16891 758 aaKnown RBP15.37■□□□□ 0.05
CUL4A-203ENST00000375441 MAP4K1Q92918 833 aa15.37■□□□□ 0.05
CUL4A-203ENST00000375441 SFPQP23246 707 aaKnown RBP eCLIP15.36■□□□□ 0.05
CUL4A-203ENST00000375441 BCL2L12Q9HB09 334 aa15.36■□□□□ 0.05
CUL4A-203ENST00000375441 PAXBP1Q9Y5B6 917 aa15.36■□□□□ 0.05
CUL4A-203ENST00000375441 NEMFO60524 1076 aa15.36■□□□□ 0.05
CUL4A-203ENST00000375441 LRMPQ12912 555 aa15.36■□□□□ 0.05
CUL4A-203ENST00000375441 FAM177A1Q8N128 213 aaPredicted RBP15.36■□□□□ 0.05
CUL4A-203ENST00000375441 TLR7Q9NYK1 1049 aaKnown RBP15.36■□□□□ 0.05
CUL4A-203ENST00000375441 ZNF75DP51815 510 aa15.35■□□□□ 0.05
CUL4A-203ENST00000375441 ISM2Q6H9L7 571 aa15.35■□□□□ 0.05
CUL4A-203ENST00000375441 STK11IPQ8N1F8 1099 aa15.35■□□□□ 0.05
CUL4A-203ENST00000375441 DBNDD2Q9BQY9 259 aa15.35■□□□□ 0.05
CUL4A-203ENST00000375441 PTPDC1A2A3K4 754 aa15.35■□□□□ 0.05
CUL4A-203ENST00000375441 SNRPA1P09661 255 aaKnown RBP15.35■□□□□ 0.05
CUL4A-203ENST00000375441 SAFBQ15424 915 aaKnown RBP eCLIP15.35■□□□□ 0.05
CUL4A-203ENST00000375441 HOOK1Q9UJC3 728 aaKnown RBP15.35■□□□□ 0.05
CUL4A-203ENST00000375441 DLC1Q96QB1 1528 aa15.35■□□□□ 0.05
CUL4A-203ENST00000375441 NR1I2O75469 434 aa15.35■□□□□ 0.05
CUL4A-203ENST00000375441 AOPEPQ8N6M6 819 aa15.35■□□□□ 0.05
CUL4A-203ENST00000375441 ARGLU1Q9NWB6 273 aaPredicted RBP15.35■□□□□ 0.05
CUL4A-203ENST00000375441 PRAMEF22A3QJZ6 481 aa15.34■□□□□ 0.05
CUL4A-203ENST00000375441 JMYQ8N9B5 988 aa15.34■□□□□ 0.05
CUL4A-203ENST00000375441 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.34■□□□□ 0.05
CUL4A-203ENST00000375441 CGNQ9P2M7 1197 aaKnown RBP15.34■□□□□ 0.05
CUL4A-203ENST00000375441 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.34■□□□□ 0.05
CUL4A-203ENST00000375441 V9GYY5 206 aaPredicted RBP15.34■□□□□ 0.05
CUL4A-203ENST00000375441 IGSF3O75054 1194 aa15.34■□□□□ 0.05
CUL4A-203ENST00000375441 EVA1CP58658 441 aa15.34■□□□□ 0.05
CUL4A-203ENST00000375441 NECTIN1Q15223 517 aa15.34■□□□□ 0.05
CUL4A-203ENST00000375441 DHX32Q7L7V1 743 aaKnown RBP15.34■□□□□ 0.05
CUL4A-203ENST00000375441 ZBTB3Q9H5J0 574 aa15.34■□□□□ 0.05
CUL4A-203ENST00000375441 GOLGA8BA8MQT2 603 aa15.34■□□□□ 0.05
CUL4A-203ENST00000375441 AKAP17AQ02040 695 aaKnown RBP15.34■□□□□ 0.05
CUL4A-203ENST00000375441 TMC6Q7Z403 805 aa15.34■□□□□ 0.05
CUL4A-203ENST00000375441 SMAP1Q8IYB5 467 aaPredicted RBP15.34■□□□□ 0.05
CUL4A-203ENST00000375441 SLC3A2P08195 630 aaKnown RBP15.33■□□□□ 0.05
CUL4A-203ENST00000375441 TNNI3KQ59H18 835 aa15.33■□□□□ 0.05
CUL4A-203ENST00000375441 KRT28Q7Z3Y7 464 aa15.33■□□□□ 0.05
CUL4A-203ENST00000375441 ORC3Q9UBD5 711 aaPredicted RBP15.33■□□□□ 0.05
CUL4A-203ENST00000375441 USP16Q9Y5T5 823 aa15.33■□□□□ 0.05
CUL4A-203ENST00000375441 MRVI1Q9Y6F6 885 aa15.33■□□□□ 0.05
CUL4A-203ENST00000375441 FPGT-TNNI3KV9GXZ4 949 aa15.33■□□□□ 0.05
CUL4A-203ENST00000375441 CDC42BPGQ6DT37 1551 aa15.33■□□□□ 0.04
CUL4A-203ENST00000375441 KIAA1524Q8TCG1 905 aa15.33■□□□□ 0.04
CUL4A-203ENST00000375441 SMTNL1A8MU46 457 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms