RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 MTX1Q13505 466 aa25.79■■□□□ 1.72
NELFE-202ENST00000375429 SF3B3Q15393 1217 aaKnown RBP25.79■■□□□ 1.72
NELFE-202ENST00000375429 ERICH6BQ5W0A0 696 aa25.79■■□□□ 1.72
NELFE-202ENST00000375429 CHMP3Q9Y3E7 222 aa25.78■■□□□ 1.72
NELFE-202ENST00000375429 KLRG2A4D1S0 409 aaPredicted RBP25.77■■□□□ 1.72
NELFE-202ENST00000375429 GREM2Q9H772 168 aa25.77■■□□□ 1.72
NELFE-202ENST00000375429 SRGAP3O43295 1099 aa25.76■■□□□ 1.71
NELFE-202ENST00000375429 FAM161AQ3B820 660 aa25.76■■□□□ 1.71
NELFE-202ENST00000375429 CCDC152Q4G0S7 254 aa25.76■■□□□ 1.71
NELFE-202ENST00000375429 C10orf71Q711Q0 1435 aa25.76■■□□□ 1.71
NELFE-202ENST00000375429 PDE6BP35913 854 aa25.75■■□□□ 1.71
NELFE-202ENST00000375429 CRY2Q49AN0 593 aa25.75■■□□□ 1.71
NELFE-202ENST00000375429 KIF13BQ9NQT8 1826 aa25.74■■□□□ 1.71
NELFE-202ENST00000375429 TAF1P21675 1872 aa25.74■■□□□ 1.71
NELFE-202ENST00000375429 POLA2Q14181 598 aa25.73■■□□□ 1.71
NELFE-202ENST00000375429 SSH3Q8TE77 659 aa25.73■■□□□ 1.71
NELFE-202ENST00000375429 SEC31BQ9NQW1 1179 aa25.73■■□□□ 1.71
NELFE-202ENST00000375429 ITGA6P23229 1130 aa25.73■■□□□ 1.71
NELFE-202ENST00000375429 RFX5P48382 616 aaPredicted RBP25.73■■□□□ 1.71
NELFE-202ENST00000375429 IFIT5Q13325 482 aaKnown RBP25.72■■□□□ 1.71
NELFE-202ENST00000375429 CCDC57Q2TAC2 916 aa25.72■■□□□ 1.71
NELFE-202ENST00000375429 RTL9Q8NET4 1388 aa25.72■■□□□ 1.71
NELFE-202ENST00000375429 SRGNP10124 158 aa25.71■■□□□ 1.71
NELFE-202ENST00000375429 KLHDC4Q8TBB5 520 aa25.71■■□□□ 1.71
NELFE-202ENST00000375429 COL11A2P13942 1736 aaPredicted RBP25.7■■□□□ 1.71
NELFE-202ENST00000375429 ANKRD18BA2A2Z9 1011 aa25.7■■□□□ 1.71
NELFE-202ENST00000375429 IGHDP01880 384 aa25.7■■□□□ 1.71
NELFE-202ENST00000375429 C2CD5Q86YS7 1000 aa25.7■■□□□ 1.71
NELFE-202ENST00000375429 RPGRQ92834 1020 aaKnown RBP25.7■■□□□ 1.71
NELFE-202ENST00000375429 GTF3C3Q9Y5Q9 886 aa25.7■■□□□ 1.71
NELFE-202ENST00000375429 HMMRO75330 724 aa25.69■■□□□ 1.7
NELFE-202ENST00000375429 PTPN12Q05209 780 aaKnown RBP25.69■■□□□ 1.7
NELFE-202ENST00000375429 HDAC1Q13547 482 aaPredicted RBP25.69■■□□□ 1.7
NELFE-202ENST00000375429 ZNF594Q96JF6 807 aaPredicted RBP25.69■■□□□ 1.7
NELFE-202ENST00000375429 COL4A1P02462 1669 aa25.69■■□□□ 1.7
NELFE-202ENST00000375429 H0YIN7 160 aa25.69■■□□□ 1.7
NELFE-202ENST00000375429 CHRNA5P30532 468 aa25.69■■□□□ 1.7
NELFE-202ENST00000375429 HOXA10P31260 410 aaPredicted RBP25.69■■□□□ 1.7
NELFE-202ENST00000375429 DDX46Q7L014 1031 aaKnown RBP25.69■■□□□ 1.7
NELFE-202ENST00000375429 PPP4R2Q9NY27 417 aa25.69■■□□□ 1.7
NELFE-202ENST00000375429 PA2G4Q9UQ80 394 aaKnown RBP25.69■■□□□ 1.7
NELFE-202ENST00000375429 PPP1R1BQ9UD71 204 aaPredicted RBP25.68■■□□□ 1.7
NELFE-202ENST00000375429 NPR1P16066 1061 aa25.67■■□□□ 1.7
NELFE-202ENST00000375429 CELF1Q92879 486 aaKnown RBP25.67■■□□□ 1.7
NELFE-202ENST00000375429 RBM17Q96I25 401 aaKnown RBP25.67■■□□□ 1.7
NELFE-202ENST00000375429 RWDD1Q9H446 243 aaPredicted RBP25.67■■□□□ 1.7
NELFE-202ENST00000375429 COPRSQ9NQ92 184 aa25.67■■□□□ 1.7
NELFE-202ENST00000375429 PDZRN3Q9UPQ7 1066 aa25.67■■□□□ 1.7
NELFE-202ENST00000375429 CD2APQ9Y5K6 639 aa25.67■■□□□ 1.7
NELFE-202ENST00000375429 TGFB2P61812 414 aa25.66■■□□□ 1.7
NELFE-202ENST00000375429 KLHL34Q8N239 644 aa25.66■■□□□ 1.7
NELFE-202ENST00000375429 MASTLQ96GX5 879 aa25.66■■□□□ 1.7
NELFE-202ENST00000375429 A0A0G2JLW4 131 aa25.65■■□□□ 1.7
NELFE-202ENST00000375429 CRAMP1Q96RY5 1269 aa25.65■■□□□ 1.7
NELFE-202ENST00000375429 CDC5LQ99459 802 aaKnown RBP25.65■■□□□ 1.7
NELFE-202ENST00000375429 KIAA1551Q9HCM1 1747 aa25.65■■□□□ 1.7
NELFE-202ENST00000375429 DPEP1P16444 411 aa25.65■■□□□ 1.7
NELFE-202ENST00000375429 TAF7LQ5H9L4 462 aa25.65■■□□□ 1.7
NELFE-202ENST00000375429 B4GALNT3Q6L9W6 998 aa25.65■■□□□ 1.7
NELFE-202ENST00000375429 ZNF622Q969S3 477 aaKnown RBP eCLIP25.65■■□□□ 1.75e-7■□□□□ 9.9
NELFE-202ENST00000375429 CCDC136Q96JN2 1154 aa25.65■■□□□ 1.7
NELFE-202ENST00000375429 SPEF2Q9C093 1822 aa25.64■■□□□ 1.7
NELFE-202ENST00000375429 SURF6O75683 361 aaKnown RBP25.64■■□□□ 1.69
NELFE-202ENST00000375429 KCNA3P22001 575 aa25.64■■□□□ 1.69
NELFE-202ENST00000375429 RPS8P62241 208 aaKnown RBP25.64■■□□□ 1.69
NELFE-202ENST00000375429 GRAPQ13588 217 aa25.64■■□□□ 1.69
NELFE-202ENST00000375429 STYK1Q6J9G0 422 aa25.64■■□□□ 1.69
NELFE-202ENST00000375429 GRAPLQ8TC17 118 aaPredicted RBP25.64■■□□□ 1.69
NELFE-202ENST00000375429 PUS3Q9BZE2 481 aaKnown RBP25.64■■□□□ 1.69
NELFE-202ENST00000375429 SIL1Q9H173 461 aa25.64■■□□□ 1.69
NELFE-202ENST00000375429 NOP58Q9Y2X3 529 aaKnown RBP25.64■■□□□ 1.69
NELFE-202ENST00000375429 ANKRD18AQ8IVF6 992 aa25.63■■□□□ 1.69
NELFE-202ENST00000375429 DCTPP1Q9H773 170 aa25.63■■□□□ 1.69
NELFE-202ENST00000375429 DLEC1Q9Y238 1755 aa25.63■■□□□ 1.69
NELFE-202ENST00000375429 LRRC24Q50LG9 513 aa25.62■■□□□ 1.69
NELFE-202ENST00000375429 LDHAL6AQ6ZMR3 332 aa25.62■■□□□ 1.69
NELFE-202ENST00000375429 EXOC6BQ9Y2D4 811 aa25.62■■□□□ 1.69
NELFE-202ENST00000375429 ALDH1B1P30837 517 aa25.61■■□□□ 1.69
NELFE-202ENST00000375429 IGHMBP2P38935 993 aaKnown RBP25.61■■□□□ 1.69
NELFE-202ENST00000375429 CACNA1SQ13698 1873 aa25.61■■□□□ 1.69
NELFE-202ENST00000375429 MPHOSPH8Q99549 860 aa25.61■■□□□ 1.69
NELFE-202ENST00000375429 FHDC1Q9C0D6 1143 aaPredicted RBP25.61■■□□□ 1.69
NELFE-202ENST00000375429 EYA2O00167 538 aa25.6■■□□□ 1.69
NELFE-202ENST00000375429 BBOX1O75936 387 aa25.6■■□□□ 1.69
NELFE-202ENST00000375429 ATG9AQ7Z3C6 839 aa25.6■■□□□ 1.69
NELFE-202ENST00000375429 G3BP1Q13283 466 aaKnown RBP eCLIP25.59■■□□□ 1.698e-8■■■□□ 18.4
NELFE-202ENST00000375429 NLGN2Q8NFZ4 835 aa25.59■■□□□ 1.69
NELFE-202ENST00000375429 CNKSR1Q969H4 720 aa25.59■■□□□ 1.69
NELFE-202ENST00000375429 CNNM1Q9NRU3 951 aa25.59■■□□□ 1.69
NELFE-202ENST00000375429 BSDC1Q9NW68 430 aaPredicted RBP25.59■■□□□ 1.69
NELFE-202ENST00000375429 RIPOR2Q9Y4F9 1068 aa25.59■■□□□ 1.69
NELFE-202ENST00000375429 SLX4Q8IY92 1834 aa25.59■■□□□ 1.69
NELFE-202ENST00000375429 CIAO1O76071 339 aa25.58■■□□□ 1.69
NELFE-202ENST00000375429 FBXO3Q9UK99 471 aa25.58■■□□□ 1.69
NELFE-202ENST00000375429 LRP5O75197 1615 aa25.58■■□□□ 1.69
NELFE-202ENST00000375429 KDM2BQ8NHM5 1336 aa25.57■■□□□ 1.68
NELFE-202ENST00000375429 SLC51AQ86UW1 340 aa25.56■■□□□ 1.68
NELFE-202ENST00000375429 SMC5Q8IY18 1101 aa25.56■■□□□ 1.68
NELFE-202ENST00000375429 GCC1Q96CN9 775 aa25.56■■□□□ 1.68
NELFE-202ENST00000375429 BRCA1P38398 1863 aaKnown RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms