RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 DDB1Q16531 1140 aa14.21□□□□□ -0.13
NPLOC4-202ENST00000374747 DYNC1I1O14576 645 aa14.21□□□□□ -0.14
NPLOC4-202ENST00000374747 TSPYL6Q8N831 410 aa14.21□□□□□ -0.14
NPLOC4-202ENST00000374747 NUCB1Q02818 461 aa14.2□□□□□ -0.14
NPLOC4-202ENST00000374747 FKBP15Q5T1M5 1219 aa14.2□□□□□ -0.14
NPLOC4-202ENST00000374747 SPHKAPQ2M3C7 1700 aa14.2□□□□□ -0.14
NPLOC4-202ENST00000374747 NFATC2IPQ8NCF5 419 aa14.2□□□□□ -0.14
NPLOC4-202ENST00000374747 PCDH11XQ9BZA7 1347 aa14.2□□□□□ -0.14
NPLOC4-202ENST00000374747 PCDH11YQ9BZA8 1340 aa14.2□□□□□ -0.14
NPLOC4-202ENST00000374747 PPP4R3BQ5MIZ7 849 aa14.2□□□□□ -0.14
NPLOC4-202ENST00000374747 EVI5LQ96CN4 794 aa14.2□□□□□ -0.14
NPLOC4-202ENST00000374747 LMTK3Q96Q04 1460 aa14.2□□□□□ -0.14
NPLOC4-202ENST00000374747 ARHGEF10O15013 1369 aa14.2□□□□□ -0.14
NPLOC4-202ENST00000374747 METP08581 1390 aa14.2□□□□□ -0.14
NPLOC4-202ENST00000374747 CCDC91Q7Z6B0 441 aa14.2□□□□□ -0.14
NPLOC4-202ENST00000374747 LUZP1Q86V48 1076 aa14.19□□□□□ -0.14
NPLOC4-202ENST00000374747 PRIMPOLQ96LW4 560 aa14.19□□□□□ -0.14
NPLOC4-202ENST00000374747 TRMT1Q9NXH9 659 aaKnown RBP14.19□□□□□ -0.14
NPLOC4-202ENST00000374747 LIMCH1Q9UPQ0 1083 aa14.19□□□□□ -0.14
NPLOC4-202ENST00000374747 GTF2F1P35269 517 aaKnown RBP eCLIP14.19□□□□□ -0.143e-6■□□□□ 9.5
NPLOC4-202ENST00000374747 CETN2P41208 172 aa14.19□□□□□ -0.14
NPLOC4-202ENST00000374747 ABCF2Q9UG63 623 aa14.19□□□□□ -0.14
NPLOC4-202ENST00000374747 ABCA6Q8N139 1617 aa14.19□□□□□ -0.14
NPLOC4-202ENST00000374747 GRM8O00222 908 aa14.19□□□□□ -0.14
NPLOC4-202ENST00000374747 PAFAH1B1P43034 410 aa14.19□□□□□ -0.14
NPLOC4-202ENST00000374747 KLHL10Q6JEL2 608 aa14.19□□□□□ -0.14
NPLOC4-202ENST00000374747 LINS1Q8NG48 757 aa14.19□□□□□ -0.14
NPLOC4-202ENST00000374747 PPP1R12BO60237 982 aaPredicted RBP14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 ATP8B2P98198 1209 aa14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 CKAP2LQ8IYA6 745 aa14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 CDC5LQ99459 802 aaKnown RBP14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 CCDC113Q9H0I3 377 aa14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 ADCY5O95622 1261 aa14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 DESP17661 470 aa14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 RHPN1Q8TCX5 695 aa14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 C8orf76Q96K31 380 aa14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 MAP3K12Q12852 859 aa14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 TTC22Q5TAA0 569 aa14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 LDHAL6AQ6ZMR3 332 aa14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 IFFO1Q0D2I5 559 aa14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 UVSSAQ2YD98 709 aa14.18□□□□□ -0.14
NPLOC4-202ENST00000374747 GOLGA6L10A0A0M3HER8 536 aa14.17□□□□□ -0.14
NPLOC4-202ENST00000374747 USO1O60763 962 aaKnown RBP14.17□□□□□ -0.14
NPLOC4-202ENST00000374747 HMGB1P09429 215 aaKnown RBP14.17□□□□□ -0.14
NPLOC4-202ENST00000374747 GOLGA6L9A6NEM1 432 aa14.17□□□□□ -0.14
NPLOC4-202ENST00000374747 CACNA2D4Q7Z3S7 1137 aa14.17□□□□□ -0.14
NPLOC4-202ENST00000374747 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.17□□□□□ -0.14
NPLOC4-202ENST00000374747 PHAXQ9H814 394 aaKnown RBP14.17□□□□□ -0.14
NPLOC4-202ENST00000374747 HOXB7P09629 217 aa14.17□□□□□ -0.14
NPLOC4-202ENST00000374747 BMS1Q14692 1282 aaKnown RBP14.17□□□□□ -0.14
NPLOC4-202ENST00000374747 VPS36Q86VN1 386 aa14.17□□□□□ -0.14
NPLOC4-202ENST00000374747 SMC1AQ14683 1233 aaKnown RBP14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 KLHL40Q2TBA0 621 aa14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 RNF187Q5TA31 235 aaPredicted RBP14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 CDCA7Q9BWT1 371 aaPredicted RBP14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 TRIM35Q9UPQ4 493 aa14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 YEATS4O95619 227 aa14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 STX1AQ16623 288 aa14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 MAP3K4Q9Y6R4 1608 aa14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 SSR1P43307 286 aaKnown RBP14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 TRERF1Q96PN7 1200 aa14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 TSG101Q99816 390 aa14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 CCDC196A0A1B0GTZ2 297 aa14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 CHL1O00533 1208 aa14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 BAG4O95429 457 aaKnown RBP14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 POTEJP0CG39 1038 aa14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 SNW1Q13573 536 aaKnown RBP14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 KRT24Q2M2I5 525 aa14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 C8orf37Q96NL8 207 aa14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 NUP88Q99567 741 aaPredicted RBP14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 PAXBP1Q9Y5B6 917 aa14.16□□□□□ -0.14
NPLOC4-202ENST00000374747 MROH1Q8NDA8 1641 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 ATP6V1AP38606 617 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 TBC1D9Q6ZT07 1266 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 SLAIN2Q9P270 581 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 PPP1R1BQ9UD71 204 aaPredicted RBP14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 ABCA9Q8IUA7 1624 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 ATP7BP35670 1465 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 GCOM1H8Y6P7 765 aaPredicted RBP14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 MYZAPP0CAP1 466 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 RPGRQ92834 1020 aaKnown RBP14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 FAM135BQ49AJ0 1406 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 CAVIN2O95810 425 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 TMC6Q7Z403 805 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 ANKIB1Q9P2G1 1089 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 ZHX1Q9UKY1 873 aaPredicted RBP14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 TTF1Q15361 905 aaPredicted RBP14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 CCDC178Q5BJE1 867 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 FSIP1Q8NA03 581 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 PIBF1Q8WXW3 757 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 BTG4Q9NY30 223 aa14.15□□□□□ -0.14
NPLOC4-202ENST00000374747 FGFR1OPO95684 399 aaKnown RBP14.14□□□□□ -0.15
NPLOC4-202ENST00000374747 IBSPP21815 317 aaPredicted RBP14.14□□□□□ -0.15
NPLOC4-202ENST00000374747 CNNM3Q8NE01 707 aa14.14□□□□□ -0.15
NPLOC4-202ENST00000374747 ZBTB40Q9NUA8 1239 aa14.14□□□□□ -0.15
NPLOC4-202ENST00000374747 ZNF76P36508 570 aa14.14□□□□□ -0.15
NPLOC4-202ENST00000374747 NPHP4O75161 1426 aaPredicted RBP14.14□□□□□ -0.15
NPLOC4-202ENST00000374747 DDX21Q9NR30 783 aaKnown RBP eCLIP14.14□□□□□ -0.15
NPLOC4-202ENST00000374747 NAA15Q9BXJ9 866 aaKnown RBP14.14□□□□□ -0.15
NPLOC4-202ENST00000374747 VWDEQ8N2E2 1590 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 270.1 ms