RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 RFX5P48382 616 aaPredicted RBP18.08■□□□□ 0.48
RCC1-201ENST00000373831 PDZRN3Q9UPQ7 1066 aa18.08■□□□□ 0.48
RCC1-201ENST00000373831 NRXN2Q9P2S2 1712 aa18.08■□□□□ 0.48
RCC1-201ENST00000373831 EXOC6BQ9Y2D4 811 aa18.07■□□□□ 0.48
RCC1-201ENST00000373831 CARMIL3Q8ND23 1372 aa18.07■□□□□ 0.48
RCC1-201ENST00000373831 ABCC12Q96J65 1359 aa18.07■□□□□ 0.48
RCC1-201ENST00000373831 TAF1P21675 1872 aa18.07■□□□□ 0.48
RCC1-201ENST00000373831 CSF1RP07333 972 aa18.06■□□□□ 0.48
RCC1-201ENST00000373831 HCLS1P14317 486 aaPredicted RBP18.06■□□□□ 0.48
RCC1-201ENST00000373831 ERFEQ4G0M1 354 aa18.06■□□□□ 0.48
RCC1-201ENST00000373831 PA2G4Q9UQ80 394 aaKnown RBP18.06■□□□□ 0.48
RCC1-201ENST00000373831 SPEF2Q9C093 1822 aa18.06■□□□□ 0.48
RCC1-201ENST00000373831 CTSWP56202 376 aa18.05■□□□□ 0.48
RCC1-201ENST00000373831 NUCB1Q02818 461 aa18.05■□□□□ 0.48
RCC1-201ENST00000373831 DDR1Q08345 913 aa18.05■□□□□ 0.48
RCC1-201ENST00000373831 PDE8AO60658 829 aa18.04■□□□□ 0.48
RCC1-201ENST00000373831 NBPF5PQ86XG9 351 aaPredicted RBP18.04■□□□□ 0.48
RCC1-201ENST00000373831 TTLL11Q8NHH1 800 aa18.04■□□□□ 0.48
RCC1-201ENST00000373831 KLHDC4Q8TBB5 520 aa18.04■□□□□ 0.48
RCC1-201ENST00000373831 NOP58Q9Y2X3 529 aaKnown RBP18.04■□□□□ 0.48
RCC1-201ENST00000373831 COL4A1P02462 1669 aa18.04■□□□□ 0.48
RCC1-201ENST00000373831 ANKRD31Q8N7Z5 1873 aa18.04■□□□□ 0.48
RCC1-201ENST00000373831 SURF6O75683 361 aaKnown RBP18.04■□□□□ 0.48
RCC1-201ENST00000373831 SLC10A5Q5PT55 438 aa18.04■□□□□ 0.48
RCC1-201ENST00000373831 CCDC85AQ96PX6 553 aaPredicted RBP18.04■□□□□ 0.48
RCC1-201ENST00000373831 NYXQ9GZU5 481 aa18.04■□□□□ 0.48
RCC1-201ENST00000373831 POLRMTO00411 1230 aaKnown RBP18.03■□□□□ 0.48
RCC1-201ENST00000373831 YBX3P16989 372 aaKnown RBP eCLIP18.03■□□□□ 0.488e-7■□□□□ 9
RCC1-201ENST00000373831 PTPN12Q05209 780 aaKnown RBP18.03■□□□□ 0.48
RCC1-201ENST00000373831 FAM161AQ3B820 660 aa18.03■□□□□ 0.48
RCC1-201ENST00000373831 ANKRD45Q5TZF3 282 aa18.03■□□□□ 0.48
RCC1-201ENST00000373831 C3orf67Q6ZVT6 689 aa18.03■□□□□ 0.48
RCC1-201ENST00000373831 CCDC24Q8N4L8 307 aa18.03■□□□□ 0.48
RCC1-201ENST00000373831 CHMP3Q9Y3E7 222 aa18.03■□□□□ 0.48
RCC1-201ENST00000373831 APBB1O00213 710 aa18.02■□□□□ 0.48
RCC1-201ENST00000373831 TPTE2Q6XPS3 522 aa18.02■□□□□ 0.48
RCC1-201ENST00000373831 CHD1LQ86WJ1 897 aa18.02■□□□□ 0.48
RCC1-201ENST00000373831 NLGN1Q8N2Q7 840 aa18.02■□□□□ 0.48
RCC1-201ENST00000373831 GREM2Q9H772 168 aa18.02■□□□□ 0.48
RCC1-201ENST00000373831 COPRSQ9NQ92 184 aa18.02■□□□□ 0.48
RCC1-201ENST00000373831 SMARCA5O60264 1052 aaPredicted RBP18.01■□□□□ 0.47
RCC1-201ENST00000373831 PDE4AP27815 886 aa18.01■□□□□ 0.47
RCC1-201ENST00000373831 CHD4Q14839 1912 aa18.01■□□□□ 0.47
RCC1-201ENST00000373831 SERPINB2P05120 415 aa18■□□□□ 0.47
RCC1-201ENST00000373831 PRR5LQ6MZQ0 368 aa18■□□□□ 0.47
RCC1-201ENST00000373831 ZNF594Q96JF6 807 aaPredicted RBP18■□□□□ 0.47
RCC1-201ENST00000373831 LNPKQ9C0E8 428 aa18■□□□□ 0.47
RCC1-201ENST00000373831 GRIN3BO60391 1043 aa18■□□□□ 0.47
RCC1-201ENST00000373831 GTF2E1P29083 439 aaPredicted RBP18■□□□□ 0.47
RCC1-201ENST00000373831 C1QTNF8P60827 252 aa18■□□□□ 0.47
RCC1-201ENST00000373831 CNBD1Q8NA66 436 aa18■□□□□ 0.47
RCC1-201ENST00000373831 SIL1Q9H173 461 aa18■□□□□ 0.47
RCC1-201ENST00000373831 CD2APQ9Y5K6 639 aa18■□□□□ 0.47
RCC1-201ENST00000373831 GOLGB1Q14789 3259 aaKnown RBP18■□□□□ 0.47
RCC1-201ENST00000373831 RIC1Q4ADV7 1423 aa17.99■□□□□ 0.47
RCC1-201ENST00000373831 ITGA6P23229 1130 aa17.99■□□□□ 0.47
RCC1-201ENST00000373831 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.99■□□□□ 0.47
RCC1-201ENST00000373831 RTL9Q8NET4 1388 aa17.99■□□□□ 0.47
RCC1-201ENST00000373831 A0A1B0GUL6 1792 aa17.99■□□□□ 0.47
RCC1-201ENST00000373831 RAB11FIP3O75154 756 aa17.98■□□□□ 0.47
RCC1-201ENST00000373831 MMP10P09238 476 aa17.98■□□□□ 0.47
RCC1-201ENST00000373831 HSP90B1P14625 803 aaKnown RBP17.98■□□□□ 0.47
RCC1-201ENST00000373831 IFIT5Q13325 482 aaKnown RBP17.98■□□□□ 0.47
RCC1-201ENST00000373831 SF3B3Q15393 1217 aaKnown RBP17.98■□□□□ 0.47
RCC1-201ENST00000373831 CCDC57Q2TAC2 916 aa17.98■□□□□ 0.47
RCC1-201ENST00000373831 RHPN1Q8TCX5 695 aa17.98■□□□□ 0.47
RCC1-201ENST00000373831 LRRCC1Q9C099 1032 aa17.98■□□□□ 0.47
RCC1-201ENST00000373831 SASH1O94885 1247 aa17.97■□□□□ 0.47
RCC1-201ENST00000373831 HSP90AB4PQ58FF6 505 aa17.97■□□□□ 0.47
RCC1-201ENST00000373831 ATG9AQ7Z3C6 839 aa17.97■□□□□ 0.47
RCC1-201ENST00000373831 C16orf71Q8IYS4 520 aaPredicted RBP17.97■□□□□ 0.47
RCC1-201ENST00000373831 SEC31BQ9NQW1 1179 aa17.97■□□□□ 0.47
RCC1-201ENST00000373831 RGS3P49796 1198 aa17.96■□□□□ 0.47
RCC1-201ENST00000373831 PUS3Q9BZE2 481 aaKnown RBP17.96■□□□□ 0.47
RCC1-201ENST00000373831 COL11A2P13942 1736 aaPredicted RBP17.96■□□□□ 0.47
RCC1-201ENST00000373831 ANKRD18BA2A2Z9 1011 aa17.96■□□□□ 0.46
RCC1-201ENST00000373831 G3BP1Q13283 466 aaKnown RBP eCLIP17.96■□□□□ 0.46
RCC1-201ENST00000373831 CCDC152Q4G0S7 254 aa17.96■□□□□ 0.46
RCC1-201ENST00000373831 LRRC24Q50LG9 513 aa17.96■□□□□ 0.46
RCC1-201ENST00000373831 OTUD7AQ8TE49 926 aaPredicted RBP17.96■□□□□ 0.46
RCC1-201ENST00000373831 KIF1BPQ96EK5 621 aa17.96■□□□□ 0.46
RCC1-201ENST00000373831 IL1RAPL2Q9NP60 686 aa17.96■□□□□ 0.46
RCC1-201ENST00000373831 NPHP1O15259 732 aa17.95■□□□□ 0.46
RCC1-201ENST00000373831 OS9Q13438 667 aaPredicted RBP17.95■□□□□ 0.46
RCC1-201ENST00000373831 NLRP3Q96P20 1036 aa17.95■□□□□ 0.46
RCC1-201ENST00000373831 EYA2O00167 538 aa17.94■□□□□ 0.46
RCC1-201ENST00000373831 CIAO1O76071 339 aa17.94■□□□□ 0.46
RCC1-201ENST00000373831 ERC1Q8IUD2 1116 aa17.94■□□□□ 0.46
RCC1-201ENST00000373831 BCL11AQ9H165 835 aa17.94■□□□□ 0.46
RCC1-201ENST00000373831 ST5P78524 1137 aa17.93■□□□□ 0.46
RCC1-201ENST00000373831 WWC3Q9ULE0 1092 aa17.93■□□□□ 0.46
RCC1-201ENST00000373831 PARP3Q9Y6F1 533 aa17.93■□□□□ 0.46
RCC1-201ENST00000373831 SALL3Q9BXA9 1300 aa17.92■□□□□ 0.46
RCC1-201ENST00000373831 FBXO3Q9UK99 471 aa17.92■□□□□ 0.46
RCC1-201ENST00000373831 RIPOR2Q9Y4F9 1068 aa17.92■□□□□ 0.46
RCC1-201ENST00000373831 IL15P40933 162 aaPredicted RBP17.91■□□□□ 0.46
RCC1-201ENST00000373831 TFCP2Q12800 502 aa17.91■□□□□ 0.46
RCC1-201ENST00000373831 CRY2Q49AN0 593 aa17.91■□□□□ 0.46
RCC1-201ENST00000373831 TAF7LQ5H9L4 462 aa17.91■□□□□ 0.46
RCC1-201ENST00000373831 PLEKHM2Q8IWE5 1019 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms