RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 CCDC152Q4G0S7 254 aa23.92■■□□□ 1.42
COL16A1-201ENST00000373667 LAMB2P55268 1798 aa23.91■■□□□ 1.42
COL16A1-201ENST00000373667 YBX3P16989 372 aaKnown RBP eCLIP23.91■■□□□ 1.42
COL16A1-201ENST00000373667 ITPRIPQ8IWB1 547 aa23.91■■□□□ 1.42
COL16A1-201ENST00000373667 SUCLG2Q96I99 432 aa23.91■■□□□ 1.42
COL16A1-201ENST00000373667 CRAMP1Q96RY5 1269 aa23.91■■□□□ 1.42
COL16A1-201ENST00000373667 UTYO14607 1347 aa23.9■■□□□ 1.42
COL16A1-201ENST00000373667 UBTFL1P0CB47 393 aaPredicted RBP23.9■■□□□ 1.42
COL16A1-201ENST00000373667 PRPF40BQ6NWY9 871 aaKnown RBP23.9■■□□□ 1.42
COL16A1-201ENST00000373667 TTLL11Q8NHH1 800 aa23.9■■□□□ 1.42
COL16A1-201ENST00000373667 PLA2G12BQ9BX93 195 aa23.9■■□□□ 1.42
COL16A1-201ENST00000373667 CHMP3Q9Y3E7 222 aa23.9■■□□□ 1.42
COL16A1-201ENST00000373667 DLEC1Q9Y238 1755 aa23.9■■□□□ 1.42
COL16A1-201ENST00000373667 FOXO4P98177 505 aa23.89■■□□□ 1.41
COL16A1-201ENST00000373667 MEIS3Q99687 375 aa23.89■■□□□ 1.41
COL16A1-201ENST00000373667 CACNA1SQ13698 1873 aa23.88■■□□□ 1.41
COL16A1-201ENST00000373667 C21orf2O43822 256 aa23.88■■□□□ 1.41
COL16A1-201ENST00000373667 EPHA10Q5JZY3 1008 aa23.88■■□□□ 1.41
COL16A1-201ENST00000373667 LMBR1LQ6UX01 489 aa23.88■■□□□ 1.41
COL16A1-201ENST00000373667 SEC31BQ9NQW1 1179 aa23.88■■□□□ 1.41
COL16A1-201ENST00000373667 BRCA1P38398 1863 aaKnown RBP23.87■■□□□ 1.41
COL16A1-201ENST00000373667 GNAI3P08754 354 aa23.87■■□□□ 1.41
COL16A1-201ENST00000373667 GREM2Q9H772 168 aa23.87■■□□□ 1.41
COL16A1-201ENST00000373667 HDAC5Q9UQL6 1122 aa23.87■■□□□ 1.41
COL16A1-201ENST00000373667 SLX4Q8IY92 1834 aa23.87■■□□□ 1.41
COL16A1-201ENST00000373667 GRIN3BO60391 1043 aa23.86■■□□□ 1.41
COL16A1-201ENST00000373667 CSF1RP07333 972 aa23.86■■□□□ 1.41
COL16A1-201ENST00000373667 GRAPQ13588 217 aa23.86■■□□□ 1.41
COL16A1-201ENST00000373667 ARHGAP27Q6ZUM4 889 aa23.86■■□□□ 1.41
COL16A1-201ENST00000373667 GRAPLQ8TC17 118 aaPredicted RBP23.86■■□□□ 1.41
COL16A1-201ENST00000373667 MYH3P11055 1940 aa23.85■■□□□ 1.41
COL16A1-201ENST00000373667 PPEF1O14829 653 aaPredicted RBP23.85■■□□□ 1.41
COL16A1-201ENST00000373667 BBOX1O75936 387 aa23.85■■□□□ 1.41
COL16A1-201ENST00000373667 RRP1P56182 461 aaKnown RBP23.85■■□□□ 1.41
COL16A1-201ENST00000373667 C20orf194Q5TEA3 1177 aa23.85■■□□□ 1.41
COL16A1-201ENST00000373667 CELF1Q92879 486 aaKnown RBP23.85■■□□□ 1.41
COL16A1-201ENST00000373667 KAZALD1Q96I82 304 aa23.85■■□□□ 1.41
COL16A1-201ENST00000373667 BICC1Q9H694 974 aaKnown RBP23.85■■□□□ 1.41
COL16A1-201ENST00000373667 COG6Q9Y2V7 657 aa23.85■■□□□ 1.41
COL16A1-201ENST00000373667 TAF1P21675 1872 aa23.84■■□□□ 1.41
COL16A1-201ENST00000373667 RPS8P62241 208 aaKnown RBP23.84■■□□□ 1.41
COL16A1-201ENST00000373667 PDE3AQ14432 1141 aa23.84■■□□□ 1.41
COL16A1-201ENST00000373667 FAM161AQ3B820 660 aa23.84■■□□□ 1.41
COL16A1-201ENST00000373667 TMX4Q9H1E5 349 aaPredicted RBP23.84■■□□□ 1.41
COL16A1-201ENST00000373667 ITGA6P23229 1130 aa23.83■■□□□ 1.41
COL16A1-201ENST00000373667 LRRFIP2Q9Y608 721 aaKnown RBP23.83■■□□□ 1.41
COL16A1-201ENST00000373667 ANKRD18BA2A2Z9 1011 aa23.82■■□□□ 1.4
COL16A1-201ENST00000373667 IFIT5Q13325 482 aaKnown RBP23.82■■□□□ 1.4
COL16A1-201ENST00000373667 CCDC57Q2TAC2 916 aa23.82■■□□□ 1.4
COL16A1-201ENST00000373667 OLFM4Q6UX06 510 aa23.82■■□□□ 1.4
COL16A1-201ENST00000373667 ANKRD18AQ8IVF6 992 aa23.82■■□□□ 1.4
COL16A1-201ENST00000373667 CDC5LQ99459 802 aaKnown RBP23.82■■□□□ 1.4
COL16A1-201ENST00000373667 ZBTB7BO15156 539 aaPredicted RBP23.81■■□□□ 1.4
COL16A1-201ENST00000373667 GNAI2P04899 355 aa23.81■■□□□ 1.4
COL16A1-201ENST00000373667 MVPQ14764 893 aaKnown RBP23.81■■□□□ 1.4
COL16A1-201ENST00000373667 TAF7LQ5H9L4 462 aa23.81■■□□□ 1.4
COL16A1-201ENST00000373667 C7orf43Q8WVR3 580 aa23.81■■□□□ 1.4
COL16A1-201ENST00000373667 SUPT16HQ9Y5B9 1047 aaKnown RBP23.81■■□□□ 1.4
COL16A1-201ENST00000373667 ARFGEF1Q9Y6D6 1849 aa23.8■■□□□ 1.4
COL16A1-201ENST00000373667 SOGA3Q5TF21 947 aa23.8■■□□□ 1.4
COL16A1-201ENST00000373667 ANKRD44Q8N8A2 993 aa23.8■■□□□ 1.4
COL16A1-201ENST00000373667 RTL9Q8NET4 1388 aa23.79■■□□□ 1.4
COL16A1-201ENST00000373667 IGHMBP2P38935 993 aaKnown RBP23.79■■□□□ 1.4
COL16A1-201ENST00000373667 CCDC93Q567U6 631 aa23.79■■□□□ 1.4
COL16A1-201ENST00000373667 SP8Q8IXZ3 490 aa23.79■■□□□ 1.4
COL16A1-201ENST00000373667 ATP6V0A2Q9Y487 856 aa23.79■■□□□ 1.4
COL16A1-201ENST00000373667 RABL6Q3YEC7 729 aaPredicted RBP23.78■■□□□ 1.4
COL16A1-201ENST00000373667 CC2D2BQ6DHV5 1058 aa23.78■■□□□ 1.4
COL16A1-201ENST00000373667 TMC4Q7Z404 712 aa23.78■■□□□ 1.4
COL16A1-201ENST00000373667 SLC51AQ86UW1 340 aa23.78■■□□□ 1.4
COL16A1-201ENST00000373667 DDX19BQ9UMR2 479 aa23.78■■□□□ 1.4
COL16A1-201ENST00000373667 ZNF594Q96JF6 807 aaPredicted RBP23.77■■□□□ 1.4
COL16A1-201ENST00000373667 MPHOSPH8Q99549 860 aa23.77■■□□□ 1.4
COL16A1-201ENST00000373667 RTKN2Q8IZC4 609 aa23.76■■□□□ 1.39
COL16A1-201ENST00000373667 C1orf115Q9H7X2 142 aa23.76■■□□□ 1.39
COL16A1-201ENST00000373667 CHMP4BQ9H444 224 aaKnown RBP23.75■■□□□ 1.39
COL16A1-201ENST00000373667 COL4A1P02462 1669 aa23.75■■□□□ 1.39
COL16A1-201ENST00000373667 RASSF7Q02833 373 aa23.74■■□□□ 1.39
COL16A1-201ENST00000373667 MPNDQ8N594 471 aa23.74■■□□□ 1.39
COL16A1-201ENST00000373667 BSDC1Q9NW68 430 aaPredicted RBP23.74■■□□□ 1.39
COL16A1-201ENST00000373667 DPP8Q6V1X1 898 aaPredicted RBP23.73■■□□□ 1.39
COL16A1-201ENST00000373667 LDHAL6AQ6ZMR3 332 aa23.73■■□□□ 1.39
COL16A1-201ENST00000373667 NSFL1CQ9UNZ2 370 aaKnown RBP23.73■■□□□ 1.39
COL16A1-201ENST00000373667 NFKBIEO00221 500 aa23.72■■□□□ 1.39
COL16A1-201ENST00000373667 GRIPAP1Q4V328 841 aa23.72■■□□□ 1.39
COL16A1-201ENST00000373667 TAOK3Q9H2K8 898 aa23.72■■□□□ 1.39
COL16A1-201ENST00000373667 CNNM1Q9NRU3 951 aa23.72■■□□□ 1.39
COL16A1-201ENST00000373667 ANKIB1Q9P2G1 1089 aa23.72■■□□□ 1.39
COL16A1-201ENST00000373667 SPEF2Q9C093 1822 aa23.72■■□□□ 1.39
COL16A1-201ENST00000373667 GOLGB1Q14789 3259 aaKnown RBP23.71■■□□□ 1.39
COL16A1-201ENST00000373667 SRGAP3O43295 1099 aa23.71■■□□□ 1.39
COL16A1-201ENST00000373667 GPSM2P81274 684 aa23.71■■□□□ 1.39
COL16A1-201ENST00000373667 FKBP4Q02790 459 aaKnown RBP eCLIP23.71■■□□□ 1.39
COL16A1-201ENST00000373667 KLHDC4Q8TBB5 520 aa23.71■■□□□ 1.39
COL16A1-201ENST00000373667 MINPP1Q9UNW1 487 aa23.71■■□□□ 1.39
COL16A1-201ENST00000373667 CRBNQ96SW2 442 aa23.7■■□□□ 1.38
COL16A1-201ENST00000373667 ZBTB40Q9NUA8 1239 aa23.7■■□□□ 1.38
COL16A1-201ENST00000373667 C6orf229H3BNL8 230 aa23.69■■□□□ 1.38
COL16A1-201ENST00000373667 PUS3Q9BZE2 481 aaKnown RBP23.69■■□□□ 1.38
COL16A1-201ENST00000373667 ZNF277Q9NRM2 450 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms