RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 UBE3BQ7Z3V4 1068 aa15□□□□□ -0.01
TSPAN6-201ENST00000373020 CADPS2Q86UW7 1296 aa15□□□□□ -0.01
TSPAN6-201ENST00000373020 FAM184AQ8NB25 1140 aa15□□□□□ -0.01
TSPAN6-201ENST00000373020 ZNF500O60304 480 aaPredicted RBP15□□□□□ -0.01
TSPAN6-201ENST00000373020 TFCP2Q12800 502 aa15□□□□□ -0.01
TSPAN6-201ENST00000373020 ANKRD1Q15327 319 aa15□□□□□ -0.01
TSPAN6-201ENST00000373020 SHANK3Q9BYB0 1731 aa14.99□□□□□ -0.01
TSPAN6-201ENST00000373020 ZNF609O15014 1411 aa14.99□□□□□ -0.01
TSPAN6-201ENST00000373020 PIP4K2AP48426 406 aaPredicted RBP14.99□□□□□ -0.01
TSPAN6-201ENST00000373020 CABP4P57796 275 aa14.99□□□□□ -0.01
TSPAN6-201ENST00000373020 CSPP1Q1MSJ5 1256 aa14.99□□□□□ -0.01
TSPAN6-201ENST00000373020 BLOC1S2Q6QNY1 142 aa14.99□□□□□ -0.01
TSPAN6-201ENST00000373020 RNF214Q8ND24 703 aa14.99□□□□□ -0.01
TSPAN6-201ENST00000373020 TAF6LQ9Y6J9 622 aa14.99□□□□□ -0.01
TSPAN6-201ENST00000373020 LETM1O95202 739 aaPredicted RBP14.98□□□□□ -0.01
TSPAN6-201ENST00000373020 MCM5P33992 734 aa14.98□□□□□ -0.01
TSPAN6-201ENST00000373020 TOB2Q14106 344 aaPredicted RBP14.98□□□□□ -0.01
TSPAN6-201ENST00000373020 UVSSAQ2YD98 709 aa14.98□□□□□ -0.01
TSPAN6-201ENST00000373020 DDX54Q8TDD1 881 aaKnown RBP14.98□□□□□ -0.01
TSPAN6-201ENST00000373020 ZKSCAN5Q9Y2L8 839 aa14.98□□□□□ -0.01
TSPAN6-201ENST00000373020 A0A087WZG4 1122 aa14.98□□□□□ -0.01
TSPAN6-201ENST00000373020 FIBPO43427 364 aa14.98□□□□□ -0.01
TSPAN6-201ENST00000373020 OFD1O75665 1012 aa14.98□□□□□ -0.01
TSPAN6-201ENST00000373020 NECAB1Q8N987 351 aa14.98□□□□□ -0.01
TSPAN6-201ENST00000373020 EDC3Q96F86 508 aaKnown RBP14.98□□□□□ -0.01
TSPAN6-201ENST00000373020 HAUS7Q99871 368 aa14.98□□□□□ -0.01
TSPAN6-201ENST00000373020 NBPF26B4DH59 902 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 H7C1W4 665 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 DNM1Q05193 864 aaKnown RBP14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 NBPF14Q5TI25 921 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 NBPF10Q6P3W6 841 aaKnown RBP14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 NBPF15Q8N660 670 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 CCDC39Q9UFE4 941 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 TNS2Q63HR2 1409 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 PALLDQ8WX93 1383 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 ABCA3Q99758 1704 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 ATP5J2-PTCD1G3V325 749 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 PTCD1O75127 700 aaKnown RBP14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 KRT32Q14532 448 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 JARID2Q92833 1246 aaPredicted RBP14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 DBNDD2Q9BQY9 259 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 FUCA2Q9BTY2 467 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 PCDH11XQ9BZA7 1347 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 PCDH11YQ9BZA8 1340 aa14.97□□□□□ -0.01
TSPAN6-201ENST00000373020 SPEF2Q9C093 1822 aa14.96□□□□□ -0.01
TSPAN6-201ENST00000373020 FOXO4P98177 505 aa14.96□□□□□ -0.01
TSPAN6-201ENST00000373020 WDR17Q8IZU2 1322 aa14.96□□□□□ -0.01
TSPAN6-201ENST00000373020 PDCP20941 246 aa14.96□□□□□ -0.02
TSPAN6-201ENST00000373020 TICAM2Q86XR7 235 aa14.96□□□□□ -0.02
TSPAN6-201ENST00000373020 GPR108Q9NPR9 543 aa14.96□□□□□ -0.02
TSPAN6-201ENST00000373020 ELP1O95163 1332 aa14.95□□□□□ -0.02
TSPAN6-201ENST00000373020 SH3TC1Q8TE82 1336 aa14.95□□□□□ -0.02
TSPAN6-201ENST00000373020 COL5A2P05997 1499 aaPredicted RBP14.95□□□□□ -0.02
TSPAN6-201ENST00000373020 VPS37CA5D8V6 355 aaPredicted RBP14.95□□□□□ -0.02
TSPAN6-201ENST00000373020 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.95□□□□□ -0.02
TSPAN6-201ENST00000373020 LARP1BQ659C4 914 aaKnown RBP14.94□□□□□ -0.02
TSPAN6-201ENST00000373020 LMBR1LQ6UX01 489 aa14.94□□□□□ -0.02
TSPAN6-201ENST00000373020 CDC37L1Q7L3B6 337 aa14.94□□□□□ -0.02
TSPAN6-201ENST00000373020 ATG9AQ7Z3C6 839 aa14.94□□□□□ -0.02
TSPAN6-201ENST00000373020 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
TSPAN6-201ENST00000373020 LAMA4Q16363 1823 aa14.94□□□□□ -0.02
TSPAN6-201ENST00000373020 ERVV-2B6SEH9 535 aa14.94□□□□□ -0.02
TSPAN6-201ENST00000373020 NKX1-1Q15270 411 aaPredicted RBP14.94□□□□□ -0.02
TSPAN6-201ENST00000373020 KBTBD3Q8NAB2 608 aa14.94□□□□□ -0.02
TSPAN6-201ENST00000373020 TCEANC2Q96MN5 208 aa14.94□□□□□ -0.02
TSPAN6-201ENST00000373020 DTNBO60941 627 aa14.93□□□□□ -0.02
TSPAN6-201ENST00000373020 TOGARAM1Q9Y4F4 1720 aa14.93□□□□□ -0.02
TSPAN6-201ENST00000373020 TPM2P07951 284 aa14.93□□□□□ -0.02
TSPAN6-201ENST00000373020 TERF1P54274 439 aa14.93□□□□□ -0.02
TSPAN6-201ENST00000373020 MCMDC2Q4G0Z9 681 aa14.93□□□□□ -0.02
TSPAN6-201ENST00000373020 TTLL7Q6ZT98 887 aa14.93□□□□□ -0.02
TSPAN6-201ENST00000373020 GTF3C6Q969F1 213 aa14.93□□□□□ -0.02
TSPAN6-201ENST00000373020 CWC25Q9NXE8 425 aaPredicted RBP14.93□□□□□ -0.02
TSPAN6-201ENST00000373020 KRT85P78386 507 aa14.92□□□□□ -0.02
TSPAN6-201ENST00000373020 TTC6Q86TZ1 520 aa14.92□□□□□ -0.02
TSPAN6-201ENST00000373020 ZCRB1Q8TBF4 217 aaKnown RBP14.92□□□□□ -0.02
TSPAN6-201ENST00000373020 NEK1Q96PY6 1258 aa14.92□□□□□ -0.02
TSPAN6-201ENST00000373020 DNAJC2Q99543 621 aaKnown RBP14.92□□□□□ -0.02
TSPAN6-201ENST00000373020 NDUFB9Q9Y6M9 179 aa14.92□□□□□ -0.02
TSPAN6-201ENST00000373020 CYP21A2P08686 494 aa14.92□□□□□ -0.02
TSPAN6-201ENST00000373020 BRINP3Q76B58 766 aa14.92□□□□□ -0.02
TSPAN6-201ENST00000373020 CHGBP05060 677 aa14.91□□□□□ -0.02
TSPAN6-201ENST00000373020 HCLS1P14317 486 aaPredicted RBP14.91□□□□□ -0.02
TSPAN6-201ENST00000373020 CCDC129Q6ZRS4 1044 aa14.91□□□□□ -0.02
TSPAN6-201ENST00000373020 DDX46Q7L014 1031 aaKnown RBP14.91□□□□□ -0.02
TSPAN6-201ENST00000373020 CCDC191Q8NCU4 936 aa14.91□□□□□ -0.02
TSPAN6-201ENST00000373020 SEC62Q99442 399 aaKnown RBP14.91□□□□□ -0.02
TSPAN6-201ENST00000373020 IL15P40933 162 aaPredicted RBP14.9□□□□□ -0.02
TSPAN6-201ENST00000373020 ATG3Q9NT62 314 aa14.9□□□□□ -0.02
TSPAN6-201ENST00000373020 CIAO1O76071 339 aa14.9□□□□□ -0.02
TSPAN6-201ENST00000373020 HELLSQ9NRZ9 838 aa14.9□□□□□ -0.02
TSPAN6-201ENST00000373020 SOS2Q07890 1332 aaPredicted RBP14.89□□□□□ -0.03
TSPAN6-201ENST00000373020 GIMAP6Q6P9H5 292 aa14.89□□□□□ -0.03
TSPAN6-201ENST00000373020 DSCC1Q9BVC3 393 aa14.89□□□□□ -0.03
TSPAN6-201ENST00000373020 USP25Q9UHP3 1055 aa14.89□□□□□ -0.03
TSPAN6-201ENST00000373020 MYH15Q9Y2K3 1946 aa14.89□□□□□ -0.03
TSPAN6-201ENST00000373020 EYA2O00167 538 aa14.89□□□□□ -0.03
TSPAN6-201ENST00000373020 ZMYM1Q5SVZ6 1142 aa14.89□□□□□ -0.03
TSPAN6-201ENST00000373020 STOX1Q6ZVD7 989 aa14.89□□□□□ -0.03
TSPAN6-201ENST00000373020 FERMT3Q86UX7 667 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms