RNA–Protein interactions for RNA: ENST00000372638.3

CITED4-201, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4, humanhuman

APPRIS P1 BASIC

Gene CITED4, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4-201ENST00000372638 BEND3Q5T5X7 828 aa29.96■■■□□ 2.39
CITED4-201ENST00000372638 ATP6V0A2Q9Y487 856 aa29.96■■■□□ 2.39
CITED4-201ENST00000372638 GPBP1L1Q9HC44 474 aaPredicted RBP29.95■■■□□ 2.38
CITED4-201ENST00000372638 ZC3H4Q9UPT8 1303 aaKnown RBP29.95■■■□□ 2.38
CITED4-201ENST00000372638 PTPRCP08575 1304 aa29.94■■■□□ 2.38
CITED4-201ENST00000372638 UBE3BQ7Z3V4 1068 aa29.94■■■□□ 2.38
CITED4-201ENST00000372638 TMC4Q7Z404 712 aa29.94■■■□□ 2.38
CITED4-201ENST00000372638 SP8Q8IXZ3 490 aa29.94■■■□□ 2.38
CITED4-201ENST00000372638 ZNF526Q8TF50 670 aaPredicted RBP29.94■■■□□ 2.38
CITED4-201ENST00000372638 BCL2L13Q9BXK5 485 aa29.94■■■□□ 2.38
CITED4-201ENST00000372638 SMC4Q9NTJ3 1288 aa29.94■■■□□ 2.38
CITED4-201ENST00000372638 CCDC152Q4G0S7 254 aa29.93■■■□□ 2.38
CITED4-201ENST00000372638 SLC4A10Q6U841 1118 aa29.93■■■□□ 2.38
CITED4-201ENST00000372638 PSMD1Q99460 953 aa29.92■■■□□ 2.38
CITED4-201ENST00000372638 TAF1P21675 1872 aa29.91■■■□□ 2.38
CITED4-201ENST00000372638 DICER1Q9UPY3 1922 aaKnown RBP29.9■■■□□ 2.38
CITED4-201ENST00000372638 SNED1Q8TER0 1413 aa29.9■■■□□ 2.38
CITED4-201ENST00000372638 ZBED9Q6R2W3 1325 aa29.9■■■□□ 2.38
CITED4-201ENST00000372638 ALDH1L1O75891 902 aa29.9■■■□□ 2.38
CITED4-201ENST00000372638 CELF1Q92879 486 aaKnown RBP29.9■■■□□ 2.38
CITED4-201ENST00000372638 SRCIN1Q9C0H9 1055 aa29.9■■■□□ 2.38
CITED4-201ENST00000372638 ZNF277Q9NRM2 450 aaPredicted RBP29.9■■■□□ 2.38
CITED4-201ENST00000372638 CTSWP56202 376 aa29.89■■■□□ 2.38
CITED4-201ENST00000372638 RPS8P62241 208 aaKnown RBP29.89■■■□□ 2.38
CITED4-201ENST00000372638 CASP7P55210 303 aa29.88■■■□□ 2.37
CITED4-201ENST00000372638 PLA2G12BQ9BX93 195 aa29.88■■■□□ 2.37
CITED4-201ENST00000372638 TTLL11Q8NHH1 800 aa29.87■■■□□ 2.37
CITED4-201ENST00000372638 CCDC85AQ96PX6 553 aaPredicted RBP29.87■■■□□ 2.37
CITED4-201ENST00000372638 SEC31BQ9NQW1 1179 aa29.87■■■□□ 2.37
CITED4-201ENST00000372638 KDM2BQ8NHM5 1336 aa29.86■■■□□ 2.37
CITED4-201ENST00000372638 IARSP41252 1262 aaKnown RBP29.86■■■□□ 2.37
CITED4-201ENST00000372638 RARSP54136 660 aaKnown RBP29.86■■■□□ 2.37
CITED4-201ENST00000372638 BRPF1P55201 1214 aaPredicted RBP29.86■■■□□ 2.37
CITED4-201ENST00000372638 SLC51AQ86UW1 340 aa29.86■■■□□ 2.37
CITED4-201ENST00000372638 MPNDQ8N594 471 aa29.85■■■□□ 2.37
CITED4-201ENST00000372638 C9orf78Q9NZ63 289 aaPredicted RBP29.85■■■□□ 2.37
CITED4-201ENST00000372638 MYH3P11055 1940 aa29.85■■■□□ 2.37
CITED4-201ENST00000372638 DPY19L2Q6NUT2 758 aa29.84■■■□□ 2.37
CITED4-201ENST00000372638 SUPT20HQ8NEM7 779 aa29.84■■■□□ 2.37
CITED4-201ENST00000372638 TIAM2Q8IVF5 1701 aa29.84■■■□□ 2.37
CITED4-201ENST00000372638 GLTPD2A6NH11 291 aa29.83■■■□□ 2.37
CITED4-201ENST00000372638 GRM8O00222 908 aa29.83■■■□□ 2.37
CITED4-201ENST00000372638 DPP8Q6V1X1 898 aaPredicted RBP29.83■■■□□ 2.37
CITED4-201ENST00000372638 RTFDC1Q9BY42 306 aaPredicted RBP29.82■■■□□ 2.36
CITED4-201ENST00000372638 NOB1Q9ULX3 412 aaKnown RBP29.82■■■□□ 2.36
CITED4-201ENST00000372638 RTL9Q8NET4 1388 aa29.81■■■□□ 2.36
CITED4-201ENST00000372638 ANKRD18AQ8IVF6 992 aa29.81■■■□□ 2.36
CITED4-201ENST00000372638 CDC5LQ99459 802 aaKnown RBP29.81■■■□□ 2.36
CITED4-201ENST00000372638 VPS33BQ9H267 617 aa29.81■■■□□ 2.36
CITED4-201ENST00000372638 GREM2Q9H772 168 aa29.81■■■□□ 2.36
CITED4-201ENST00000372638 CSF1RP07333 972 aa29.8■■■□□ 2.36
CITED4-201ENST00000372638 JDP2Q8WYK2 163 aa29.8■■■□□ 2.36
CITED4-201ENST00000372638 LARGE2Q8N3Y3 721 aa29.79■■■□□ 2.36
CITED4-201ENST00000372638 API5Q9BZZ5 524 aaKnown RBP29.79■■■□□ 2.36
CITED4-201ENST00000372638 NMRK2Q9NPI5 230 aa29.79■■■□□ 2.36
CITED4-201ENST00000372638 NSFL1CQ9UNZ2 370 aaKnown RBP29.79■■■□□ 2.36
CITED4-201ENST00000372638 COL4A1P02462 1669 aa29.78■■■□□ 2.36
CITED4-201ENST00000372638 LRRC37AA6NMS7 1700 aa29.77■■■□□ 2.36
CITED4-201ENST00000372638 KIF16BQ96L93 1317 aa29.77■■■□□ 2.36
CITED4-201ENST00000372638 KIF3CO14782 793 aa29.76■■■□□ 2.36
CITED4-201ENST00000372638 PPIP5K2O43314 1243 aa29.76■■■□□ 2.36
CITED4-201ENST00000372638 FOXO4P98177 505 aa29.76■■■□□ 2.36
CITED4-201ENST00000372638 GPSM2P81274 684 aa29.75■■■□□ 2.35
CITED4-201ENST00000372638 ARHGAP45Q92619 1136 aa29.75■■■□□ 2.35
CITED4-201ENST00000372638 RRAGCQ9HB90 399 aa29.75■■■□□ 2.35
CITED4-201ENST00000372638 FZD9O00144 591 aa29.74■■■□□ 2.35
CITED4-201ENST00000372638 ITGA6P23229 1130 aa29.74■■■□□ 2.35
CITED4-201ENST00000372638 UTYO14607 1347 aa29.74■■■□□ 2.35
CITED4-201ENST00000372638 NBPF7P0C2Y1 421 aaPredicted RBP29.73■■■□□ 2.35
CITED4-201ENST00000372638 CCT4P50991 539 aaKnown RBP29.73■■■□□ 2.35
CITED4-201ENST00000372638 AOC3Q16853 763 aa29.73■■■□□ 2.35
CITED4-201ENST00000372638 FAM161AQ3B820 660 aa29.73■■■□□ 2.35
CITED4-201ENST00000372638 BSDC1Q9NW68 430 aaPredicted RBP29.73■■■□□ 2.35
CITED4-201ENST00000372638 IPO8O15397 1037 aaKnown RBP29.72■■■□□ 2.35
CITED4-201ENST00000372638 IGHMBP2P38935 993 aaKnown RBP29.72■■■□□ 2.35
CITED4-201ENST00000372638 NIM1KQ8IY84 436 aa29.72■■■□□ 2.35
CITED4-201ENST00000372638 PODXL2Q9NZ53 605 aa29.72■■■□□ 2.35
CITED4-201ENST00000372638 ANKRD18BA2A2Z9 1011 aa29.71■■■□□ 2.35
CITED4-201ENST00000372638 C6orf229H3BNL8 230 aa29.71■■■□□ 2.35
CITED4-201ENST00000372638 BCAR3O75815 825 aa29.71■■■□□ 2.35
CITED4-201ENST00000372638 DDNO94850 711 aaPredicted RBP29.71■■■□□ 2.35
CITED4-201ENST00000372638 KIAA2012Q0VF49 1180 aa29.71■■■□□ 2.35
CITED4-201ENST00000372638 EPHA10Q5JZY3 1008 aa29.71■■■□□ 2.35
CITED4-201ENST00000372638 LMBR1LQ6UX01 489 aa29.71■■■□□ 2.35
CITED4-201ENST00000372638 ANKIB1Q9P2G1 1089 aa29.71■■■□□ 2.35
CITED4-201ENST00000372638 CHMP3Q9Y3E7 222 aa29.71■■■□□ 2.35
CITED4-201ENST00000372638 VEGFAP15692 232 aaPredicted RBP29.71■■■□□ 2.35
CITED4-201ENST00000372638 EIF6P56537 245 aaKnown RBP29.71■■■□□ 2.35
CITED4-201ENST00000372638 SUCLG2Q96I99 432 aa29.71■■■□□ 2.35
CITED4-201ENST00000372638 USP44Q9H0E7 712 aa29.71■■■□□ 2.35
CITED4-201ENST00000372638 IFIT5Q13325 482 aaKnown RBP29.7■■■□□ 2.34
CITED4-201ENST00000372638 WASHC4Q2M389 1173 aa29.7■■■□□ 2.34
CITED4-201ENST00000372638 TBC1D16Q8TBP0 767 aa29.7■■■□□ 2.34
CITED4-201ENST00000372638 EYA3Q99504 573 aa29.7■■■□□ 2.34
CITED4-201ENST00000372638 MPHOSPH8Q99549 860 aa29.7■■■□□ 2.34
CITED4-201ENST00000372638 POLLQ9UGP5 575 aa29.7■■■□□ 2.34
CITED4-201ENST00000372638 COL4A5P29400 1685 aa29.69■■■□□ 2.34
CITED4-201ENST00000372638 DUOX1Q9NRD9 1551 aa29.69■■■□□ 2.34
CITED4-201ENST00000372638 ZNF541Q9H0D2 1346 aa29.69■■■□□ 2.34
CITED4-201ENST00000372638 XDHP47989 1333 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms