RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 THSD7AQ9UPZ6 1657 aa30.25■■■□□ 2.43
CTSA-203ENST00000372459 FSD1Q9BTV5 496 aa30.24■■■□□ 2.43
CTSA-203ENST00000372459 PALD1Q9ULE6 856 aa30.24■■■□□ 2.43
CTSA-203ENST00000372459 DDIT3P35638 169 aa30.24■■■□□ 2.43
CTSA-203ENST00000372459 TAF7LQ5H9L4 462 aa30.24■■■□□ 2.43
CTSA-203ENST00000372459 IRS4O14654 1257 aaPredicted RBP30.23■■■□□ 2.43
CTSA-203ENST00000372459 AEBP2Q6ZN18 517 aaPredicted RBP30.23■■■□□ 2.43
CTSA-203ENST00000372459 SYNE4Q8N205 404 aa30.23■■■□□ 2.43
CTSA-203ENST00000372459 UBN2Q6ZU65 1347 aa30.23■■■□□ 2.43
CTSA-203ENST00000372459 PUS3Q9BZE2 481 aaKnown RBP30.23■■■□□ 2.43
CTSA-203ENST00000372459 MYH14Q7Z406 1995 aaKnown RBP30.22■■■□□ 2.43
CTSA-203ENST00000372459 COL5A3P25940 1745 aaPredicted RBP30.22■■■□□ 2.43
CTSA-203ENST00000372459 FRAT2O75474 233 aaPredicted RBP30.22■■■□□ 2.43
CTSA-203ENST00000372459 CTSWP56202 376 aa30.22■■■□□ 2.43
CTSA-203ENST00000372459 NEUROD6Q96NK8 337 aa30.22■■■□□ 2.43
CTSA-203ENST00000372459 CEP126Q9P2H0 1117 aa30.22■■■□□ 2.43
CTSA-203ENST00000372459 ZNF609O15014 1411 aa30.22■■■□□ 2.43
CTSA-203ENST00000372459 TTLL11Q8NHH1 800 aa30.21■■■□□ 2.43
CTSA-203ENST00000372459 CCDC85AQ96PX6 553 aaPredicted RBP30.21■■■□□ 2.43
CTSA-203ENST00000372459 CIZ1Q9ULV3 898 aaPredicted RBP30.21■■■□□ 2.43
CTSA-203ENST00000372459 PDE8AO60658 829 aa30.21■■■□□ 2.43
CTSA-203ENST00000372459 CAMTA2O94983 1202 aa30.21■■■□□ 2.43
CTSA-203ENST00000372459 IL27Q8NEV9 243 aa30.21■■■□□ 2.43
CTSA-203ENST00000372459 MYH3P11055 1940 aa30.2■■■□□ 2.43
CTSA-203ENST00000372459 HSPA1LP34931 641 aa30.2■■■□□ 2.43
CTSA-203ENST00000372459 NEK4P51957 841 aa30.2■■■□□ 2.43
CTSA-203ENST00000372459 HAUS7Q99871 368 aa30.2■■■□□ 2.43
CTSA-203ENST00000372459 GSE1Q14687 1217 aa30.19■■■□□ 2.42
CTSA-203ENST00000372459 TIMM10P62072 90 aa30.19■■■□□ 2.42
CTSA-203ENST00000372459 NMIQ13287 307 aaPredicted RBP30.19■■■□□ 2.42
CTSA-203ENST00000372459 RFX7Q2KHR2 1363 aa30.18■■■□□ 2.42
CTSA-203ENST00000372459 ITGA6P23229 1130 aa30.18■■■□□ 2.42
CTSA-203ENST00000372459 MCM2P49736 904 aa30.18■■■□□ 2.42
CTSA-203ENST00000372459 GJD4Q96KN9 370 aaPredicted RBP30.18■■■□□ 2.42
CTSA-203ENST00000372459 AK7Q96M32 723 aa30.18■■■□□ 2.42
CTSA-203ENST00000372459 AKAP2Q9Y2D5 859 aa30.18■■■□□ 2.42
CTSA-203ENST00000372459 A0A1B0GUL7 405 aa30.17■■■□□ 2.42
CTSA-203ENST00000372459 ANKRD18BA2A2Z9 1011 aa30.17■■■□□ 2.42
CTSA-203ENST00000372459 PARP10Q53GL7 1025 aa30.17■■■□□ 2.42
CTSA-203ENST00000372459 GREM2Q9H772 168 aa30.17■■■□□ 2.42
CTSA-203ENST00000372459 SNRKQ9NRH2 765 aa30.17■■■□□ 2.42
CTSA-203ENST00000372459 FAM227BQ96M60 508 aa30.17■■■□□ 2.42
CTSA-203ENST00000372459 DNAJC2Q99543 621 aaKnown RBP30.16■■■□□ 2.42
CTSA-203ENST00000372459 SUSD4Q5VX71 490 aa30.15■■■□□ 2.42
CTSA-203ENST00000372459 LINC00116Q8NCU8 138 aa30.15■■■□□ 2.42
CTSA-203ENST00000372459 EDC3Q96F86 508 aaKnown RBP30.15■■■□□ 2.42
CTSA-203ENST00000372459 FOXD4L1Q9NU39 408 aa30.15■■■□□ 2.42
CTSA-203ENST00000372459 AFF2P51816 1311 aa30.15■■■□□ 2.42
CTSA-203ENST00000372459 UTP14AQ9BVJ6 771 aaKnown RBP30.15■■■□□ 2.42
CTSA-203ENST00000372459 SH3TC1Q8TE82 1336 aa30.15■■■□□ 2.42
CTSA-203ENST00000372459 ZNF652Q9Y2D9 606 aa30.14■■■□□ 2.42
CTSA-203ENST00000372459 NHSQ6T4R5 1651 aa30.14■■■□□ 2.42
CTSA-203ENST00000372459 SNX14Q9Y5W7 946 aa30.14■■■□□ 2.41
CTSA-203ENST00000372459 CCDC171Q6TFL3 1326 aa30.13■■■□□ 2.41
CTSA-203ENST00000372459 A0A0D9SFI3 127 aa30.13■■■□□ 2.41
CTSA-203ENST00000372459 PTH1RQ03431 593 aa30.13■■■□□ 2.41
CTSA-203ENST00000372459 LDHAL6AQ6ZMR3 332 aa30.13■■■□□ 2.41
CTSA-203ENST00000372459 CNTNAP4Q9C0A0 1308 aa30.13■■■□□ 2.41
CTSA-203ENST00000372459 BTAF1O14981 1849 aa30.12■■■□□ 2.41
CTSA-203ENST00000372459 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.12■■■□□ 2.41
CTSA-203ENST00000372459 NIP7Q9Y221 180 aaKnown RBP eCLIP30.12■■■□□ 2.41
CTSA-203ENST00000372459 MED23Q9ULK4 1368 aa30.11■■■□□ 2.41
CTSA-203ENST00000372459 RIPOR2Q9Y4F9 1068 aa30.11■■■□□ 2.41
CTSA-203ENST00000372459 NDUFB9Q9Y6M9 179 aa30.11■■■□□ 2.41
CTSA-203ENST00000372459 BCORQ6W2J9 1755 aa30.1■■■□□ 2.41
CTSA-203ENST00000372459 HSP90B1P14625 803 aaKnown RBP30.1■■■□□ 2.41
CTSA-203ENST00000372459 CLEC4GQ6UXB4 293 aa30.1■■■□□ 2.41
CTSA-203ENST00000372459 PTF1AQ7RTS3 328 aa30.1■■■□□ 2.41
CTSA-203ENST00000372459 TICAM2Q86XR7 235 aa30.1■■■□□ 2.41
CTSA-203ENST00000372459 METTL24Q5JXM2 366 aa30.1■■■□□ 2.41
CTSA-203ENST00000372459 KBTBD3Q8NAB2 608 aa30.1■■■□□ 2.41
CTSA-203ENST00000372459 TRPC5Q9UL62 973 aaPredicted RBP30.1■■■□□ 2.41
CTSA-203ENST00000372459 ATRNO75882 1429 aa30.09■■■□□ 2.41
CTSA-203ENST00000372459 IFIT1P09914 478 aaKnown RBP30.09■■■□□ 2.41
CTSA-203ENST00000372459 CCDC158Q5M9N0 1113 aa30.09■■■□□ 2.41
CTSA-203ENST00000372459 DDX46Q7L014 1031 aaKnown RBP30.09■■■□□ 2.41
CTSA-203ENST00000372459 CNNM1Q9NRU3 951 aa30.09■■■□□ 2.41
CTSA-203ENST00000372459 PAG1Q9NWQ8 432 aa30.09■■■□□ 2.41
CTSA-203ENST00000372459 RIC1Q4ADV7 1423 aa30.09■■■□□ 2.41
CTSA-203ENST00000372459 MAP4K1Q92918 833 aa30.08■■■□□ 2.41
CTSA-203ENST00000372459 UPF3BQ9BZI7 483 aaKnown RBP30.08■■■□□ 2.41
CTSA-203ENST00000372459 FAM177BA6PVY3 158 aa30.08■■■□□ 2.41
CTSA-203ENST00000372459 ONECUT3O60422 494 aaPredicted RBP30.08■■■□□ 2.41
CTSA-203ENST00000372459 GORABQ5T7V8 394 aa30.08■■■□□ 2.41
CTSA-203ENST00000372459 RASEFQ8IZ41 740 aa30.08■■■□□ 2.41
CTSA-203ENST00000372459 KCNB2Q92953 911 aa30.08■■■□□ 2.41
CTSA-203ENST00000372459 XAGE2Q96GT9 111 aa30.08■■■□□ 2.41
CTSA-203ENST00000372459 RC3H1Q5TC82 1133 aaKnown RBP30.07■■■□□ 2.4
CTSA-203ENST00000372459 CWC22Q9HCG8 908 aaKnown RBP30.07■■■□□ 2.4
CTSA-203ENST00000372459 SPEF2Q9C093 1822 aa30.06■■■□□ 2.4
CTSA-203ENST00000372459 HCLS1P14317 486 aaPredicted RBP30.06■■■□□ 2.4
CTSA-203ENST00000372459 RAB3GAP1Q15042 981 aa30.06■■■□□ 2.4
CTSA-203ENST00000372459 NECTIN1Q15223 517 aa30.06■■■□□ 2.4
CTSA-203ENST00000372459 PRPF40BQ6NWY9 871 aaKnown RBP30.06■■■□□ 2.4
CTSA-203ENST00000372459 RBM8AQ9Y5S9 174 aaKnown RBP30.06■■■□□ 2.4
CTSA-203ENST00000372459 GOLIM4O00461 696 aa30.06■■■□□ 2.4
CTSA-203ENST00000372459 NTSR2O95665 410 aa30.06■■■□□ 2.4
CTSA-203ENST00000372459 KCNJ4P48050 445 aa30.06■■■□□ 2.4
CTSA-203ENST00000372459 KCNQ4P56696 695 aa30.06■■■□□ 2.4
CTSA-203ENST00000372459 FAM182BQ5T319 152 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms