RNA–Protein interactions for RNA: ENST00000372390.8

TSC22D3-205, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-205ENST00000372390 CENPQQ7L2Z9 268 aaPredicted RBP25.8■■□□□ 1.72
TSC22D3-205ENST00000372390 CCDC85AQ96PX6 553 aaPredicted RBP25.8■■□□□ 1.72
TSC22D3-205ENST00000372390 PTGER2P43116 358 aa25.79■■□□□ 1.72
TSC22D3-205ENST00000372390 CHMP3Q9Y3E7 222 aa25.79■■□□□ 1.72
TSC22D3-205ENST00000372390 RIC1Q4ADV7 1423 aa25.79■■□□□ 1.72
TSC22D3-205ENST00000372390 PDE8AO60658 829 aa25.78■■□□□ 1.72
TSC22D3-205ENST00000372390 HMMRO75330 724 aa25.78■■□□□ 1.72
TSC22D3-205ENST00000372390 C3orf67Q6ZVT6 689 aa25.78■■□□□ 1.72
TSC22D3-205ENST00000372390 CTSWP56202 376 aa25.77■■□□□ 1.72
TSC22D3-205ENST00000372390 PA2G4Q9UQ80 394 aaKnown RBP25.77■■□□□ 1.72
TSC22D3-205ENST00000372390 C10orf71Q711Q0 1435 aa25.77■■□□□ 1.72
TSC22D3-205ENST00000372390 TTLL11Q8NHH1 800 aa25.77■■□□□ 1.72
TSC22D3-205ENST00000372390 KLHDC4Q8TBB5 520 aa25.77■■□□□ 1.72
TSC22D3-205ENST00000372390 TNRC6CQ9HCJ0 1690 aaKnown RBP25.77■■□□□ 1.72
TSC22D3-205ENST00000372390 CSF1RP07333 972 aa25.76■■□□□ 1.71
TSC22D3-205ENST00000372390 SMC5Q8IY18 1101 aa25.76■■□□□ 1.71
TSC22D3-205ENST00000372390 DCTPP1Q9H773 170 aa25.76■■□□□ 1.71
TSC22D3-205ENST00000372390 RFX5P48382 616 aaPredicted RBP25.75■■□□□ 1.71
TSC22D3-205ENST00000372390 FAM161AQ3B820 660 aa25.75■■□□□ 1.71
TSC22D3-205ENST00000372390 SKAP1Q86WV1 359 aa25.75■■□□□ 1.71
TSC22D3-205ENST00000372390 EXOC6BQ9Y2D4 811 aa25.75■■□□□ 1.71
TSC22D3-205ENST00000372390 SLC10A5Q5PT55 438 aa25.74■■□□□ 1.71
TSC22D3-205ENST00000372390 BRIP1Q9BX63 1249 aa25.74■■□□□ 1.71
TSC22D3-205ENST00000372390 GREM2Q9H772 168 aa25.74■■□□□ 1.71
TSC22D3-205ENST00000372390 APBB1O00213 710 aa25.72■■□□□ 1.71
TSC22D3-205ENST00000372390 NLRP3Q96P20 1036 aa25.72■■□□□ 1.71
TSC22D3-205ENST00000372390 ZNF594Q96JF6 807 aaPredicted RBP25.72■■□□□ 1.71
TSC22D3-205ENST00000372390 TAF1P21675 1872 aa25.72■■□□□ 1.71
TSC22D3-205ENST00000372390 ANKRD31Q8N7Z5 1873 aa25.71■■□□□ 1.71
TSC22D3-205ENST00000372390 SURF6O75683 361 aaKnown RBP25.71■■□□□ 1.71
TSC22D3-205ENST00000372390 PDE6BP35913 854 aa25.71■■□□□ 1.71
TSC22D3-205ENST00000372390 PTPN12Q05209 780 aaKnown RBP25.71■■□□□ 1.71
TSC22D3-205ENST00000372390 COL4A1P02462 1669 aa25.71■■□□□ 1.71
TSC22D3-205ENST00000372390 GCC1Q96CN9 775 aa25.7■■□□□ 1.71
TSC22D3-205ENST00000372390 SIL1Q9H173 461 aa25.7■■□□□ 1.71
TSC22D3-205ENST00000372390 PPP1R1BQ9UD71 204 aaPredicted RBP25.7■■□□□ 1.71
TSC22D3-205ENST00000372390 KIF13BQ9NQT8 1826 aa25.7■■□□□ 1.71
TSC22D3-205ENST00000372390 LRP5O75197 1615 aa25.7■■□□□ 1.7
TSC22D3-205ENST00000372390 PDZRN3Q9UPQ7 1066 aa25.7■■□□□ 1.7
TSC22D3-205ENST00000372390 ITGA6P23229 1130 aa25.68■■□□□ 1.7
TSC22D3-205ENST00000372390 KLHL34Q8N239 644 aa25.68■■□□□ 1.7
TSC22D3-205ENST00000372390 SEC31BQ9NQW1 1179 aa25.68■■□□□ 1.7
TSC22D3-205ENST00000372390 CCDC57Q2TAC2 916 aa25.67■■□□□ 1.7
TSC22D3-205ENST00000372390 COPRSQ9NQ92 184 aa25.67■■□□□ 1.7
TSC22D3-205ENST00000372390 NOP58Q9Y2X3 529 aaKnown RBP25.67■■□□□ 1.7
TSC22D3-205ENST00000372390 CD2APQ9Y5K6 639 aa25.67■■□□□ 1.7
TSC22D3-205ENST00000372390 SPEF2Q9C093 1822 aa25.67■■□□□ 1.7
TSC22D3-205ENST00000372390 SMARCA5O60264 1052 aaPredicted RBP25.67■■□□□ 1.7
TSC22D3-205ENST00000372390 IFIT5Q13325 482 aaKnown RBP25.67■■□□□ 1.7
TSC22D3-205ENST00000372390 SF3B3Q15393 1217 aaKnown RBP25.67■■□□□ 1.7
TSC22D3-205ENST00000372390 CCDC152Q4G0S7 254 aa25.67■■□□□ 1.7
TSC22D3-205ENST00000372390 ANKRD45Q5TZF3 282 aa25.67■■□□□ 1.7
TSC22D3-205ENST00000372390 BCL11AQ9H165 835 aa25.66■■□□□ 1.7
TSC22D3-205ENST00000372390 KLRG2A4D1S0 409 aaPredicted RBP25.65■■□□□ 1.7
TSC22D3-205ENST00000372390 NUCB1Q02818 461 aa25.65■■□□□ 1.7
TSC22D3-205ENST00000372390 CRY2Q49AN0 593 aa25.65■■□□□ 1.7
TSC22D3-205ENST00000372390 RPGRQ92834 1020 aaKnown RBP25.65■■□□□ 1.7
TSC22D3-205ENST00000372390 PUS3Q9BZE2 481 aaKnown RBP25.65■■□□□ 1.7
TSC22D3-205ENST00000372390 ANKRD18BA2A2Z9 1011 aa25.64■■□□□ 1.7
TSC22D3-205ENST00000372390 LNPKQ9C0E8 428 aa25.64■■□□□ 1.7
TSC22D3-205ENST00000372390 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.64■■□□□ 1.7
TSC22D3-205ENST00000372390 COL11A2P13942 1736 aaPredicted RBP25.64■■□□□ 1.69
TSC22D3-205ENST00000372390 RTL9Q8NET4 1388 aa25.63■■□□□ 1.69
TSC22D3-205ENST00000372390 H0YIN7 160 aa25.63■■□□□ 1.69
TSC22D3-205ENST00000372390 OS9Q13438 667 aaPredicted RBP25.63■■□□□ 1.69
TSC22D3-205ENST00000372390 LRRC24Q50LG9 513 aa25.63■■□□□ 1.69
TSC22D3-205ENST00000372390 C2CD5Q86YS7 1000 aa25.63■■□□□ 1.69
TSC22D3-205ENST00000372390 TGFB2P61812 414 aa25.63■■□□□ 1.69
TSC22D3-205ENST00000372390 SASH1O94885 1247 aa25.62■■□□□ 1.69
TSC22D3-205ENST00000372390 G3BP1Q13283 466 aaKnown RBP eCLIP25.62■■□□□ 1.69
TSC22D3-205ENST00000372390 TAF7LQ5H9L4 462 aa25.62■■□□□ 1.69
TSC22D3-205ENST00000372390 ATG9AQ7Z3C6 839 aa25.62■■□□□ 1.69
TSC22D3-205ENST00000372390 CHD1LQ86WJ1 897 aa25.62■■□□□ 1.69
TSC22D3-205ENST00000372390 SRGNP10124 158 aa25.61■■□□□ 1.69
TSC22D3-205ENST00000372390 NPR1P16066 1061 aa25.61■■□□□ 1.69
TSC22D3-205ENST00000372390 SRCAPQ6ZRS2 3230 aa25.61■■□□□ 1.69
TSC22D3-205ENST00000372390 PDE4AP27815 886 aa25.6■■□□□ 1.69
TSC22D3-205ENST00000372390 DDX46Q7L014 1031 aaKnown RBP25.6■■□□□ 1.69
TSC22D3-205ENST00000372390 RHPN1Q8TCX5 695 aa25.6■■□□□ 1.69
TSC22D3-205ENST00000372390 MASTLQ96GX5 879 aa25.6■■□□□ 1.69
TSC22D3-205ENST00000372390 RBM17Q96I25 401 aaKnown RBP25.6■■□□□ 1.69
TSC22D3-205ENST00000372390 IL1RAPL2Q9NP60 686 aa25.6■■□□□ 1.69
TSC22D3-205ENST00000372390 DLEC1Q9Y238 1755 aa25.6■■□□□ 1.69
TSC22D3-205ENST00000372390 EYA2O00167 538 aa25.6■■□□□ 1.69
TSC22D3-205ENST00000372390 RAB11FIP3O75154 756 aa25.6■■□□□ 1.69
TSC22D3-205ENST00000372390 LRRCC1Q9C099 1032 aa25.6■■□□□ 1.69
TSC22D3-205ENST00000372390 FHDC1Q9C0D6 1143 aaPredicted RBP25.6■■□□□ 1.69
TSC22D3-205ENST00000372390 CHRNA5P30532 468 aa25.59■■□□□ 1.69
TSC22D3-205ENST00000372390 C16orf71Q8IYS4 520 aaPredicted RBP25.59■■□□□ 1.69
TSC22D3-205ENST00000372390 HOXA10P31260 410 aaPredicted RBP25.58■■□□□ 1.69
TSC22D3-205ENST00000372390 HSP90AB4PQ58FF6 505 aa25.58■■□□□ 1.69
TSC22D3-205ENST00000372390 CELF1Q92879 486 aaKnown RBP25.58■■□□□ 1.69
TSC22D3-205ENST00000372390 KIAA1551Q9HCM1 1747 aa25.58■■□□□ 1.69
TSC22D3-205ENST00000372390 STYK1Q6J9G0 422 aa25.58■■□□□ 1.68
TSC22D3-205ENST00000372390 KIF1BPQ96EK5 621 aa25.58■■□□□ 1.68
TSC22D3-205ENST00000372390 CDC5LQ99459 802 aaKnown RBP25.58■■□□□ 1.68
TSC22D3-205ENST00000372390 DPEP1P16444 411 aa25.57■■□□□ 1.68
TSC22D3-205ENST00000372390 RGS3P49796 1198 aa25.57■■□□□ 1.68
TSC22D3-205ENST00000372390 LDHAL6AQ6ZMR3 332 aa25.57■■□□□ 1.68
TSC22D3-205ENST00000372390 OTUD7AQ8TE49 926 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms