RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 DDX60Q8IY21 1712 aaKnown RBP25.54■■□□□ 1.68
TMEM53-205ENST00000372244 LAMB2P55268 1798 aa25.53■■□□□ 1.68
TMEM53-205ENST00000372244 CCDC88AQ3V6T2 1871 aa25.53■■□□□ 1.68
TMEM53-205ENST00000372244 KDM2BQ8NHM5 1336 aa25.53■■□□□ 1.68
TMEM53-205ENST00000372244 F6X3S4 739 aa25.53■■□□□ 1.68
TMEM53-205ENST00000372244 C1QTNF8P60827 252 aa25.53■■□□□ 1.68
TMEM53-205ENST00000372244 TMC4Q7Z404 712 aa25.53■■□□□ 1.68
TMEM53-205ENST00000372244 MRPL50Q8N5N7 158 aaKnown RBP25.53■■□□□ 1.68
TMEM53-205ENST00000372244 NMRK2Q9NPI5 230 aa25.53■■□□□ 1.68
TMEM53-205ENST00000372244 BEND3Q5T5X7 828 aa25.52■■□□□ 1.68
TMEM53-205ENST00000372244 CELF1Q92879 486 aaKnown RBP25.52■■□□□ 1.68
TMEM53-205ENST00000372244 SSH1Q8WYL5 1049 aa25.51■■□□□ 1.67
TMEM53-205ENST00000372244 TMX4Q9H1E5 349 aaPredicted RBP25.51■■□□□ 1.67
TMEM53-205ENST00000372244 IARSP41252 1262 aaKnown RBP25.5■■□□□ 1.67
TMEM53-205ENST00000372244 CASP7P55210 303 aa25.5■■□□□ 1.67
TMEM53-205ENST00000372244 RPS8P62241 208 aaKnown RBP25.5■■□□□ 1.67
TMEM53-205ENST00000372244 DPY19L2Q6NUT2 758 aa25.5■■□□□ 1.67
TMEM53-205ENST00000372244 RTFDC1Q9BY42 306 aaPredicted RBP25.5■■□□□ 1.67
TMEM53-205ENST00000372244 CT47B1P0C2W7 299 aaPredicted RBP25.49■■□□□ 1.67
TMEM53-205ENST00000372244 CCDC152Q4G0S7 254 aa25.49■■□□□ 1.67
TMEM53-205ENST00000372244 DICER1Q9UPY3 1922 aaKnown RBP25.48■■□□□ 1.67
TMEM53-205ENST00000372244 ALDH1L2Q3SY69 923 aa25.48■■□□□ 1.67
TMEM53-205ENST00000372244 UBE3BQ7Z3V4 1068 aa25.48■■□□□ 1.67
TMEM53-205ENST00000372244 TTLL11Q8NHH1 800 aa25.48■■□□□ 1.67
TMEM53-205ENST00000372244 SEC31BQ9NQW1 1179 aa25.48■■□□□ 1.67
TMEM53-205ENST00000372244 PLA2G12BQ9BX93 195 aa25.47■■□□□ 1.67
TMEM53-205ENST00000372244 VPS33BQ9H267 617 aa25.47■■□□□ 1.67
TMEM53-205ENST00000372244 RRAGCQ9HB90 399 aa25.47■■□□□ 1.67
TMEM53-205ENST00000372244 FZD9O00144 591 aa25.47■■□□□ 1.67
TMEM53-205ENST00000372244 CTSWP56202 376 aa25.47■■□□□ 1.67
TMEM53-205ENST00000372244 MPNDQ8N594 471 aa25.47■■□□□ 1.67
TMEM53-205ENST00000372244 TAF1P21675 1872 aa25.45■■□□□ 1.66
TMEM53-205ENST00000372244 POTECB2RU33 542 aa25.45■■□□□ 1.66
TMEM53-205ENST00000372244 DPP8Q6V1X1 898 aaPredicted RBP25.45■■□□□ 1.66
TMEM53-205ENST00000372244 SUPT20HQ8NEM7 779 aa25.44■■□□□ 1.66
TMEM53-205ENST00000372244 PTPRCP08575 1304 aa25.44■■□□□ 1.66
TMEM53-205ENST00000372244 ALDH1L1O75891 902 aa25.43■■□□□ 1.66
TMEM53-205ENST00000372244 TOMM70O94826 608 aa25.43■■□□□ 1.66
TMEM53-205ENST00000372244 CSF1RP07333 972 aa25.43■■□□□ 1.66
TMEM53-205ENST00000372244 VEGFAP15692 232 aaPredicted RBP25.43■■□□□ 1.66
TMEM53-205ENST00000372244 HNRNPUQ00839 825 aaKnown RBP eCLIP25.43■■□□□ 1.66
TMEM53-205ENST00000372244 JDP2Q8WYK2 163 aa25.43■■□□□ 1.66
TMEM53-205ENST00000372244 CCDC85AQ96PX6 553 aaPredicted RBP25.43■■□□□ 1.66
TMEM53-205ENST00000372244 COL4A1P02462 1669 aa25.42■■□□□ 1.66
TMEM53-205ENST00000372244 DDNO94850 711 aaPredicted RBP25.42■■□□□ 1.66
TMEM53-205ENST00000372244 BRPF1P55201 1214 aaPredicted RBP25.42■■□□□ 1.66
TMEM53-205ENST00000372244 RTL9Q8NET4 1388 aa25.42■■□□□ 1.66
TMEM53-205ENST00000372244 SLC4A10Q6U841 1118 aa25.41■■□□□ 1.66
TMEM53-205ENST00000372244 LARGE2Q8N3Y3 721 aa25.41■■□□□ 1.66
TMEM53-205ENST00000372244 BCL2L13Q9BXK5 485 aa25.41■■□□□ 1.66
TMEM53-205ENST00000372244 SRCIN1Q9C0H9 1055 aa25.41■■□□□ 1.66
TMEM53-205ENST00000372244 GREM2Q9H772 168 aa25.41■■□□□ 1.66
TMEM53-205ENST00000372244 TIAM2Q8IVF5 1701 aa25.41■■□□□ 1.66
TMEM53-205ENST00000372244 GPSM2P81274 684 aa25.4■■□□□ 1.66
TMEM53-205ENST00000372244 AOC3Q16853 763 aa25.4■■□□□ 1.66
TMEM53-205ENST00000372244 NSFL1CQ9UNZ2 370 aaKnown RBP25.4■■□□□ 1.66
TMEM53-205ENST00000372244 COL4A5P29400 1685 aa25.39■■□□□ 1.66
TMEM53-205ENST00000372244 GRM8O00222 908 aa25.39■■□□□ 1.65
TMEM53-205ENST00000372244 PPIP5K2O43314 1243 aa25.39■■□□□ 1.65
TMEM53-205ENST00000372244 KIAA2012Q0VF49 1180 aa25.39■■□□□ 1.65
TMEM53-205ENST00000372244 ANKRD18AQ8IVF6 992 aa25.39■■□□□ 1.65
TMEM53-205ENST00000372244 L3MBTL3Q96JM7 780 aaPredicted RBP25.39■■□□□ 1.65
TMEM53-205ENST00000372244 CDC5LQ99459 802 aaKnown RBP25.39■■□□□ 1.65
TMEM53-205ENST00000372244 SMC4Q9NTJ3 1288 aa25.39■■□□□ 1.65
TMEM53-205ENST00000372244 PODXL2Q9NZ53 605 aa25.39■■□□□ 1.65
TMEM53-205ENST00000372244 ZNF541Q9H0D2 1346 aa25.39■■□□□ 1.65
TMEM53-205ENST00000372244 RARSP54136 660 aaKnown RBP25.38■■□□□ 1.65
TMEM53-205ENST00000372244 FOXO4P98177 505 aa25.38■■□□□ 1.65
TMEM53-205ENST00000372244 POLLQ9UGP5 575 aa25.38■■□□□ 1.65
TMEM53-205ENST00000372244 RBM46Q8TBY0 533 aaKnown RBP25.37■■□□□ 1.65
TMEM53-205ENST00000372244 BSDC1Q9NW68 430 aaPredicted RBP25.37■■□□□ 1.65
TMEM53-205ENST00000372244 GPC2Q8N158 579 aa25.36■■□□□ 1.65
TMEM53-205ENST00000372244 C9orf78Q9NZ63 289 aaPredicted RBP25.36■■□□□ 1.65
TMEM53-205ENST00000372244 LRRC37AA6NMS7 1700 aa25.36■■□□□ 1.65
TMEM53-205ENST00000372244 WDR90Q96KV7 1748 aa25.36■■□□□ 1.65
TMEM53-205ENST00000372244 NIM1KQ8IY84 436 aa25.35■■□□□ 1.65
TMEM53-205ENST00000372244 C16orf71Q8IYS4 520 aaPredicted RBP25.35■■□□□ 1.65
TMEM53-205ENST00000372244 ZNRF3Q9ULT6 936 aa25.35■■□□□ 1.65
TMEM53-205ENST00000372244 UTYO14607 1347 aa25.35■■□□□ 1.65
TMEM53-205ENST00000372244 ITGA6P23229 1130 aa25.34■■□□□ 1.65
TMEM53-205ENST00000372244 EIF6P56537 245 aaKnown RBP25.34■■□□□ 1.65
TMEM53-205ENST00000372244 TBC1D16Q8TBP0 767 aa25.34■■□□□ 1.65
TMEM53-205ENST00000372244 NOB1Q9ULX3 412 aaKnown RBP25.34■■□□□ 1.65
TMEM53-205ENST00000372244 DUOX1Q9NRD9 1551 aa25.34■■□□□ 1.65
TMEM53-205ENST00000372244 WASHC4Q2M389 1173 aa25.34■■□□□ 1.65
TMEM53-205ENST00000372244 EPHA10Q5JZY3 1008 aa25.34■■□□□ 1.65
TMEM53-205ENST00000372244 NBPF7P0C2Y1 421 aaPredicted RBP25.33■■□□□ 1.65
TMEM53-205ENST00000372244 FAM161AQ3B820 660 aa25.33■■□□□ 1.65
TMEM53-205ENST00000372244 ANKIB1Q9P2G1 1089 aa25.33■■□□□ 1.65
TMEM53-205ENST00000372244 MINPP1Q9UNW1 487 aa25.33■■□□□ 1.65
TMEM53-205ENST00000372244 C6orf229H3BNL8 230 aa25.32■■□□□ 1.64
TMEM53-205ENST00000372244 KAZALD1Q96I82 304 aa25.32■■□□□ 1.64
TMEM53-205ENST00000372244 MYH3P11055 1940 aa25.31■■□□□ 1.64
TMEM53-205ENST00000372244 ZBED9Q6R2W3 1325 aa25.31■■□□□ 1.64
TMEM53-205ENST00000372244 IQCA1LA6NCM1 817 aa25.31■■□□□ 1.64
TMEM53-205ENST00000372244 CXCL9Q07325 125 aa25.3■■□□□ 1.64
TMEM53-205ENST00000372244 FSTL1Q12841 308 aa25.3■■□□□ 1.64
TMEM53-205ENST00000372244 LMBR1LQ6UX01 489 aa25.3■■□□□ 1.64
TMEM53-205ENST00000372244 ARHGAP45Q92619 1136 aa25.3■■□□□ 1.64
TMEM53-205ENST00000372244 EYA3Q99504 573 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms