RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 CRAMP1Q96RY5 1269 aa20.07■□□□□ 0.8
PFDN4-201ENST00000371419 USP44Q9H0E7 712 aa20.07■□□□□ 0.8
PFDN4-201ENST00000371419 NBPF7P0C2Y1 421 aaPredicted RBP20.06■□□□□ 0.8
PFDN4-201ENST00000371419 CTSWP56202 376 aa20.06■□□□□ 0.8
PFDN4-201ENST00000371419 CCDC152Q4G0S7 254 aa20.06■□□□□ 0.8
PFDN4-201ENST00000371419 PRPF40BQ6NWY9 871 aaKnown RBP20.06■□□□□ 0.8
PFDN4-201ENST00000371419 MS4A1P11836 297 aa20.05■□□□□ 0.8
PFDN4-201ENST00000371419 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.05■□□□□ 0.8
PFDN4-201ENST00000371419 GRIN3BO60391 1043 aa20.05■□□□□ 0.8
PFDN4-201ENST00000371419 TMEM57Q8N5G2 664 aa20.05■□□□□ 0.8
PFDN4-201ENST00000371419 TTLL11Q8NHH1 800 aa20.05■□□□□ 0.8
PFDN4-201ENST00000371419 UTRNP46939 3433 aa20.03■□□□□ 0.8
PFDN4-201ENST00000371419 PLIN1O60240 522 aa20.03■□□□□ 0.8
PFDN4-201ENST00000371419 RLBP1P12271 317 aa20.03■□□□□ 0.8
PFDN4-201ENST00000371419 FOXO4P98177 505 aa20.03■□□□□ 0.8
PFDN4-201ENST00000371419 SUCLG2Q96I99 432 aa20.03■□□□□ 0.8
PFDN4-201ENST00000371419 CCDC85AQ96PX6 553 aaPredicted RBP20.03■□□□□ 0.8
PFDN4-201ENST00000371419 MYH3P11055 1940 aa20.03■□□□□ 0.8
PFDN4-201ENST00000371419 SLX4Q8IY92 1834 aa20.03■□□□□ 0.8
PFDN4-201ENST00000371419 ARFGEF1Q9Y6D6 1849 aa20.03■□□□□ 0.8
PFDN4-201ENST00000371419 CSF1RP07333 972 aa20.02■□□□□ 0.8
PFDN4-201ENST00000371419 GRAPQ13588 217 aa20.02■□□□□ 0.8
PFDN4-201ENST00000371419 GRAPLQ8TC17 118 aaPredicted RBP20.02■□□□□ 0.8
PFDN4-201ENST00000371419 CACNA1SQ13698 1873 aa20.01■□□□□ 0.79
PFDN4-201ENST00000371419 C21orf2O43822 256 aa20.01■□□□□ 0.79
PFDN4-201ENST00000371419 BBOX1O75936 387 aa20.01■□□□□ 0.79
PFDN4-201ENST00000371419 UBTFL1P0CB47 393 aaPredicted RBP20.01■□□□□ 0.79
PFDN4-201ENST00000371419 EPHA10Q5JZY3 1008 aa20.01■□□□□ 0.79
PFDN4-201ENST00000371419 ERICH6BQ5W0A0 696 aa20.01■□□□□ 0.79
PFDN4-201ENST00000371419 POTEDQ86YR6 584 aa20.01■□□□□ 0.79
PFDN4-201ENST00000371419 PANK1Q8TE04 598 aa20.01■□□□□ 0.79
PFDN4-201ENST00000371419 GREM2Q9H772 168 aa20.01■□□□□ 0.79
PFDN4-201ENST00000371419 ZNF219Q9P2Y4 722 aaPredicted RBP20.01■□□□□ 0.79
PFDN4-201ENST00000371419 HDAC5Q9UQL6 1122 aa20.01■□□□□ 0.79
PFDN4-201ENST00000371419 RTL9Q8NET4 1388 aa20.01■□□□□ 0.79
PFDN4-201ENST00000371419 PPEF1O14829 653 aaPredicted RBP20■□□□□ 0.79
PFDN4-201ENST00000371419 GNAI3P08754 354 aa20■□□□□ 0.79
PFDN4-201ENST00000371419 SOGA3Q5TF21 947 aa20■□□□□ 0.79
PFDN4-201ENST00000371419 ITPRIPQ8IWB1 547 aa20■□□□□ 0.79
PFDN4-201ENST00000371419 C7orf43Q8WVR3 580 aa20■□□□□ 0.79
PFDN4-201ENST00000371419 KAZALD1Q96I82 304 aa20■□□□□ 0.79
PFDN4-201ENST00000371419 MEIS3Q99687 375 aa20■□□□□ 0.79
PFDN4-201ENST00000371419 SEC31BQ9NQW1 1179 aa20■□□□□ 0.79
PFDN4-201ENST00000371419 LMBR1LQ6UX01 489 aa19.99■□□□□ 0.79
PFDN4-201ENST00000371419 CELF1Q92879 486 aaKnown RBP19.99■□□□□ 0.79
PFDN4-201ENST00000371419 RPS8P62241 208 aaKnown RBP19.99■□□□□ 0.79
PFDN4-201ENST00000371419 PDE3AQ14432 1141 aa19.99■□□□□ 0.79
PFDN4-201ENST00000371419 FAM161AQ3B820 660 aa19.99■□□□□ 0.79
PFDN4-201ENST00000371419 ARHGAP27Q6ZUM4 889 aa19.99■□□□□ 0.79
PFDN4-201ENST00000371419 TMC4Q7Z404 712 aa19.99■□□□□ 0.79
PFDN4-201ENST00000371419 CDC5LQ99459 802 aaKnown RBP19.99■□□□□ 0.79
PFDN4-201ENST00000371419 BICC1Q9H694 974 aaKnown RBP19.99■□□□□ 0.79
PFDN4-201ENST00000371419 CHMP3Q9Y3E7 222 aa19.99■□□□□ 0.79
PFDN4-201ENST00000371419 CC2D2BQ6DHV5 1058 aa19.98■□□□□ 0.79
PFDN4-201ENST00000371419 TMX4Q9H1E5 349 aaPredicted RBP19.98■□□□□ 0.79
PFDN4-201ENST00000371419 ATP6V0A2Q9Y487 856 aa19.98■□□□□ 0.79
PFDN4-201ENST00000371419 ITGA6P23229 1130 aa19.97■□□□□ 0.79
PFDN4-201ENST00000371419 RRP1P56182 461 aaKnown RBP19.97■□□□□ 0.79
PFDN4-201ENST00000371419 RABL6Q3YEC7 729 aaPredicted RBP19.97■□□□□ 0.79
PFDN4-201ENST00000371419 CCDC93Q567U6 631 aa19.97■□□□□ 0.79
PFDN4-201ENST00000371419 TAF1P21675 1872 aa19.97■□□□□ 0.79
PFDN4-201ENST00000371419 IFIT5Q13325 482 aaKnown RBP19.96■□□□□ 0.79
PFDN4-201ENST00000371419 OLFM4Q6UX06 510 aa19.96■□□□□ 0.79
PFDN4-201ENST00000371419 ANKRD18AQ8IVF6 992 aa19.96■□□□□ 0.79
PFDN4-201ENST00000371419 SP8Q8IXZ3 490 aa19.96■□□□□ 0.79
PFDN4-201ENST00000371419 ANKRD44Q8N8A2 993 aa19.96■□□□□ 0.79
PFDN4-201ENST00000371419 LRRFIP2Q9Y608 721 aaKnown RBP19.96■□□□□ 0.79
PFDN4-201ENST00000371419 ANKRD18BA2A2Z9 1011 aa19.95■□□□□ 0.78
PFDN4-201ENST00000371419 MVPQ14764 893 aaKnown RBP19.95■□□□□ 0.78
PFDN4-201ENST00000371419 CCDC57Q2TAC2 916 aa19.95■□□□□ 0.78
PFDN4-201ENST00000371419 COL4A1P02462 1669 aa19.94■□□□□ 0.78
PFDN4-201ENST00000371419 ZBTB7BO15156 539 aaPredicted RBP19.94■□□□□ 0.78
PFDN4-201ENST00000371419 GNAI2P04899 355 aa19.94■□□□□ 0.78
PFDN4-201ENST00000371419 GRIPAP1Q4V328 841 aa19.94■□□□□ 0.78
PFDN4-201ENST00000371419 C20orf194Q5TEA3 1177 aa19.94■□□□□ 0.78
PFDN4-201ENST00000371419 RTKN2Q8IZC4 609 aa19.94■□□□□ 0.78
PFDN4-201ENST00000371419 COG6Q9Y2V7 657 aa19.94■□□□□ 0.78
PFDN4-201ENST00000371419 IGHMBP2P38935 993 aaKnown RBP19.93■□□□□ 0.78
PFDN4-201ENST00000371419 DDX19BQ9UMR2 479 aa19.93■□□□□ 0.78
PFDN4-201ENST00000371419 SLC51AQ86UW1 340 aa19.92■□□□□ 0.78
PFDN4-201ENST00000371419 NFKBIEO00221 500 aa19.92■□□□□ 0.78
PFDN4-201ENST00000371419 TAF7LQ5H9L4 462 aa19.92■□□□□ 0.78
PFDN4-201ENST00000371419 MPHOSPH8Q99549 860 aa19.92■□□□□ 0.78
PFDN4-201ENST00000371419 TAOK3Q9H2K8 898 aa19.92■□□□□ 0.78
PFDN4-201ENST00000371419 BSDC1Q9NW68 430 aaPredicted RBP19.92■□□□□ 0.78
PFDN4-201ENST00000371419 FER1L6Q2WGJ9 1857 aa19.91■□□□□ 0.78
PFDN4-201ENST00000371419 SNED1Q8TER0 1413 aa19.91■□□□□ 0.78
PFDN4-201ENST00000371419 RASSF7Q02833 373 aa19.91■□□□□ 0.78
PFDN4-201ENST00000371419 CHMP4BQ9H444 224 aaKnown RBP19.91■□□□□ 0.78
PFDN4-201ENST00000371419 LTBP3Q9NS15 1303 aa19.9■□□□□ 0.78
PFDN4-201ENST00000371419 FKBP4Q02790 459 aaKnown RBP eCLIP19.9■□□□□ 0.78
PFDN4-201ENST00000371419 MPNDQ8N594 471 aa19.9■□□□□ 0.78
PFDN4-201ENST00000371419 LRRC37AA6NMS7 1700 aa19.9■□□□□ 0.78
PFDN4-201ENST00000371419 DPP8Q6V1X1 898 aaPredicted RBP19.89■□□□□ 0.77
PFDN4-201ENST00000371419 PIAS4Q8N2W9 510 aaPredicted RBP19.89■□□□□ 0.77
PFDN4-201ENST00000371419 ZNF594Q96JF6 807 aaPredicted RBP19.89■□□□□ 0.77
PFDN4-201ENST00000371419 PSMD1Q99460 953 aa19.89■□□□□ 0.77
PFDN4-201ENST00000371419 MINPP1Q9UNW1 487 aa19.88■□□□□ 0.77
PFDN4-201ENST00000371419 NSFL1CQ9UNZ2 370 aaKnown RBP19.88■□□□□ 0.77
PFDN4-201ENST00000371419 LMNB1P20700 586 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms