RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 CSF1RP07333 972 aa22■■□□□ 1.11
VPS37B-202ENST00000371248 ATP8B2P98198 1209 aa22■■□□□ 1.11
VPS37B-202ENST00000371248 PTGER2P43116 358 aa22■■□□□ 1.11
VPS37B-202ENST00000371248 BRIP1Q9BX63 1249 aa22■■□□□ 1.11
VPS37B-202ENST00000371248 SPON1Q9HCB6 807 aa22■■□□□ 1.11
VPS37B-202ENST00000371248 SIRT2Q8IXJ6 389 aa21.99■■□□□ 1.11
VPS37B-202ENST00000371248 RIC1Q4ADV7 1423 aa21.99■■□□□ 1.11
VPS37B-202ENST00000371248 PNMA6EA0A0J9YXQ4 647 aa21.99■■□□□ 1.11
VPS37B-202ENST00000371248 SRGAP3O43295 1099 aa21.99■■□□□ 1.11
VPS37B-202ENST00000371248 MTX1Q13505 466 aa21.99■■□□□ 1.11
VPS37B-202ENST00000371248 SF3B3Q15393 1217 aaKnown RBP21.98■■□□□ 1.11
VPS37B-202ENST00000371248 CCDC152Q4G0S7 254 aa21.97■■□□□ 1.11
VPS37B-202ENST00000371248 GREM2Q9H772 168 aa21.97■■□□□ 1.11
VPS37B-202ENST00000371248 FAM161AQ3B820 660 aa21.97■■□□□ 1.11
VPS37B-202ENST00000371248 TAF1P21675 1872 aa21.96■■□□□ 1.11
VPS37B-202ENST00000371248 PDE6BP35913 854 aa21.96■■□□□ 1.11
VPS37B-202ENST00000371248 KLRG2A4D1S0 409 aaPredicted RBP21.95■■□□□ 1.1
VPS37B-202ENST00000371248 CCDC57Q2TAC2 916 aa21.95■■□□□ 1.1
VPS37B-202ENST00000371248 SSH3Q8TE77 659 aa21.95■■□□□ 1.1
VPS37B-202ENST00000371248 C10orf71Q711Q0 1435 aa21.95■■□□□ 1.1
VPS37B-202ENST00000371248 HMMRO75330 724 aa21.94■■□□□ 1.1
VPS37B-202ENST00000371248 ITGA6P23229 1130 aa21.94■■□□□ 1.1
VPS37B-202ENST00000371248 IFIT5Q13325 482 aaKnown RBP21.94■■□□□ 1.1
VPS37B-202ENST00000371248 PPP4R2Q9NY27 417 aa21.94■■□□□ 1.1
VPS37B-202ENST00000371248 KIF13BQ9NQT8 1826 aa21.94■■□□□ 1.1
VPS37B-202ENST00000371248 POLA2Q14181 598 aa21.94■■□□□ 1.1
VPS37B-202ENST00000371248 CRY2Q49AN0 593 aa21.94■■□□□ 1.1
VPS37B-202ENST00000371248 SEC31BQ9NQW1 1179 aa21.94■■□□□ 1.1
VPS37B-202ENST00000371248 RPGRQ92834 1020 aaKnown RBP21.93■■□□□ 1.1
VPS37B-202ENST00000371248 ANKRD18BA2A2Z9 1011 aa21.92■■□□□ 1.1
VPS37B-202ENST00000371248 RFX5P48382 616 aaPredicted RBP21.92■■□□□ 1.1
VPS37B-202ENST00000371248 KLHDC4Q8TBB5 520 aa21.92■■□□□ 1.1
VPS37B-202ENST00000371248 RWDD1Q9H446 243 aaPredicted RBP21.92■■□□□ 1.1
VPS37B-202ENST00000371248 PPP1R1BQ9UD71 204 aaPredicted RBP21.92■■□□□ 1.1
VPS37B-202ENST00000371248 IGHDP01880 384 aa21.92■■□□□ 1.1
VPS37B-202ENST00000371248 HDAC1Q13547 482 aaPredicted RBP21.92■■□□□ 1.1
VPS37B-202ENST00000371248 DDX46Q7L014 1031 aaKnown RBP21.92■■□□□ 1.1
VPS37B-202ENST00000371248 ZNF594Q96JF6 807 aaPredicted RBP21.92■■□□□ 1.1
VPS37B-202ENST00000371248 CCDC136Q96JN2 1154 aa21.92■■□□□ 1.1
VPS37B-202ENST00000371248 COL11A2P13942 1736 aaPredicted RBP21.91■■□□□ 1.1
VPS37B-202ENST00000371248 RTL9Q8NET4 1388 aa21.91■■□□□ 1.1
VPS37B-202ENST00000371248 C2CD5Q86YS7 1000 aa21.91■■□□□ 1.1
VPS37B-202ENST00000371248 KLHL34Q8N239 644 aa21.91■■□□□ 1.1
VPS37B-202ENST00000371248 PA2G4Q9UQ80 394 aaKnown RBP21.91■■□□□ 1.1
VPS37B-202ENST00000371248 H0YIN7 160 aa21.91■■□□□ 1.1
VPS37B-202ENST00000371248 SRGNP10124 158 aa21.91■■□□□ 1.1
VPS37B-202ENST00000371248 TAF7LQ5H9L4 462 aa21.91■■□□□ 1.1
VPS37B-202ENST00000371248 SPEF2Q9C093 1822 aa21.9■■□□□ 1.1
VPS37B-202ENST00000371248 CHRNA5P30532 468 aa21.9■■□□□ 1.1
VPS37B-202ENST00000371248 PTPN12Q05209 780 aaKnown RBP21.9■■□□□ 1.1
VPS37B-202ENST00000371248 B4GALNT3Q6L9W6 998 aa21.9■■□□□ 1.1
VPS37B-202ENST00000371248 RBM17Q96I25 401 aaKnown RBP21.9■■□□□ 1.1
VPS37B-202ENST00000371248 TSHZ2Q9NRE2 1034 aa21.89■■□□□ 1.1
VPS37B-202ENST00000371248 SIL1Q9H173 461 aa21.89■■□□□ 1.09
VPS37B-202ENST00000371248 PDZRN3Q9UPQ7 1066 aa21.89■■□□□ 1.09
VPS37B-202ENST00000371248 COL4A1P02462 1669 aa21.88■■□□□ 1.09
VPS37B-202ENST00000371248 SURF6O75683 361 aaKnown RBP21.88■■□□□ 1.09
VPS37B-202ENST00000371248 NPR1P16066 1061 aa21.88■■□□□ 1.09
VPS37B-202ENST00000371248 HOXA10P31260 410 aaPredicted RBP21.88■■□□□ 1.09
VPS37B-202ENST00000371248 CELF1Q92879 486 aaKnown RBP21.88■■□□□ 1.09
VPS37B-202ENST00000371248 MASTLQ96GX5 879 aa21.88■■□□□ 1.09
VPS37B-202ENST00000371248 CDC5LQ99459 802 aaKnown RBP21.88■■□□□ 1.09
VPS37B-202ENST00000371248 COPRSQ9NQ92 184 aa21.88■■□□□ 1.09
VPS37B-202ENST00000371248 ZNF622Q969S3 477 aaKnown RBP eCLIP21.87■■□□□ 1.09
VPS37B-202ENST00000371248 CD2APQ9Y5K6 639 aa21.87■■□□□ 1.09
VPS37B-202ENST00000371248 CACNA1SQ13698 1873 aa21.87■■□□□ 1.09
VPS37B-202ENST00000371248 ANKRD18AQ8IVF6 992 aa21.87■■□□□ 1.09
VPS37B-202ENST00000371248 EXOC6BQ9Y2D4 811 aa21.87■■□□□ 1.09
VPS37B-202ENST00000371248 A0A0G2JLW4 131 aa21.86■■□□□ 1.09
VPS37B-202ENST00000371248 IGHMBP2P38935 993 aaKnown RBP21.86■■□□□ 1.09
VPS37B-202ENST00000371248 TGFB2P61812 414 aa21.86■■□□□ 1.09
VPS37B-202ENST00000371248 CRAMP1Q96RY5 1269 aa21.86■■□□□ 1.09
VPS37B-202ENST00000371248 DCTPP1Q9H773 170 aa21.86■■□□□ 1.09
VPS37B-202ENST00000371248 DPEP1P16444 411 aa21.86■■□□□ 1.09
VPS37B-202ENST00000371248 RPS8P62241 208 aaKnown RBP21.86■■□□□ 1.09
VPS37B-202ENST00000371248 GRAPQ13588 217 aa21.86■■□□□ 1.09
VPS37B-202ENST00000371248 LDHAL6AQ6ZMR3 332 aa21.86■■□□□ 1.09
VPS37B-202ENST00000371248 GRAPLQ8TC17 118 aaPredicted RBP21.86■■□□□ 1.09
VPS37B-202ENST00000371248 MPHOSPH8Q99549 860 aa21.86■■□□□ 1.09
VPS37B-202ENST00000371248 PUS3Q9BZE2 481 aaKnown RBP21.86■■□□□ 1.09
VPS37B-202ENST00000371248 DLEC1Q9Y238 1755 aa21.85■■□□□ 1.09
VPS37B-202ENST00000371248 ALDH1B1P30837 517 aa21.85■■□□□ 1.09
VPS37B-202ENST00000371248 NOP58Q9Y2X3 529 aaKnown RBP21.85■■□□□ 1.09
VPS37B-202ENST00000371248 KIAA1551Q9HCM1 1747 aa21.85■■□□□ 1.09
VPS37B-202ENST00000371248 G3BP1Q13283 466 aaKnown RBP eCLIP21.84■■□□□ 1.09
VPS37B-202ENST00000371248 STYK1Q6J9G0 422 aa21.84■■□□□ 1.09
VPS37B-202ENST00000371248 LRRC24Q50LG9 513 aa21.84■■□□□ 1.09
VPS37B-202ENST00000371248 CNNM1Q9NRU3 951 aa21.84■■□□□ 1.09
VPS37B-202ENST00000371248 EYA2O00167 538 aa21.83■■□□□ 1.09
VPS37B-202ENST00000371248 APBB1O00213 710 aa21.83■■□□□ 1.09
VPS37B-202ENST00000371248 OS9Q13438 667 aaPredicted RBP21.83■■□□□ 1.09
VPS37B-202ENST00000371248 KCNA3P22001 575 aa21.83■■□□□ 1.08
VPS37B-202ENST00000371248 GCC1Q96CN9 775 aa21.83■■□□□ 1.08
VPS37B-202ENST00000371248 HSP90AB4PQ58FF6 505 aa21.82■■□□□ 1.08
VPS37B-202ENST00000371248 FHDC1Q9C0D6 1143 aaPredicted RBP21.82■■□□□ 1.08
VPS37B-202ENST00000371248 BSDC1Q9NW68 430 aaPredicted RBP21.82■■□□□ 1.08
VPS37B-202ENST00000371248 FBXO3Q9UK99 471 aa21.82■■□□□ 1.08
VPS37B-202ENST00000371248 BBOX1O75936 387 aa21.81■■□□□ 1.08
VPS37B-202ENST00000371248 ATG9AQ7Z3C6 839 aa21.81■■□□□ 1.08
VPS37B-202ENST00000371248 CNKSR1Q969H4 720 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms