RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 ARHGEF12Q9NZN5 1544 aa22.66■■□□□ 1.22
LMO4-202ENST00000370544 KIAA0754O94854 1291 aa22.66■■□□□ 1.22
LMO4-202ENST00000370544 CETN2P41208 172 aa22.66■■□□□ 1.22
LMO4-202ENST00000370544 KANK3Q6NY19 840 aa22.66■■□□□ 1.22
LMO4-202ENST00000370544 LINS1Q8NG48 757 aa22.66■■□□□ 1.22
LMO4-202ENST00000370544 CABLES1Q8TDN4 633 aa22.66■■□□□ 1.22
LMO4-202ENST00000370544 TRPM2O94759 1503 aa22.66■■□□□ 1.22
LMO4-202ENST00000370544 NFATC2IPQ8NCF5 419 aa22.66■■□□□ 1.22
LMO4-202ENST00000370544 SMARCC1Q92922 1105 aaPredicted RBP22.66■■□□□ 1.22
LMO4-202ENST00000370544 CARD14Q9BXL6 1004 aa22.66■■□□□ 1.22
LMO4-202ENST00000370544 PA2G4Q9UQ80 394 aaKnown RBP22.66■■□□□ 1.22
LMO4-202ENST00000370544 TTLL12Q14166 644 aaPredicted RBP22.65■■□□□ 1.22
LMO4-202ENST00000370544 C16orf71Q8IYS4 520 aaPredicted RBP22.65■■□□□ 1.22
LMO4-202ENST00000370544 CNNM2Q9H8M5 875 aa22.65■■□□□ 1.22
LMO4-202ENST00000370544 ZBTB43O43298 467 aa22.65■■□□□ 1.22
LMO4-202ENST00000370544 PRKCSHP14314 528 aaPredicted RBP22.65■■□□□ 1.22
LMO4-202ENST00000370544 IBSPP21815 317 aaPredicted RBP22.65■■□□□ 1.22
LMO4-202ENST00000370544 KIF4BQ2VIQ3 1234 aa22.65■■□□□ 1.22
LMO4-202ENST00000370544 LRRC2Q9BYS8 371 aa22.65■■□□□ 1.22
LMO4-202ENST00000370544 GBP3Q9H0R5 595 aa22.65■■□□□ 1.22
LMO4-202ENST00000370544 NEMFO60524 1076 aa22.65■■□□□ 1.22
LMO4-202ENST00000370544 MTIF2P46199 727 aaKnown RBP22.65■■□□□ 1.22
LMO4-202ENST00000370544 CCDC102BQ68D86 513 aa22.65■■□□□ 1.22
LMO4-202ENST00000370544 UBA7P41226 1012 aa22.65■■□□□ 1.22
LMO4-202ENST00000370544 KLHL40Q2TBA0 621 aa22.65■■□□□ 1.22
LMO4-202ENST00000370544 GSDMDP57764 484 aa22.64■■□□□ 1.22
LMO4-202ENST00000370544 ZGPATQ8N5A5 531 aaKnown RBP22.64■■□□□ 1.22
LMO4-202ENST00000370544 EYA1Q99502 592 aa22.64■■□□□ 1.22
LMO4-202ENST00000370544 UTP14AQ9BVJ6 771 aaKnown RBP22.64■■□□□ 1.22
LMO4-202ENST00000370544 TNNQ9UQP3 1299 aa22.64■■□□□ 1.22
LMO4-202ENST00000370544 NIP7Q9Y221 180 aaKnown RBP eCLIP22.64■■□□□ 1.22
LMO4-202ENST00000370544 URI1O94763 535 aaPredicted RBP22.64■■□□□ 1.21
LMO4-202ENST00000370544 TMC6Q7Z403 805 aa22.64■■□□□ 1.21
LMO4-202ENST00000370544 ESR2Q92731 530 aa22.64■■□□□ 1.21
LMO4-202ENST00000370544 IDEP14735 1019 aa22.64■■□□□ 1.21
LMO4-202ENST00000370544 DDB1Q16531 1140 aa22.64■■□□□ 1.21
LMO4-202ENST00000370544 WDR78Q5VTH9 848 aa22.64■■□□□ 1.21
LMO4-202ENST00000370544 CEP85Q6P2H3 762 aa22.64■■□□□ 1.21
LMO4-202ENST00000370544 PDCL2Q8N4E4 241 aa22.64■■□□□ 1.21
LMO4-202ENST00000370544 IQSEC3Q9UPP2 1182 aaPredicted RBP22.64■■□□□ 1.21
LMO4-202ENST00000370544 STX8Q9UNK0 236 aa22.64■■□□□ 1.21
LMO4-202ENST00000370544 TSPY3P0CV98 308 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 TSPY8P0CW00 308 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 CHMP4BP1P59074 171 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 NMIQ13287 307 aaPredicted RBP22.63■■□□□ 1.21
LMO4-202ENST00000370544 TDRD12Q587J7 1177 aaKnown RBP22.63■■□□□ 1.21
LMO4-202ENST00000370544 TMCO3Q6UWJ1 677 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 TCEANC2Q96MN5 208 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 NLRP3Q96P20 1036 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 TTC41PQ6P2S7 1318 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 NEBLO76041 1014 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 ZNF165P49910 485 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 PAG1Q9NWQ8 432 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 ADCY5O95622 1261 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 IFIT1BQ5T764 474 aaKnown RBP22.63■■□□□ 1.21
LMO4-202ENST00000370544 TMTC2Q8N394 836 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 PHACTR3Q96KR7 559 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 DNAI2Q9GZS0 605 aa22.63■■□□□ 1.21
LMO4-202ENST00000370544 YTHDC2Q9H6S0 1430 aaKnown RBP22.63■■□□□ 1.21
LMO4-202ENST00000370544 USO1O60763 962 aaKnown RBP22.63■■□□□ 1.21
LMO4-202ENST00000370544 SLC9C2Q5TAH2 1124 aa22.62■■□□□ 1.21
LMO4-202ENST00000370544 RBM25P49756 843 aaKnown RBP22.62■■□□□ 1.21
LMO4-202ENST00000370544 CCDC178Q5BJE1 867 aa22.62■■□□□ 1.21
LMO4-202ENST00000370544 Q6ZUG5 572 aa22.62■■□□□ 1.21
LMO4-202ENST00000370544 C19orf44Q9H6X5 657 aa22.62■■□□□ 1.21
LMO4-202ENST00000370544 HOXC9P31274 260 aa22.62■■□□□ 1.21
LMO4-202ENST00000370544 SIRT1Q96EB6 747 aa22.62■■□□□ 1.21
LMO4-202ENST00000370544 ALG1Q9BT22 464 aa22.62■■□□□ 1.21
LMO4-202ENST00000370544 GBP2P32456 591 aaPredicted RBP22.62■■□□□ 1.21
LMO4-202ENST00000370544 CCDC40Q4G0X9 1142 aa22.62■■□□□ 1.21
LMO4-202ENST00000370544 DZIP3Q86Y13 1208 aaKnown RBP22.62■■□□□ 1.21
LMO4-202ENST00000370544 KRT24Q2M2I5 525 aa22.61■■□□□ 1.21
LMO4-202ENST00000370544 CWF19L2Q2TBE0 894 aaKnown RBP22.61■■□□□ 1.21
LMO4-202ENST00000370544 DCTPP1Q9H773 170 aa22.61■■□□□ 1.21
LMO4-202ENST00000370544 WDHD1O75717 1129 aaPredicted RBP22.61■■□□□ 1.21
LMO4-202ENST00000370544 RTN1Q16799 776 aa22.61■■□□□ 1.21
LMO4-202ENST00000370544 ZSCAN23Q3MJ62 389 aa22.61■■□□□ 1.21
LMO4-202ENST00000370544 NAA16Q6N069 864 aaPredicted RBP22.61■■□□□ 1.21
LMO4-202ENST00000370544 FAM114A1Q8IWE2 563 aa22.61■■□□□ 1.21
LMO4-202ENST00000370544 ISM2Q6H9L7 571 aa22.61■■□□□ 1.21
LMO4-202ENST00000370544 CRACR2AQ9BSW2 395 aa22.61■■□□□ 1.21
LMO4-202ENST00000370544 GCP02774 474 aa22.6■■□□□ 1.21
LMO4-202ENST00000370544 DCAF5Q96JK2 942 aa22.6■■□□□ 1.21
LMO4-202ENST00000370544 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.6■■□□□ 1.21
LMO4-202ENST00000370544 TRMT1Q9NXH9 659 aaKnown RBP22.6■■□□□ 1.21
LMO4-202ENST00000370544 CAVIN2O95810 425 aa22.6■■□□□ 1.21
LMO4-202ENST00000370544 RLBP1P12271 317 aa22.6■■□□□ 1.21
LMO4-202ENST00000370544 TOM1O60784 492 aa22.6■■□□□ 1.21
LMO4-202ENST00000370544 UVSSAQ2YD98 709 aa22.6■■□□□ 1.21
LMO4-202ENST00000370544 CCDC150Q8NCX0 1101 aa22.6■■□□□ 1.21
LMO4-202ENST00000370544 TNNT1P13805 278 aa22.59■■□□□ 1.21
LMO4-202ENST00000370544 ZMYM3Q14202 1370 aa22.59■■□□□ 1.21
LMO4-202ENST00000370544 NBPF7P0C2Y1 421 aaPredicted RBP22.59■■□□□ 1.21
LMO4-202ENST00000370544 SYKP43405 635 aa22.59■■□□□ 1.21
LMO4-202ENST00000370544 LRRC27Q9C0I9 530 aa22.59■■□□□ 1.21
LMO4-202ENST00000370544 CNPY2Q9Y2B0 182 aa22.59■■□□□ 1.21
LMO4-202ENST00000370544 MYO1BO43795 1136 aa22.59■■□□□ 1.21
LMO4-202ENST00000370544 RNMTO43148 476 aaKnown RBP22.58■■□□□ 1.21
LMO4-202ENST00000370544 TAF3Q5VWG9 929 aa22.58■■□□□ 1.21
LMO4-202ENST00000370544 LIG1P18858 919 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms