RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 PPP1R15BQ5SWA1 713 aa5.47□□□□□ -1.53
CDR1-201ENST00000370532 BANK1Q8NDB2 785 aa5.47□□□□□ -1.53
CDR1-201ENST00000370532 BCORQ6W2J9 1755 aa5.47□□□□□ -1.53
CDR1-201ENST00000370532 KDM6AO15550 1401 aaPredicted RBP5.46□□□□□ -1.54
CDR1-201ENST00000370532 ATP10DQ9P241 1426 aa5.46□□□□□ -1.54
CDR1-201ENST00000370532 CAMK2BQ13554 666 aa5.46□□□□□ -1.54
CDR1-201ENST00000370532 AKAP4Q5JQC9 854 aa5.46□□□□□ -1.54
CDR1-201ENST00000370532 PIGBQ92521 554 aa5.46□□□□□ -1.54
CDR1-201ENST00000370532 TEX13AQ9BXU3 409 aaPredicted RBP5.46□□□□□ -1.54
CDR1-201ENST00000370532 GPHNQ9NQX3 736 aaPredicted RBP5.46□□□□□ -1.54
CDR1-201ENST00000370532 CCDC87Q9NVE4 849 aa5.46□□□□□ -1.54
CDR1-201ENST00000370532 FEZ2Q9UHY8 353 aaPredicted RBP5.46□□□□□ -1.54
CDR1-201ENST00000370532 A0A087WZG4 1122 aa5.46□□□□□ -1.54
CDR1-201ENST00000370532 GABBR2O75899 941 aa5.46□□□□□ -1.54
CDR1-201ENST00000370532 C1QTNF8P60827 252 aa5.46□□□□□ -1.54
CDR1-201ENST00000370532 LTV1Q96GA3 475 aaPredicted RBP5.46□□□□□ -1.54
CDR1-201ENST00000370532 CFAP53Q96M91 514 aa5.46□□□□□ -1.54
CDR1-201ENST00000370532 TMX1Q9H3N1 280 aa5.46□□□□□ -1.54
CDR1-201ENST00000370532 LAMB4A4D0S4 1761 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 KCPQ6ZWJ8 1503 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 DICER1Q9UPY3 1922 aaKnown RBP5.45□□□□□ -1.54
CDR1-201ENST00000370532 LMOD3Q0VAK6 560 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 WDR43Q15061 677 aaKnown RBP eCLIP5.45□□□□□ -1.54
CDR1-201ENST00000370532 GPR162Q16538 588 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 CSPP1Q1MSJ5 1256 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 ZNF592Q92610 1267 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 ATG3Q9NT62 314 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 ADAMTS8Q9UP79 889 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 ZKSCAN5Q9Y2L8 839 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 RTCBQ9Y3I0 505 aaKnown RBP5.45□□□□□ -1.54
CDR1-201ENST00000370532 EMILIN1Q9Y6C2 1016 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 HTATSF1O43719 755 aaKnown RBP5.45□□□□□ -1.54
CDR1-201ENST00000370532 GIGYF1O75420 1035 aaPredicted RBP5.45□□□□□ -1.54
CDR1-201ENST00000370532 PHF14O94880 888 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 IL13P35225 146 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 SEMA3FQ13275 785 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 C1orf141Q5JVX7 400 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 BCL2L12Q9HB09 334 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 SH3BP1Q9Y3L3 701 aa5.45□□□□□ -1.54
CDR1-201ENST00000370532 MYH14Q7Z406 1995 aaKnown RBP5.44□□□□□ -1.54
CDR1-201ENST00000370532 RIC1Q4ADV7 1423 aa5.44□□□□□ -1.54
CDR1-201ENST00000370532 PTMSP20962 102 aa5.44□□□□□ -1.54
CDR1-201ENST00000370532 FECHP22830 423 aa5.44□□□□□ -1.54
CDR1-201ENST00000370532 TRAPPC3LQ5T215 181 aa5.44□□□□□ -1.54
CDR1-201ENST00000370532 PDCL2Q8N4E4 241 aa5.44□□□□□ -1.54
CDR1-201ENST00000370532 KIF3AQ9Y496 699 aa5.44□□□□□ -1.54
CDR1-201ENST00000370532 CCDC66A2RUB6 948 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 ERICH4A6NGS2 130 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 GTF2F1P35269 517 aaKnown RBP eCLIP5.43□□□□□ -1.54
CDR1-201ENST00000370532 NOP2P46087 812 aaKnown RBP5.43□□□□□ -1.54
CDR1-201ENST00000370532 HS1BP3Q53T59 392 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 ASTLQ6HA08 431 aaPredicted RBP5.43□□□□□ -1.54
CDR1-201ENST00000370532 CENPQQ7L2Z9 268 aaPredicted RBP5.43□□□□□ -1.54
CDR1-201ENST00000370532 LINC00116Q8NCU8 138 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 SYTL4Q96C24 671 aaPredicted RBP5.43□□□□□ -1.54
CDR1-201ENST00000370532 PLCD4Q9BRC7 762 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 PDGFDQ9GZP0 370 aaPredicted RBP5.43□□□□□ -1.54
CDR1-201ENST00000370532 EFCC1Q9HA90 598 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 AFDNP55196 1824 aaKnown RBP5.43□□□□□ -1.54
CDR1-201ENST00000370532 EP400Q96L91 3159 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 IBTKQ9P2D0 1353 aaPredicted RBP5.43□□□□□ -1.54
CDR1-201ENST00000370532 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.43□□□□□ -1.54
CDR1-201ENST00000370532 DDX11L8A8MPP1 907 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 KIF3CO14782 793 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 DIAPH1O60610 1272 aaKnown RBP5.43□□□□□ -1.54
CDR1-201ENST00000370532 MCCP23508 829 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 ATP6V1AP38606 617 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 CABP4P57796 275 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 MPRIPQ6WCQ1 1025 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 GAS2L2Q8NHY3 880 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 CHMP5Q9NZZ3 219 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 USP42Q9H9J4 1324 aaKnown RBP5.43□□□□□ -1.54
CDR1-201ENST00000370532 SBF1O95248 1867 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 WDR90Q96KV7 1748 aa5.43□□□□□ -1.54
CDR1-201ENST00000370532 GABPB1Q06547 395 aaPredicted RBP5.42□□□□□ -1.54
CDR1-201ENST00000370532 ZNF530Q6P9A1 599 aaPredicted RBP5.42□□□□□ -1.54
CDR1-201ENST00000370532 PDLIM2Q96JY6 352 aa5.42□□□□□ -1.54
CDR1-201ENST00000370532 RSPH14Q9UHP6 348 aa5.42□□□□□ -1.54
CDR1-201ENST00000370532 SOS1Q07889 1333 aaPredicted RBP5.42□□□□□ -1.54
CDR1-201ENST00000370532 LTBP3Q9NS15 1303 aa5.42□□□□□ -1.54
CDR1-201ENST00000370532 FSTL1Q12841 308 aa5.42□□□□□ -1.54
CDR1-201ENST00000370532 ITPK1Q13572 414 aa5.42□□□□□ -1.54
CDR1-201ENST00000370532 PLPP6Q8IY26 295 aa5.42□□□□□ -1.54
CDR1-201ENST00000370532 RBM46Q8TBY0 533 aaKnown RBP5.42□□□□□ -1.54
CDR1-201ENST00000370532 RNF217Q8TC41 542 aa5.42□□□□□ -1.54
CDR1-201ENST00000370532 SLC52A2Q9HAB3 445 aa5.42□□□□□ -1.54
CDR1-201ENST00000370532 CEP83Q9Y592 693 aa5.42□□□□□ -1.54
CDR1-201ENST00000370532 PARP3Q9Y6F1 533 aa5.42□□□□□ -1.54
CDR1-201ENST00000370532 CEMIPQ8WUJ3 1361 aa5.42□□□□□ -1.54
CDR1-201ENST00000370532 U2SURPO15042 1029 aaKnown RBP5.41□□□□□ -1.54
CDR1-201ENST00000370532 ZMYND10O75800 440 aa5.41□□□□□ -1.54
CDR1-201ENST00000370532 U2AF1L5P0DN76 240 aaPredicted RBP5.41□□□□□ -1.54
CDR1-201ENST00000370532 GTF2A1P52655 376 aaPredicted RBP5.41□□□□□ -1.54
CDR1-201ENST00000370532 GYS2P54840 703 aa5.41□□□□□ -1.54
CDR1-201ENST00000370532 U2AF1Q01081 240 aaKnown RBP eCLIP5.41□□□□□ -1.54
CDR1-201ENST00000370532 DNAJC21Q5F1R6 531 aaKnown RBP5.41□□□□□ -1.54
CDR1-201ENST00000370532 SOGA3Q5TF21 947 aa5.41□□□□□ -1.54
CDR1-201ENST00000370532 USHBP1Q8N6Y0 703 aa5.41□□□□□ -1.54
CDR1-201ENST00000370532 CDCA7LQ96GN5 454 aa5.41□□□□□ -1.54
CDR1-201ENST00000370532 MYCBPQ99417 103 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms