RNA–Protein interactions for RNA: ENST00000370137.5

LRRC39-202, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC39, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-202ENST00000370137 INPP5FQ9Y2H2 1132 aa8.12□□□□□ -1.11
LRRC39-202ENST00000370137 PPFIA3O75145 1194 aa8.11□□□□□ -1.11
LRRC39-202ENST00000370137 PDE3BQ13370 1112 aa8.11□□□□□ -1.11
LRRC39-202ENST00000370137 SLFNL1Q499Z3 407 aa8.11□□□□□ -1.11
LRRC39-202ENST00000370137 TTC39BQ5VTQ0 682 aaPredicted RBP8.11□□□□□ -1.11
LRRC39-202ENST00000370137 WDR75Q8IWA0 830 aaKnown RBP8.11□□□□□ -1.11
LRRC39-202ENST00000370137 TRIM52Q96A61 297 aa8.11□□□□□ -1.11
LRRC39-202ENST00000370137 EID1Q9Y6B2 187 aa8.11□□□□□ -1.11
LRRC39-202ENST00000370137 FAM196BA6NMK8 535 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 ICMTO60725 284 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 VSIG8P0DPA2 414 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 GMPRP36959 345 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 GNALP38405 381 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 ERVK-9P63128 1117 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 FERMT3Q86UX7 667 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 FAM200AQ8TCP9 573 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 TSR2Q969E8 191 aaKnown RBP8.1□□□□□ -1.11
LRRC39-202ENST00000370137 THRAP3Q9Y2W1 955 aaKnown RBP8.1□□□□□ -1.11
LRRC39-202ENST00000370137 TTC36A6NLP5 189 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 IFRD1O00458 451 aaPredicted RBP8.1□□□□□ -1.11
LRRC39-202ENST00000370137 CLGNO14967 610 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 NRDCO43847 1150 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 FOSP01100 380 aaPredicted RBP8.1□□□□□ -1.11
LRRC39-202ENST00000370137 FGAP02671 866 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 DEKP35659 375 aaKnown RBP8.1□□□□□ -1.11
LRRC39-202ENST00000370137 HDAC1Q13547 482 aaPredicted RBP8.1□□□□□ -1.11
LRRC39-202ENST00000370137 CRTC2Q53ET0 693 aaPredicted RBP8.1□□□□□ -1.11
LRRC39-202ENST00000370137 EFCAB2Q5VUJ9 269 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 MCF2L2Q86YR7 1114 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 RGL4Q8IZJ4 473 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.1□□□□□ -1.11
LRRC39-202ENST00000370137 RNF217Q8TC41 542 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 ZNF622Q969S3 477 aaKnown RBP eCLIP8.1□□□□□ -1.11
LRRC39-202ENST00000370137 CEP89Q96ST8 783 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 ZHX3Q9H4I2 956 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 CEP126Q9P2H0 1117 aa8.1□□□□□ -1.11
LRRC39-202ENST00000370137 RB1CC1Q8TDY2 1594 aa8.09□□□□□ -1.11
LRRC39-202ENST00000370137 USP17L3A6NCW0 530 aa8.09□□□□□ -1.12
LRRC39-202ENST00000370137 USP17L4A6NCW7 530 aa8.09□□□□□ -1.12
LRRC39-202ENST00000370137 DHX16O60231 1041 aaKnown RBP8.09□□□□□ -1.12
LRRC39-202ENST00000370137 PTSQ03393 145 aa8.09□□□□□ -1.12
LRRC39-202ENST00000370137 PLEKHG4Q58EX7 1191 aa8.09□□□□□ -1.12
LRRC39-202ENST00000370137 SYCP2LQ5T4T6 812 aa8.09□□□□□ -1.12
LRRC39-202ENST00000370137 USP17L2Q6R6M4 530 aa8.09□□□□□ -1.12
LRRC39-202ENST00000370137 ARMCX6Q7L4S7 300 aa8.09□□□□□ -1.12
LRRC39-202ENST00000370137 USP17L1Q7RTZ2 530 aa8.09□□□□□ -1.12
LRRC39-202ENST00000370137 PAF1Q8N7H5 531 aa8.09□□□□□ -1.12
LRRC39-202ENST00000370137 PPM1EQ8WY54 764 aa8.09□□□□□ -1.12
LRRC39-202ENST00000370137 RELTQ969Z4 430 aa8.09□□□□□ -1.12
LRRC39-202ENST00000370137 RNPC3Q96LT9 517 aaKnown RBP8.09□□□□□ -1.12
LRRC39-202ENST00000370137 ARPC5LQ9BPX5 153 aa8.09□□□□□ -1.12
LRRC39-202ENST00000370137 SLKQ9H2G2 1235 aaPredicted RBP8.09□□□□□ -1.12
LRRC39-202ENST00000370137 POLMQ9NP87 494 aaPredicted RBP8.09□□□□□ -1.12
LRRC39-202ENST00000370137 TNFRSF10BO14763 440 aa8.08□□□□□ -1.12
LRRC39-202ENST00000370137 SCTRP47872 440 aa8.08□□□□□ -1.12
LRRC39-202ENST00000370137 L1TD1Q5T7N2 865 aaKnown RBP8.08□□□□□ -1.12
LRRC39-202ENST00000370137 CCDC174Q6PII3 467 aa8.08□□□□□ -1.12
LRRC39-202ENST00000370137 RAVER1Q8IY67 606 aaKnown RBP8.08□□□□□ -1.12
LRRC39-202ENST00000370137 APBA2Q99767 749 aa8.08□□□□□ -1.12
LRRC39-202ENST00000370137 CASS4Q9NQ75 786 aa8.08□□□□□ -1.12
LRRC39-202ENST00000370137 AVENQ9NQS1 362 aaPredicted RBP8.08□□□□□ -1.12
LRRC39-202ENST00000370137 KLF15Q9UIH9 416 aa8.08□□□□□ -1.12
LRRC39-202ENST00000370137 NUB1Q9Y5A7 615 aa8.08□□□□□ -1.12
LRRC39-202ENST00000370137 PCDHB11Q9Y5F2 797 aa8.08□□□□□ -1.12
LRRC39-202ENST00000370137 SLC35F4A4IF30 521 aa8.07□□□□□ -1.12
LRRC39-202ENST00000370137 ATP5J2-PTCD1G3V325 749 aa8.07□□□□□ -1.12
LRRC39-202ENST00000370137 PIK3CDO00329 1044 aa8.07□□□□□ -1.12
LRRC39-202ENST00000370137 KIF3BO15066 747 aa8.07□□□□□ -1.12
LRRC39-202ENST00000370137 INSM1Q01101 510 aaPredicted RBP8.07□□□□□ -1.12
LRRC39-202ENST00000370137 BRD3Q15059 726 aa8.07□□□□□ -1.12
LRRC39-202ENST00000370137 MAPRE1Q15691 268 aaKnown RBP8.07□□□□□ -1.12
LRRC39-202ENST00000370137 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.07□□□□□ -1.12
LRRC39-202ENST00000370137 C1orf216Q8TAB5 229 aa8.07□□□□□ -1.12
LRRC39-202ENST00000370137 SLC39A13Q96H72 371 aa8.07□□□□□ -1.12
LRRC39-202ENST00000370137 NEUROD6Q96NK8 337 aa8.07□□□□□ -1.12
LRRC39-202ENST00000370137 PCGF6Q9BYE7 350 aa8.07□□□□□ -1.12
LRRC39-202ENST00000370137 CHMP4BQ9H444 224 aaKnown RBP8.07□□□□□ -1.12
LRRC39-202ENST00000370137 VTI1BQ9UEU0 232 aa8.07□□□□□ -1.12
LRRC39-202ENST00000370137 TIMM44O43615 452 aa8.06□□□□□ -1.12
LRRC39-202ENST00000370137 CAND2O75155 1236 aa8.06□□□□□ -1.12
LRRC39-202ENST00000370137 RNF144AP50876 292 aaPredicted RBP8.06□□□□□ -1.12
LRRC39-202ENST00000370137 EIF4G2P78344 907 aaKnown RBP eCLIP8.06□□□□□ -1.12
LRRC39-202ENST00000370137 VPS72Q15906 364 aa8.06□□□□□ -1.12
LRRC39-202ENST00000370137 CCDC184Q52MB2 194 aa8.06□□□□□ -1.12
LRRC39-202ENST00000370137 PPP4R4Q6NUP7 873 aa8.06□□□□□ -1.12
LRRC39-202ENST00000370137 NBPF11Q86T75 865 aa8.06□□□□□ -1.12
LRRC39-202ENST00000370137 PHTF2Q8N3S3 785 aa8.06□□□□□ -1.12
LRRC39-202ENST00000370137 SAMD3Q8N6K7 520 aa8.06□□□□□ -1.12
LRRC39-202ENST00000370137 ENOX1Q8TC92 643 aaKnown RBP8.06□□□□□ -1.12
LRRC39-202ENST00000370137 TSPAN18Q96SJ8 248 aa8.06□□□□□ -1.12
LRRC39-202ENST00000370137 OSBPL3Q9H4L5 887 aa8.06□□□□□ -1.12
LRRC39-202ENST00000370137 PARP2Q9UGN5 583 aa8.06□□□□□ -1.12
LRRC39-202ENST00000370137 MKRN1Q9UHC7 482 aaKnown RBP8.06□□□□□ -1.12
LRRC39-202ENST00000370137 ANAPC4Q9UJX5 808 aa8.06□□□□□ -1.12
LRRC39-202ENST00000370137 GOLGA6CA6NDK9 693 aa8.05□□□□□ -1.12
LRRC39-202ENST00000370137 GOLGA6BA6NDN3 693 aa8.05□□□□□ -1.12
LRRC39-202ENST00000370137 NPHP1O15259 732 aa8.05□□□□□ -1.12
LRRC39-202ENST00000370137 C21orf2O43822 256 aa8.05□□□□□ -1.12
LRRC39-202ENST00000370137 SORBS3O60504 671 aa8.05□□□□□ -1.12
LRRC39-202ENST00000370137 KRT18P05783 430 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms