RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 CWF19L2Q2TBE0 894 aaKnown RBP23.51■■□□□ 1.35
CHTOP-202ENST00000368687 CCDC152Q4G0S7 254 aa23.51■■□□□ 1.35
CHTOP-202ENST00000368687 MRPL50Q8N5N7 158 aaKnown RBP23.51■■□□□ 1.35
CHTOP-202ENST00000368687 SSH1Q8WYL5 1049 aa23.51■■□□□ 1.35
CHTOP-202ENST00000368687 KIF3CO14782 793 aa23.5■■□□□ 1.35
CHTOP-202ENST00000368687 RTL5Q5HYW3 569 aaPredicted RBP23.5■■□□□ 1.35
CHTOP-202ENST00000368687 PSMD1Q99460 953 aa23.5■■□□□ 1.35
CHTOP-202ENST00000368687 SMC4Q9NTJ3 1288 aa23.5■■□□□ 1.35
CHTOP-202ENST00000368687 TIAM2Q8IVF5 1701 aa23.5■■□□□ 1.35
CHTOP-202ENST00000368687 BRPF1P55201 1214 aaPredicted RBP23.49■■□□□ 1.35
CHTOP-202ENST00000368687 ATP6V0A2Q9Y487 856 aa23.49■■□□□ 1.35
CHTOP-202ENST00000368687 H7C1W4 665 aa23.48■■□□□ 1.35
CHTOP-202ENST00000368687 ALDH1L1O75891 902 aa23.48■■□□□ 1.35
CHTOP-202ENST00000368687 BEND3Q5T5X7 828 aa23.48■■□□□ 1.35
CHTOP-202ENST00000368687 F6X3S4 739 aa23.47■■□□□ 1.35
CHTOP-202ENST00000368687 UBE3BQ7Z3V4 1068 aa23.47■■□□□ 1.35
CHTOP-202ENST00000368687 SP8Q8IXZ3 490 aa23.47■■□□□ 1.35
CHTOP-202ENST00000368687 LRRC37AA6NMS7 1700 aa23.46■■□□□ 1.35
CHTOP-202ENST00000368687 CTSWP56202 376 aa23.46■■□□□ 1.35
CHTOP-202ENST00000368687 KDM2BQ8NHM5 1336 aa23.46■■□□□ 1.35
CHTOP-202ENST00000368687 SNED1Q8TER0 1413 aa23.46■■□□□ 1.35
CHTOP-202ENST00000368687 PLA2G12BQ9BX93 195 aa23.46■■□□□ 1.35
CHTOP-202ENST00000368687 SRCIN1Q9C0H9 1055 aa23.46■■□□□ 1.35
CHTOP-202ENST00000368687 NMRK2Q9NPI5 230 aa23.46■■□□□ 1.35
CHTOP-202ENST00000368687 RTL9Q8NET4 1388 aa23.45■■□□□ 1.34
CHTOP-202ENST00000368687 KIF16BQ96L93 1317 aa23.45■■□□□ 1.34
CHTOP-202ENST00000368687 SUPT20HQ8NEM7 779 aa23.45■■□□□ 1.34
CHTOP-202ENST00000368687 VPS33BQ9H267 617 aa23.45■■□□□ 1.34
CHTOP-202ENST00000368687 SLC4A10Q6U841 1118 aa23.44■■□□□ 1.34
CHTOP-202ENST00000368687 CDC5LQ99459 802 aaKnown RBP23.43■■□□□ 1.34
CHTOP-202ENST00000368687 BCL2L13Q9BXK5 485 aa23.43■■□□□ 1.34
CHTOP-202ENST00000368687 GRM8O00222 908 aa23.42■■□□□ 1.34
CHTOP-202ENST00000368687 RARSP54136 660 aaKnown RBP23.42■■□□□ 1.34
CHTOP-202ENST00000368687 RPS8P62241 208 aaKnown RBP23.42■■□□□ 1.34
CHTOP-202ENST00000368687 C9orf78Q9NZ63 289 aaPredicted RBP23.42■■□□□ 1.34
CHTOP-202ENST00000368687 TAF1P21675 1872 aa23.42■■□□□ 1.34
CHTOP-202ENST00000368687 CEP350Q5VT06 3117 aa23.42■■□□□ 1.34
CHTOP-202ENST00000368687 IARSP41252 1262 aaKnown RBP23.41■■□□□ 1.34
CHTOP-202ENST00000368687 DPY19L2Q6NUT2 758 aa23.41■■□□□ 1.34
CHTOP-202ENST00000368687 API5Q9BZZ5 524 aaKnown RBP23.41■■□□□ 1.34
CHTOP-202ENST00000368687 CASP7P55210 303 aa23.4■■□□□ 1.34
CHTOP-202ENST00000368687 OLFM4Q6UX06 510 aa23.4■■□□□ 1.34
CHTOP-202ENST00000368687 DPP8Q6V1X1 898 aaPredicted RBP23.4■■□□□ 1.34
CHTOP-202ENST00000368687 MPNDQ8N594 471 aa23.4■■□□□ 1.34
CHTOP-202ENST00000368687 TTLL11Q8NHH1 800 aa23.4■■□□□ 1.34
CHTOP-202ENST00000368687 ARHGAP45Q92619 1136 aa23.4■■□□□ 1.34
CHTOP-202ENST00000368687 RTFDC1Q9BY42 306 aaPredicted RBP23.4■■□□□ 1.34
CHTOP-202ENST00000368687 ZNF277Q9NRM2 450 aaPredicted RBP23.4■■□□□ 1.34
CHTOP-202ENST00000368687 ANKRD18AQ8IVF6 992 aa23.39■■□□□ 1.33
CHTOP-202ENST00000368687 JDP2Q8WYK2 163 aa23.39■■□□□ 1.33
CHTOP-202ENST00000368687 JARID2Q92833 1246 aaPredicted RBP23.39■■□□□ 1.33
CHTOP-202ENST00000368687 CELF1Q92879 486 aaKnown RBP23.39■■□□□ 1.33
CHTOP-202ENST00000368687 GLTPD2A6NH11 291 aa23.38■■□□□ 1.33
CHTOP-202ENST00000368687 IPO8O15397 1037 aaKnown RBP23.38■■□□□ 1.33
CHTOP-202ENST00000368687 CCT4P50991 539 aaKnown RBP23.37■■□□□ 1.33
CHTOP-202ENST00000368687 UTYO14607 1347 aa23.36■■□□□ 1.33
CHTOP-202ENST00000368687 CSF1RP07333 972 aa23.36■■□□□ 1.33
CHTOP-202ENST00000368687 SEC31BQ9NQW1 1179 aa23.36■■□□□ 1.33
CHTOP-202ENST00000368687 NOB1Q9ULX3 412 aaKnown RBP23.36■■□□□ 1.33
CHTOP-202ENST00000368687 LARGE2Q8N3Y3 721 aa23.35■■□□□ 1.33
CHTOP-202ENST00000368687 GREM2Q9H772 168 aa23.35■■□□□ 1.33
CHTOP-202ENST00000368687 RRAGCQ9HB90 399 aa23.35■■□□□ 1.33
CHTOP-202ENST00000368687 TOMM70O94826 608 aa23.34■■□□□ 1.33
CHTOP-202ENST00000368687 IGHMBP2P38935 993 aaKnown RBP23.34■■□□□ 1.33
CHTOP-202ENST00000368687 SLC51AQ86UW1 340 aa23.34■■□□□ 1.33
CHTOP-202ENST00000368687 BSDC1Q9NW68 430 aaPredicted RBP23.34■■□□□ 1.33
CHTOP-202ENST00000368687 HDAC5Q9UQL6 1122 aa23.34■■□□□ 1.33
CHTOP-202ENST00000368687 LTBP1Q14766 1721 aa23.33■■□□□ 1.33
CHTOP-202ENST00000368687 PPIP5K2O43314 1243 aa23.33■■□□□ 1.33
CHTOP-202ENST00000368687 CCDC85AQ96PX6 553 aaPredicted RBP23.33■■□□□ 1.33
CHTOP-202ENST00000368687 EYA3Q99504 573 aa23.33■■□□□ 1.33
CHTOP-202ENST00000368687 PODXL2Q9NZ53 605 aa23.33■■□□□ 1.33
CHTOP-202ENST00000368687 NSFL1CQ9UNZ2 370 aaKnown RBP23.33■■□□□ 1.33
CHTOP-202ENST00000368687 WDR90Q96KV7 1748 aa23.33■■□□□ 1.32
CHTOP-202ENST00000368687 ANKRD18BA2A2Z9 1011 aa23.32■■□□□ 1.32
CHTOP-202ENST00000368687 ITGA6P23229 1130 aa23.32■■□□□ 1.32
CHTOP-202ENST00000368687 IFIT5Q13325 482 aaKnown RBP23.32■■□□□ 1.32
CHTOP-202ENST00000368687 NIM1KQ8IY84 436 aa23.32■■□□□ 1.32
CHTOP-202ENST00000368687 DUOX1Q9NRD9 1551 aa23.31■■□□□ 1.32
CHTOP-202ENST00000368687 SPEF2Q9C093 1822 aa23.31■■□□□ 1.32
CHTOP-202ENST00000368687 FZD9O00144 591 aa23.31■■□□□ 1.32
CHTOP-202ENST00000368687 EIF6P56537 245 aaKnown RBP23.31■■□□□ 1.32
CHTOP-202ENST00000368687 KIAA2012Q0VF49 1180 aa23.31■■□□□ 1.32
CHTOP-202ENST00000368687 FAM161AQ3B820 660 aa23.31■■□□□ 1.32
CHTOP-202ENST00000368687 MPHOSPH8Q99549 860 aa23.31■■□□□ 1.32
CHTOP-202ENST00000368687 ANKIB1Q9P2G1 1089 aa23.31■■□□□ 1.32
CHTOP-202ENST00000368687 XDHP47989 1333 aa23.31■■□□□ 1.32
CHTOP-202ENST00000368687 COL4A1P02462 1669 aa23.3■■□□□ 1.32
CHTOP-202ENST00000368687 HSPA6P17066 643 aa23.3■■□□□ 1.32
CHTOP-202ENST00000368687 FOXO4P98177 505 aa23.3■■□□□ 1.32
CHTOP-202ENST00000368687 VEGFAP15692 232 aaPredicted RBP23.29■■□□□ 1.32
CHTOP-202ENST00000368687 CCDC57Q2TAC2 916 aa23.29■■□□□ 1.32
CHTOP-202ENST00000368687 C16orf71Q8IYS4 520 aaPredicted RBP23.29■■□□□ 1.32
CHTOP-202ENST00000368687 GGA1Q9UJY5 639 aa23.29■■□□□ 1.32
CHTOP-202ENST00000368687 CHMP3Q9Y3E7 222 aa23.29■■□□□ 1.32
CHTOP-202ENST00000368687 SCN4AP35499 1836 aa23.29■■□□□ 1.32
CHTOP-202ENST00000368687 IQCA1LA6NCM1 817 aa23.28■■□□□ 1.32
CHTOP-202ENST00000368687 C6orf229H3BNL8 230 aa23.28■■□□□ 1.32
CHTOP-202ENST00000368687 NBPF7P0C2Y1 421 aaPredicted RBP23.28■■□□□ 1.32
CHTOP-202ENST00000368687 GPSM2P81274 684 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms