RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 DEFB115Q30KQ5 88 aa12.8□□□□□ -0.36
TPM3-210ENST00000368530 DDX21Q9NR30 783 aaKnown RBP eCLIP12.8□□□□□ -0.36
TPM3-210ENST00000368530 GJA3Q9Y6H8 435 aa12.8□□□□□ -0.36
TPM3-210ENST00000368530 PPEF1O14829 653 aaPredicted RBP12.79□□□□□ -0.36
TPM3-210ENST00000368530 CTCFP49711 727 aaPredicted RBP12.79□□□□□ -0.36
TPM3-210ENST00000368530 EIF6P56537 245 aaKnown RBP12.79□□□□□ -0.36
TPM3-210ENST00000368530 RIPK4P57078 832 aa12.79□□□□□ -0.36
TPM3-210ENST00000368530 CCDC27Q2M243 656 aa12.79□□□□□ -0.36
TPM3-210ENST00000368530 LARGE2Q8N3Y3 721 aa12.79□□□□□ -0.36
TPM3-210ENST00000368530 RBM17Q96I25 401 aaKnown RBP12.79□□□□□ -0.36
TPM3-210ENST00000368530 TCERG1O14776 1098 aaKnown RBP12.78□□□□□ -0.36
TPM3-210ENST00000368530 PLIN1O60240 522 aa12.78□□□□□ -0.36
TPM3-210ENST00000368530 PARP10Q53GL7 1025 aa12.78□□□□□ -0.36
TPM3-210ENST00000368530 CST9Q5W186 159 aa12.78□□□□□ -0.36
TPM3-210ENST00000368530 WDR63Q8IWG1 891 aa12.78□□□□□ -0.36
TPM3-210ENST00000368530 RTFDC1Q9BY42 306 aaPredicted RBP12.78□□□□□ -0.36
TPM3-210ENST00000368530 ATP6V0A2Q9Y487 856 aa12.78□□□□□ -0.36
TPM3-210ENST00000368530 WDR33Q9C0J8 1336 aaKnown RBP12.78□□□□□ -0.36
TPM3-210ENST00000368530 ANXA1P04083 346 aa12.78□□□□□ -0.36
TPM3-210ENST00000368530 LBX1P52954 281 aa12.78□□□□□ -0.36
TPM3-210ENST00000368530 ERICH6BQ5W0A0 696 aa12.78□□□□□ -0.36
TPM3-210ENST00000368530 PPP1R42Q7Z4L9 355 aa12.78□□□□□ -0.36
TPM3-210ENST00000368530 NLRP3Q96P20 1036 aa12.78□□□□□ -0.36
TPM3-210ENST00000368530 PPP4R2Q9NY27 417 aa12.78□□□□□ -0.36
TPM3-210ENST00000368530 TSPYL4Q9UJ04 414 aa12.78□□□□□ -0.36
TPM3-210ENST00000368530 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
TPM3-210ENST00000368530 ABCC4O15439 1325 aa12.77□□□□□ -0.37
TPM3-210ENST00000368530 HSPA8P11142 646 aaKnown RBP12.77□□□□□ -0.37
TPM3-210ENST00000368530 EIF2S2P20042 333 aaKnown RBP12.77□□□□□ -0.37
TPM3-210ENST00000368530 CXCL9Q07325 125 aa12.77□□□□□ -0.37
TPM3-210ENST00000368530 USP50Q70EL3 339 aaPredicted RBP12.77□□□□□ -0.37
TPM3-210ENST00000368530 UTP14AQ9BVJ6 771 aaKnown RBP12.77□□□□□ -0.37
TPM3-210ENST00000368530 VPS33BQ9H267 617 aa12.77□□□□□ -0.37
TPM3-210ENST00000368530 BABAM1Q9NWV8 329 aa12.77□□□□□ -0.37
TPM3-210ENST00000368530 TRAF5O00463 557 aa12.76□□□□□ -0.37
TPM3-210ENST00000368530 AOC3Q16853 763 aa12.76□□□□□ -0.37
TPM3-210ENST00000368530 NLRP10Q86W26 655 aa12.76□□□□□ -0.37
TPM3-210ENST00000368530 GPRC5DQ9NZD1 345 aa12.76□□□□□ -0.37
TPM3-210ENST00000368530 PPIP5K2O43314 1243 aa12.75□□□□□ -0.37
TPM3-210ENST00000368530 LMOD1P29536 600 aaPredicted RBP12.75□□□□□ -0.37
TPM3-210ENST00000368530 COPS6Q7L5N1 327 aa12.75□□□□□ -0.37
TPM3-210ENST00000368530 SP8Q8IXZ3 490 aa12.75□□□□□ -0.37
TPM3-210ENST00000368530 NIM1KQ8IY84 436 aa12.75□□□□□ -0.37
TPM3-210ENST00000368530 AIDAQ96BJ3 306 aa12.75□□□□□ -0.37
TPM3-210ENST00000368530 PGAP2Q9UHJ9 254 aa12.75□□□□□ -0.37
TPM3-210ENST00000368530 ZNRF3Q9ULT6 936 aa12.75□□□□□ -0.37
TPM3-210ENST00000368530 BBOX1O75936 387 aa12.74□□□□□ -0.37
TPM3-210ENST00000368530 HCLS1P14317 486 aaPredicted RBP12.74□□□□□ -0.37
TPM3-210ENST00000368530 MAP2K1Q02750 393 aaPredicted RBP12.74□□□□□ -0.37
TPM3-210ENST00000368530 B4GALNT3Q6L9W6 998 aa12.74□□□□□ -0.37
TPM3-210ENST00000368530 TSR2Q969E8 191 aaKnown RBP12.74□□□□□ -0.37
TPM3-210ENST00000368530 ADARB2Q9NS39 739 aaKnown RBP12.74□□□□□ -0.37
TPM3-210ENST00000368530 ABT1Q9ULW3 272 aaKnown RBP12.74□□□□□ -0.37
TPM3-210ENST00000368530 HIRAP54198 1017 aaPredicted RBP12.73□□□□□ -0.37
TPM3-210ENST00000368530 KIAA2012Q0VF49 1180 aa12.73□□□□□ -0.37
TPM3-210ENST00000368530 TCIRG1Q13488 830 aa12.73□□□□□ -0.37
TPM3-210ENST00000368530 KRT24Q2M2I5 525 aa12.73□□□□□ -0.37
TPM3-210ENST00000368530 CYP4F22Q6NT55 531 aa12.73□□□□□ -0.37
TPM3-210ENST00000368530 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
TPM3-210ENST00000368530 CAPNS2Q96L46 248 aa12.73□□□□□ -0.37
TPM3-210ENST00000368530 MYH16Q9H6N6 1097 aa12.73□□□□□ -0.37
TPM3-210ENST00000368530 TLL2Q9Y6L7 1015 aa12.73□□□□□ -0.37
TPM3-210ENST00000368530 THSD7BQ9C0I4 1608 aa12.73□□□□□ -0.37
TPM3-210ENST00000368530 CHL1O00533 1208 aa12.72□□□□□ -0.37
TPM3-210ENST00000368530 EXOC6Q8TAG9 804 aa12.72□□□□□ -0.37
TPM3-210ENST00000368530 NECTIN2Q92692 538 aa12.72□□□□□ -0.37
TPM3-210ENST00000368530 LAS1LQ9Y4W2 734 aaKnown RBP12.72□□□□□ -0.37
TPM3-210ENST00000368530 FANCIQ9NVI1 1328 aa12.72□□□□□ -0.37
TPM3-210ENST00000368530 YDJCA8MPS7 323 aa12.72□□□□□ -0.37
TPM3-210ENST00000368530 BCAR3O75815 825 aa12.72□□□□□ -0.37
TPM3-210ENST00000368530 GMPSP49915 693 aaPredicted RBP12.72□□□□□ -0.37
TPM3-210ENST00000368530 AIMP1Q12904 312 aaKnown RBP12.72□□□□□ -0.37
TPM3-210ENST00000368530 MPNDQ8N594 471 aa12.72□□□□□ -0.37
TPM3-210ENST00000368530 SUPT20HQ8NEM7 779 aa12.72□□□□□ -0.37
TPM3-210ENST00000368530 GPR101Q96P66 508 aaPredicted RBP12.72□□□□□ -0.37
TPM3-210ENST00000368530 SPDYE4A6NLX3 237 aa12.71□□□□□ -0.38
TPM3-210ENST00000368530 GRAPQ13588 217 aa12.71□□□□□ -0.38
TPM3-210ENST00000368530 HSP90AB3PQ58FF7 597 aa12.71□□□□□ -0.38
TPM3-210ENST00000368530 C20orf194Q5TEA3 1177 aa12.71□□□□□ -0.38
TPM3-210ENST00000368530 DPP8Q6V1X1 898 aaPredicted RBP12.71□□□□□ -0.38
TPM3-210ENST00000368530 SAPCD2Q86UD0 394 aa12.71□□□□□ -0.38
TPM3-210ENST00000368530 GRAPLQ8TC17 118 aaPredicted RBP12.71□□□□□ -0.38
TPM3-210ENST00000368530 TRMT112Q9UI30 125 aaKnown RBP12.71□□□□□ -0.38
TPM3-210ENST00000368530 DUOX1Q9NRD9 1551 aa12.7□□□□□ -0.38
TPM3-210ENST00000368530 SHTN1A0MZ66 631 aa12.7□□□□□ -0.38
TPM3-210ENST00000368530 AOC2O75106 756 aa12.7□□□□□ -0.38
TPM3-210ENST00000368530 RAD17O75943 681 aa12.7□□□□□ -0.38
TPM3-210ENST00000368530 CIAPIN1Q6FI81 312 aa12.7□□□□□ -0.38
TPM3-210ENST00000368530 ABHD8Q96I13 439 aa12.7□□□□□ -0.38
TPM3-210ENST00000368530 CRBNQ96SW2 442 aa12.7□□□□□ -0.38
TPM3-210ENST00000368530 GLIS2Q9BZE0 524 aaPredicted RBP12.7□□□□□ -0.38
TPM3-210ENST00000368530 LAMB2P55268 1798 aa12.7□□□□□ -0.38
TPM3-210ENST00000368530 IL16Q14005 1332 aa12.7□□□□□ -0.38
TPM3-210ENST00000368530 SH3TC1Q8TE82 1336 aa12.7□□□□□ -0.38
TPM3-210ENST00000368530 CDHR2Q9BYE9 1310 aa12.7□□□□□ -0.38
TPM3-210ENST00000368530 MAP2K2P36507 400 aa12.69□□□□□ -0.38
TPM3-210ENST00000368530 ECE1P42892 770 aa12.69□□□□□ -0.38
TPM3-210ENST00000368530 EXOSC9Q06265 439 aaKnown RBP12.69□□□□□ -0.38
TPM3-210ENST00000368530 DDX46Q7L014 1031 aaKnown RBP12.69□□□□□ -0.38
TPM3-210ENST00000368530 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms