RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 TRAK2O60296 914 aa30.02■■■□□ 2.4
CLK2-203ENST00000368361 IL6STP40189 918 aaPredicted RBP30.02■■■□□ 2.4
CLK2-203ENST00000368361 HSP90AB3PQ58FF7 597 aa30.02■■■□□ 2.4
CLK2-203ENST00000368361 PRPF40BQ6NWY9 871 aaKnown RBP30.02■■■□□ 2.4
CLK2-203ENST00000368361 BARGINQ6ZT62 677 aa30.02■■■□□ 2.4
CLK2-203ENST00000368361 CCDC85AQ96PX6 553 aaPredicted RBP30.02■■■□□ 2.4
CLK2-203ENST00000368361 HAUS7Q99871 368 aa30.02■■■□□ 2.4
CLK2-203ENST00000368361 TBC1D2BQ9UPU7 963 aa30.01■■■□□ 2.39
CLK2-203ENST00000368361 NUP98P52948 1817 aa30.01■■■□□ 2.39
CLK2-203ENST00000368361 NECTIN1Q15223 517 aa30■■■□□ 2.39
CLK2-203ENST00000368361 DZIP3Q86Y13 1208 aaKnown RBP30■■■□□ 2.39
CLK2-203ENST00000368361 IL27Q8NEV9 243 aa30■■■□□ 2.39
CLK2-203ENST00000368361 ZNF609O15014 1411 aa30■■■□□ 2.39
CLK2-203ENST00000368361 MED23Q9ULK4 1368 aa30■■■□□ 2.39
CLK2-203ENST00000368361 CSF1RP07333 972 aa30■■■□□ 2.39
CLK2-203ENST00000368361 MAP4K1Q92918 833 aa30■■■□□ 2.39
CLK2-203ENST00000368361 TTC14Q96N46 770 aa30■■■□□ 2.39
CLK2-203ENST00000368361 CLEC17AQ6ZS10 378 aa29.99■■■□□ 2.39
CLK2-203ENST00000368361 RBM8AQ9Y5S9 174 aaKnown RBP29.99■■■□□ 2.39
CLK2-203ENST00000368361 CDHR2Q9BYE9 1310 aa29.99■■■□□ 2.39
CLK2-203ENST00000368361 ZNF589Q86UQ0 364 aaPredicted RBP29.98■■■□□ 2.39
CLK2-203ENST00000368361 KCNB2Q92953 911 aa29.98■■■□□ 2.39
CLK2-203ENST00000368361 CASTP20810 708 aaKnown RBP29.97■■■□□ 2.39
CLK2-203ENST00000368361 ADCK5Q3MIX3 580 aa29.97■■■□□ 2.39
CLK2-203ENST00000368361 A0A1B0GUL7 405 aa29.97■■■□□ 2.39
CLK2-203ENST00000368361 ERVV-1B6SEH8 477 aa29.97■■■□□ 2.39
CLK2-203ENST00000368361 ATP6V1AP38606 617 aa29.97■■■□□ 2.39
CLK2-203ENST00000368361 DDX46Q7L014 1031 aaKnown RBP29.97■■■□□ 2.39
CLK2-203ENST00000368361 CPA1P15085 419 aa29.96■■■□□ 2.39
CLK2-203ENST00000368361 INTS4Q96HW7 963 aaKnown RBP29.96■■■□□ 2.39
CLK2-203ENST00000368361 BAG4O95429 457 aaKnown RBP29.96■■■□□ 2.39
CLK2-203ENST00000368361 KCNJ4P48050 445 aa29.96■■■□□ 2.39
CLK2-203ENST00000368361 IFIT5Q13325 482 aaKnown RBP29.96■■■□□ 2.39
CLK2-203ENST00000368361 INTS5Q6P9B9 1019 aaKnown RBP29.96■■■□□ 2.39
CLK2-203ENST00000368361 RFX7Q2KHR2 1363 aa29.95■■■□□ 2.39
CLK2-203ENST00000368361 LOC102724428A0A0B4J2F2 783 aa29.95■■■□□ 2.38
CLK2-203ENST00000368361 CHGBP05060 677 aa29.95■■■□□ 2.38
CLK2-203ENST00000368361 AK2P54819 239 aa29.95■■■□□ 2.38
CLK2-203ENST00000368361 SIK1P57059 783 aa29.95■■■□□ 2.38
CLK2-203ENST00000368361 CREB3L3Q68CJ9 461 aa29.95■■■□□ 2.38
CLK2-203ENST00000368361 CEP126Q9P2H0 1117 aa29.95■■■□□ 2.38
CLK2-203ENST00000368361 ZDHHC9Q9Y397 364 aa29.95■■■□□ 2.38
CLK2-203ENST00000368361 UBAP1LF5GYI3 381 aa29.94■■■□□ 2.38
CLK2-203ENST00000368361 EIF5P55010 431 aaKnown RBP29.94■■■□□ 2.38
CLK2-203ENST00000368361 JAKMIP1Q96N16 626 aaKnown RBP29.94■■■□□ 2.38
CLK2-203ENST00000368361 TRMT112Q9UI30 125 aaKnown RBP29.94■■■□□ 2.38
CLK2-203ENST00000368361 FBXO3Q9UK99 471 aa29.94■■■□□ 2.38
CLK2-203ENST00000368361 TAF7LQ5H9L4 462 aa29.94■■■□□ 2.38
CLK2-203ENST00000368361 UBN2Q6ZU65 1347 aa29.94■■■□□ 2.38
CLK2-203ENST00000368361 ZKSCAN1P17029 563 aaPredicted RBP29.93■■■□□ 2.38
CLK2-203ENST00000368361 CRKLP46109 303 aaKnown RBP29.93■■■□□ 2.38
CLK2-203ENST00000368361 TTLL11Q8NHH1 800 aa29.93■■■□□ 2.38
CLK2-203ENST00000368361 GZF1Q9H116 711 aaPredicted RBP29.93■■■□□ 2.38
CLK2-203ENST00000368361 CCDC87Q9NVE4 849 aa29.93■■■□□ 2.38
CLK2-203ENST00000368361 JCADQ9P266 1359 aa29.93■■■□□ 2.38
CLK2-203ENST00000368361 IRS4O14654 1257 aaPredicted RBP29.92■■■□□ 2.38
CLK2-203ENST00000368361 KBTBD3Q8NAB2 608 aa29.92■■■□□ 2.38
CLK2-203ENST00000368361 GREM2Q9H772 168 aa29.92■■■□□ 2.38
CLK2-203ENST00000368361 MYH3P11055 1940 aa29.92■■■□□ 2.38
CLK2-203ENST00000368361 SLC27A2O14975 620 aa29.91■■■□□ 2.38
CLK2-203ENST00000368361 CTSWP56202 376 aa29.91■■■□□ 2.38
CLK2-203ENST00000368361 ITPK1Q13572 414 aa29.91■■■□□ 2.38
CLK2-203ENST00000368361 FAM98CQ17RN3 349 aaKnown RBP29.91■■■□□ 2.38
CLK2-203ENST00000368361 C8orf37Q96NL8 207 aa29.91■■■□□ 2.38
CLK2-203ENST00000368361 TM6SF1Q9BZW5 370 aa29.91■■■□□ 2.38
CLK2-203ENST00000368361 ZSWIM6Q9HCJ5 1215 aa29.91■■■□□ 2.38
CLK2-203ENST00000368361 PAG1Q9NWQ8 432 aa29.91■■■□□ 2.38
CLK2-203ENST00000368361 GOLIM4O00461 696 aa29.91■■■□□ 2.38
CLK2-203ENST00000368361 KCNQ2O43526 872 aa29.91■■■□□ 2.38
CLK2-203ENST00000368361 TAF5LO75529 589 aa29.91■■■□□ 2.38
CLK2-203ENST00000368361 RUFY3Q7L099 469 aa29.91■■■□□ 2.38
CLK2-203ENST00000368361 ZNF34Q8IZ26 560 aa29.91■■■□□ 2.38
CLK2-203ENST00000368361 LARP6Q9BRS8 491 aaKnown RBP29.91■■■□□ 2.38
CLK2-203ENST00000368361 PALLDQ8WX93 1383 aa29.91■■■□□ 2.38
CLK2-203ENST00000368361 ITGA6P23229 1130 aa29.9■■■□□ 2.38
CLK2-203ENST00000368361 SEC62Q99442 399 aaKnown RBP29.9■■■□□ 2.38
CLK2-203ENST00000368361 LIMCH1Q9UPQ0 1083 aa29.89■■■□□ 2.38
CLK2-203ENST00000368361 GOLGA6L22H0YM25 854 aa29.88■■■□□ 2.37
CLK2-203ENST00000368361 IFIT1P09914 478 aaKnown RBP29.88■■■□□ 2.37
CLK2-203ENST00000368361 PTMSP20962 102 aa29.88■■■□□ 2.37
CLK2-203ENST00000368361 AKAP2Q9Y2D5 859 aa29.88■■■□□ 2.37
CLK2-203ENST00000368361 CYP46A1Q9Y6A2 500 aa29.88■■■□□ 2.37
CLK2-203ENST00000368361 BCL9LQ86UU0 1499 aa29.88■■■□□ 2.37
CLK2-203ENST00000368361 VPS53Q5VIR6 699 aa29.88■■■□□ 2.37
CLK2-203ENST00000368361 CCDC129Q6ZRS4 1044 aa29.88■■■□□ 2.37
CLK2-203ENST00000368361 NGLY1Q96IV0 654 aa29.88■■■□□ 2.37
CLK2-203ENST00000368361 PDRG1Q9NUG6 133 aa29.88■■■□□ 2.37
CLK2-203ENST00000368361 MYH14Q7Z406 1995 aaKnown RBP29.88■■■□□ 2.37
CLK2-203ENST00000368361 RREB1Q92766 1687 aa29.87■■■□□ 2.37
CLK2-203ENST00000368361 RPAP1Q9BWH6 1393 aaPredicted RBP29.87■■■□□ 2.37
CLK2-203ENST00000368361 ADORA1P30542 326 aa29.87■■■□□ 2.37
CLK2-203ENST00000368361 MCMDC2Q4G0Z9 681 aa29.87■■■□□ 2.37
CLK2-203ENST00000368361 RNF20Q5VTR2 975 aa29.87■■■□□ 2.37
CLK2-203ENST00000368361 CICQ96RK0 1608 aaPredicted RBP29.86■■■□□ 2.37
CLK2-203ENST00000368361 PDE8AO60658 829 aa29.86■■■□□ 2.37
CLK2-203ENST00000368361 XAGE2Q96GT9 111 aa29.86■■■□□ 2.37
CLK2-203ENST00000368361 RIC1Q4ADV7 1423 aa29.86■■■□□ 2.37
CLK2-203ENST00000368361 MCTP1Q6DN14 999 aa29.86■■■□□ 2.37
CLK2-203ENST00000368361 LDHAL6AQ6ZMR3 332 aa29.86■■■□□ 2.37
CLK2-203ENST00000368361 RIPOR2Q9Y4F9 1068 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms