RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 TPTE2Q6XPS3 522 aa19.67■□□□□ 0.74
LMNA-203ENST00000368297 KLHDC4Q8TBB5 520 aa19.67■□□□□ 0.74
LMNA-203ENST00000368297 LRRCC1Q9C099 1032 aa19.67■□□□□ 0.74
LMNA-203ENST00000368297 NOP58Q9Y2X3 529 aaKnown RBP19.67■□□□□ 0.74
LMNA-203ENST00000368297 CSF1RP07333 972 aa19.66■□□□□ 0.74
LMNA-203ENST00000368297 RFX5P48382 616 aaPredicted RBP19.66■□□□□ 0.74
LMNA-203ENST00000368297 CCDC57Q2TAC2 916 aa19.66■□□□□ 0.74
LMNA-203ENST00000368297 SIL1Q9H173 461 aa19.66■□□□□ 0.74
LMNA-203ENST00000368297 QSER1Q2KHR3 1735 aa19.66■□□□□ 0.74
LMNA-203ENST00000368297 FAM161AQ3B820 660 aa19.65■□□□□ 0.74
LMNA-203ENST00000368297 TTLL11Q8NHH1 800 aa19.65■□□□□ 0.74
LMNA-203ENST00000368297 COPRSQ9NQ92 184 aa19.65■□□□□ 0.74
LMNA-203ENST00000368297 PTPN12Q05209 780 aaKnown RBP19.65■□□□□ 0.74
LMNA-203ENST00000368297 TAF7LQ5H9L4 462 aa19.65■□□□□ 0.74
LMNA-203ENST00000368297 ERC1Q8IUD2 1116 aa19.65■□□□□ 0.74
LMNA-203ENST00000368297 NLGN1Q8N2Q7 840 aa19.65■□□□□ 0.74
LMNA-203ENST00000368297 PDE4AP27815 886 aa19.64■□□□□ 0.73
LMNA-203ENST00000368297 IFIT5Q13325 482 aaKnown RBP19.64■□□□□ 0.73
LMNA-203ENST00000368297 KIF1BPQ96EK5 621 aa19.64■□□□□ 0.73
LMNA-203ENST00000368297 ANKRD18BA2A2Z9 1011 aa19.63■□□□□ 0.73
LMNA-203ENST00000368297 TM4SF1P30408 202 aa19.63■□□□□ 0.73
LMNA-203ENST00000368297 CNBD1Q8NA66 436 aa19.63■□□□□ 0.73
LMNA-203ENST00000368297 RHPN1Q8TCX5 695 aa19.63■□□□□ 0.73
LMNA-203ENST00000368297 GREM2Q9H772 168 aa19.63■□□□□ 0.73
LMNA-203ENST00000368297 ABCC12Q96J65 1359 aa19.63■□□□□ 0.73
LMNA-203ENST00000368297 SERPINB2P05120 415 aa19.62■□□□□ 0.73
LMNA-203ENST00000368297 CCDC152Q4G0S7 254 aa19.62■□□□□ 0.73
LMNA-203ENST00000368297 SLC10A5Q5PT55 438 aa19.62■□□□□ 0.73
LMNA-203ENST00000368297 CCDC24Q8N4L8 307 aa19.62■□□□□ 0.73
LMNA-203ENST00000368297 UPF1Q92900 1129 aaKnown RBP eCLIP19.62■□□□□ 0.73
LMNA-203ENST00000368297 ZNF594Q96JF6 807 aaPredicted RBP19.62■□□□□ 0.73
LMNA-203ENST00000368297 ITGA6P23229 1130 aa19.62■□□□□ 0.73
LMNA-203ENST00000368297 IL1RAPL2Q9NP60 686 aa19.62■□□□□ 0.73
LMNA-203ENST00000368297 DDR1Q08345 913 aa19.61■□□□□ 0.73
LMNA-203ENST00000368297 MSL1Q68DK7 614 aa19.61■□□□□ 0.73
LMNA-203ENST00000368297 CASZ1Q86V15 1759 aa19.61■□□□□ 0.73
LMNA-203ENST00000368297 ST5P78524 1137 aa19.6■□□□□ 0.73
LMNA-203ENST00000368297 C16orf71Q8IYS4 520 aaPredicted RBP19.6■□□□□ 0.73
LMNA-203ENST00000368297 NLRP3Q96P20 1036 aa19.6■□□□□ 0.73
LMNA-203ENST00000368297 BACH2Q9BYV9 841 aa19.6■□□□□ 0.73
LMNA-203ENST00000368297 POLRMTO00411 1230 aaKnown RBP19.59■□□□□ 0.73
LMNA-203ENST00000368297 PRR5LQ6MZQ0 368 aa19.59■□□□□ 0.73
LMNA-203ENST00000368297 EYA2O00167 538 aa19.59■□□□□ 0.73
LMNA-203ENST00000368297 SASH1O94885 1247 aa19.58■□□□□ 0.72
LMNA-203ENST00000368297 SF3B3Q15393 1217 aaKnown RBP19.58■□□□□ 0.72
LMNA-203ENST00000368297 C3orf67Q6ZVT6 689 aa19.58■□□□□ 0.72
LMNA-203ENST00000368297 CLASRPQ8N2M8 674 aaKnown RBP19.58■□□□□ 0.72
LMNA-203ENST00000368297 PARP3Q9Y6F1 533 aa19.58■□□□□ 0.72
LMNA-203ENST00000368297 RTL9Q8NET4 1388 aa19.57■□□□□ 0.72
LMNA-203ENST00000368297 CIAO1O76071 339 aa19.57■□□□□ 0.72
LMNA-203ENST00000368297 MMP10P09238 476 aa19.57■□□□□ 0.72
LMNA-203ENST00000368297 IL15P40933 162 aaPredicted RBP19.57■□□□□ 0.72
LMNA-203ENST00000368297 LRRC24Q50LG9 513 aa19.57■□□□□ 0.72
LMNA-203ENST00000368297 OTUD7AQ8TE49 926 aaPredicted RBP19.57■□□□□ 0.72
LMNA-203ENST00000368297 SEC31BQ9NQW1 1179 aa19.57■□□□□ 0.72
LMNA-203ENST00000368297 TNRC6CQ9HCJ0 1690 aaKnown RBP19.57■□□□□ 0.72
LMNA-203ENST00000368297 LDHAL6AQ6ZMR3 332 aa19.56■□□□□ 0.72
LMNA-203ENST00000368297 PUS3Q9BZE2 481 aaKnown RBP19.56■□□□□ 0.72
LMNA-203ENST00000368297 CNNM1Q9NRU3 951 aa19.56■□□□□ 0.72
LMNA-203ENST00000368297 FBXO3Q9UK99 471 aa19.56■□□□□ 0.72
LMNA-203ENST00000368297 TFCP2Q12800 502 aa19.56■□□□□ 0.72
LMNA-203ENST00000368297 ATG9AQ7Z3C6 839 aa19.56■□□□□ 0.72
LMNA-203ENST00000368297 PLEKHM2Q8IWE5 1019 aa19.56■□□□□ 0.72
LMNA-203ENST00000368297 SPEF2Q9C093 1822 aa19.55■□□□□ 0.72
LMNA-203ENST00000368297 CDC5LQ99459 802 aaKnown RBP19.55■□□□□ 0.72
LMNA-203ENST00000368297 RIC1Q4ADV7 1423 aa19.55■□□□□ 0.72
LMNA-203ENST00000368297 IFIT2P09913 472 aaKnown RBP19.54■□□□□ 0.72
LMNA-203ENST00000368297 IGHMBP2P38935 993 aaKnown RBP19.54■□□□□ 0.72
LMNA-203ENST00000368297 AACSQ86V21 672 aa19.54■□□□□ 0.72
LMNA-203ENST00000368297 MPHOSPH8Q99549 860 aa19.54■□□□□ 0.72
LMNA-203ENST00000368297 PDGFDQ9GZP0 370 aaPredicted RBP19.53■□□□□ 0.72
LMNA-203ENST00000368297 CEP126Q9P2H0 1117 aa19.53■□□□□ 0.72
LMNA-203ENST00000368297 NRXN2Q9P2S2 1712 aa19.53■□□□□ 0.72
LMNA-203ENST00000368297 MX1P20591 662 aa19.52■□□□□ 0.72
LMNA-203ENST00000368297 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.52■□□□□ 0.72
LMNA-203ENST00000368297 LRP5O75197 1615 aa19.52■□□□□ 0.72
LMNA-203ENST00000368297 METTL24Q5JXM2 366 aa19.52■□□□□ 0.71
LMNA-203ENST00000368297 DDX46Q7L014 1031 aaKnown RBP19.52■□□□□ 0.71
LMNA-203ENST00000368297 ANKRD18AQ8IVF6 992 aa19.52■□□□□ 0.71
LMNA-203ENST00000368297 ANP32AP39687 249 aaKnown RBP19.51■□□□□ 0.71
LMNA-203ENST00000368297 PDE1AP54750 535 aa19.51■□□□□ 0.71
LMNA-203ENST00000368297 TNNI3KQ59H18 835 aa19.51■□□□□ 0.71
LMNA-203ENST00000368297 SLC16A10Q8TF71 515 aa19.51■□□□□ 0.71
LMNA-203ENST00000368297 EAF2Q96CJ1 260 aaPredicted RBP19.51■□□□□ 0.71
LMNA-203ENST00000368297 RIPOR2Q9Y4F9 1068 aa19.51■□□□□ 0.71
LMNA-203ENST00000368297 FPGT-TNNI3KV9GXZ4 949 aa19.51■□□□□ 0.71
LMNA-203ENST00000368297 SALL3Q9BXA9 1300 aa19.51■□□□□ 0.71
LMNA-203ENST00000368297 RPGRQ92834 1020 aaKnown RBP19.5■□□□□ 0.71
LMNA-203ENST00000368297 CCDC8Q9H0W5 538 aaPredicted RBP19.5■□□□□ 0.71
LMNA-203ENST00000368297 TAF1P21675 1872 aa19.5■□□□□ 0.71
LMNA-203ENST00000368297 GPATCH3Q96I76 525 aa19.49■□□□□ 0.71
LMNA-203ENST00000368297 TSHZ3Q63HK5 1081 aa19.49■□□□□ 0.71
LMNA-203ENST00000368297 CELF1Q92879 486 aaKnown RBP19.49■□□□□ 0.71
LMNA-203ENST00000368297 BRIP1Q9BX63 1249 aa19.49■□□□□ 0.71
LMNA-203ENST00000368297 GPR108Q9NPR9 543 aa19.49■□□□□ 0.71
LMNA-203ENST00000368297 MROH5Q6ZUA9 1318 aa19.48■□□□□ 0.71
LMNA-203ENST00000368297 ANKRD31Q8N7Z5 1873 aa19.48■□□□□ 0.71
LMNA-203ENST00000368297 COL4A1P02462 1669 aa19.48■□□□□ 0.71
LMNA-203ENST00000368297 R3HDM1Q15032 1099 aaKnown RBP19.48■□□□□ 0.71
LMNA-203ENST00000368297 TTC22Q5TAA0 569 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms