RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 LGR6Q9HBX8 967 aa13.57□□□□□ -0.24
COPA-202ENST00000368069 NEO1Q92859 1461 aa13.57□□□□□ -0.24
COPA-202ENST00000368069 ZFYVE16Q7Z3T8 1539 aa13.57□□□□□ -0.24
COPA-202ENST00000368069 TMEM67Q5HYA8 995 aa13.57□□□□□ -0.24
COPA-202ENST00000368069 ARHGEF10O15013 1369 aa13.57□□□□□ -0.24
COPA-202ENST00000368069 ZSCAN12O43309 604 aa13.56□□□□□ -0.24
COPA-202ENST00000368069 PAG1Q9NWQ8 432 aa13.56□□□□□ -0.24
COPA-202ENST00000368069 YEATS2Q9ULM3 1422 aa13.56□□□□□ -0.24
COPA-202ENST00000368069 ZCCHC11Q5TAX3 1644 aaKnown RBP13.56□□□□□ -0.24
COPA-202ENST00000368069 NUTM2BA6NNL0 878 aaPredicted RBP13.56□□□□□ -0.24
COPA-202ENST00000368069 NUTM2EB1AL46 878 aaPredicted RBP13.56□□□□□ -0.24
COPA-202ENST00000368069 IL15P40933 162 aaPredicted RBP13.56□□□□□ -0.24
COPA-202ENST00000368069 IKQ13123 557 aaPredicted RBP13.56□□□□□ -0.24
COPA-202ENST00000368069 TTF1Q15361 905 aaPredicted RBP13.56□□□□□ -0.24
COPA-202ENST00000368069 NUTM2AQ8IVF1 878 aaPredicted RBP13.56□□□□□ -0.24
COPA-202ENST00000368069 DDX21Q9NR30 783 aaKnown RBP eCLIP13.56□□□□□ -0.24
COPA-202ENST00000368069 CLASP1Q7Z460 1538 aa13.56□□□□□ -0.24
COPA-202ENST00000368069 NPHP3Q7Z494 1330 aa13.56□□□□□ -0.24
COPA-202ENST00000368069 PLEKHG3A1L390 1219 aa13.56□□□□□ -0.24
COPA-202ENST00000368069 URI1O94763 535 aaPredicted RBP13.56□□□□□ -0.24
COPA-202ENST00000368069 SOGA3Q5TF21 947 aa13.56□□□□□ -0.24
COPA-202ENST00000368069 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.56□□□□□ -0.243e-7■■■■□ 22.6
COPA-202ENST00000368069 UNC13BO14795 1591 aa13.56□□□□□ -0.24
COPA-202ENST00000368069 EPB41L2O43491 1005 aaKnown RBP13.55□□□□□ -0.24
COPA-202ENST00000368069 TET3O43151 1660 aa13.55□□□□□ -0.24
COPA-202ENST00000368069 PRKCSHP14314 528 aaPredicted RBP13.55□□□□□ -0.24
COPA-202ENST00000368069 ARHGAP29Q52LW3 1261 aa13.55□□□□□ -0.24
COPA-202ENST00000368069 CLTCL1P53675 1640 aa13.55□□□□□ -0.24
COPA-202ENST00000368069 MEX3CQ5U5Q3 659 aaKnown RBP13.55□□□□□ -0.24
COPA-202ENST00000368069 ANTXR1Q9H6X2 564 aa13.55□□□□□ -0.24
COPA-202ENST00000368069 RANBP6O60518 1105 aaKnown RBP13.55□□□□□ -0.24
COPA-202ENST00000368069 HOXB7P09629 217 aa13.55□□□□□ -0.24
COPA-202ENST00000368069 MRPS27Q92552 414 aaKnown RBP13.55□□□□□ -0.24
COPA-202ENST00000368069 ZFYP08048 801 aaPredicted RBP13.54□□□□□ -0.24
COPA-202ENST00000368069 ATP2B2Q01814 1243 aa13.54□□□□□ -0.24
COPA-202ENST00000368069 FAM135BQ49AJ0 1406 aa13.54□□□□□ -0.24
COPA-202ENST00000368069 DTNBO60941 627 aa13.54□□□□□ -0.24
COPA-202ENST00000368069 APOBRQ0VD83 1088 aa13.54□□□□□ -0.24
COPA-202ENST00000368069 PPP4R3BQ5MIZ7 849 aa13.54□□□□□ -0.24
COPA-202ENST00000368069 CHST3Q7LGC8 479 aa13.54□□□□□ -0.24
COPA-202ENST00000368069 RNF41Q9H4P4 317 aaPredicted RBP13.54□□□□□ -0.24
COPA-202ENST00000368069 ERLIN1O75477 346 aa13.54□□□□□ -0.24
COPA-202ENST00000368069 KRT18P05783 430 aaKnown RBP13.54□□□□□ -0.24
COPA-202ENST00000368069 KLHDC4Q8TBB5 520 aa13.54□□□□□ -0.24
COPA-202ENST00000368069 CCDC43Q96MW1 224 aaKnown RBP13.54□□□□□ -0.24
COPA-202ENST00000368069 SLC26A6Q9BXS9 759 aa13.54□□□□□ -0.24
COPA-202ENST00000368069 TEX13AQ9BXU3 409 aaPredicted RBP13.54□□□□□ -0.24
COPA-202ENST00000368069 CWC15Q9P013 229 aaKnown RBP13.54□□□□□ -0.24
COPA-202ENST00000368069 SETQ01105 290 aaPredicted RBP13.54□□□□□ -0.24
COPA-202ENST00000368069 ATP2B3Q16720 1220 aa13.54□□□□□ -0.24
COPA-202ENST00000368069 CAVIN4Q5BKX8 364 aa13.54□□□□□ -0.24
COPA-202ENST00000368069 TMCO3Q6UWJ1 677 aa13.54□□□□□ -0.24
COPA-202ENST00000368069 CGNQ9P2M7 1197 aaKnown RBP13.54□□□□□ -0.24
COPA-202ENST00000368069 GADD45BO75293 160 aaPredicted RBP13.53□□□□□ -0.24
COPA-202ENST00000368069 HSPA4P34932 840 aa13.53□□□□□ -0.24
COPA-202ENST00000368069 PKP1Q13835 747 aa13.53□□□□□ -0.24
COPA-202ENST00000368069 CEP135Q66GS9 1140 aa13.53□□□□□ -0.24
COPA-202ENST00000368069 ZCRB1Q8TBF4 217 aaKnown RBP13.53□□□□□ -0.24
COPA-202ENST00000368069 FAM227BQ96M60 508 aa13.53□□□□□ -0.24
COPA-202ENST00000368069 DEF6Q9H4E7 631 aa13.53□□□□□ -0.24
COPA-202ENST00000368069 CTCFLQ8NI51 663 aaPredicted RBP13.53□□□□□ -0.24
COPA-202ENST00000368069 CTDP1Q9Y5B0 961 aaPredicted RBP13.53□□□□□ -0.24
COPA-202ENST00000368069 SLC27A2O14975 620 aa13.53□□□□□ -0.24
COPA-202ENST00000368069 CD2BP2O95400 341 aaKnown RBP13.53□□□□□ -0.24
COPA-202ENST00000368069 BRD1O95696 1058 aa13.53□□□□□ -0.24
COPA-202ENST00000368069 KCNG4Q8TDN1 519 aa13.53□□□□□ -0.24
COPA-202ENST00000368069 CABLES1Q8TDN4 633 aa13.53□□□□□ -0.24
COPA-202ENST00000368069 USP44Q9H0E7 712 aa13.53□□□□□ -0.24
COPA-202ENST00000368069 TMEM63CQ9P1W3 806 aa13.53□□□□□ -0.24
COPA-202ENST00000368069 PTPDC1A2A3K4 754 aa13.52□□□□□ -0.24
COPA-202ENST00000368069 SNW1Q13573 536 aaKnown RBP13.52□□□□□ -0.24
COPA-202ENST00000368069 IQCA1Q86XH1 822 aa13.52□□□□□ -0.24
COPA-202ENST00000368069 PALD1Q9ULE6 856 aa13.52□□□□□ -0.24
COPA-202ENST00000368069 MAP3K4Q9Y6R4 1608 aa13.52□□□□□ -0.24
COPA-202ENST00000368069 AATKQ6ZMQ8 1374 aa13.52□□□□□ -0.24
COPA-202ENST00000368069 SYKP43405 635 aa13.52□□□□□ -0.24
COPA-202ENST00000368069 AOPEPQ8N6M6 819 aa13.52□□□□□ -0.24
COPA-202ENST00000368069 ALG1Q9BT22 464 aa13.52□□□□□ -0.24
COPA-202ENST00000368069 TANGO6Q9C0B7 1094 aa13.52□□□□□ -0.24
COPA-202ENST00000368069 ZNF652Q9Y2D9 606 aa13.52□□□□□ -0.24
COPA-202ENST00000368069 PRC1O43663 620 aa13.52□□□□□ -0.25
COPA-202ENST00000368069 SKILP12757 684 aa13.52□□□□□ -0.25
COPA-202ENST00000368069 PTGS1P23219 599 aa13.52□□□□□ -0.25
COPA-202ENST00000368069 RPS6KB1P23443 525 aa13.52□□□□□ -0.25
COPA-202ENST00000368069 CCDC102BQ68D86 513 aa13.52□□□□□ -0.25
COPA-202ENST00000368069 DHX32Q7L7V1 743 aaKnown RBP13.52□□□□□ -0.25
COPA-202ENST00000368069 LUZP1Q86V48 1076 aa13.52□□□□□ -0.25
COPA-202ENST00000368069 EIF5P55010 431 aaKnown RBP13.52□□□□□ -0.25
COPA-202ENST00000368069 FAM173BQ6P4H8 233 aa13.52□□□□□ -0.25
COPA-202ENST00000368069 MFSD6Q6ZSS7 791 aa13.52□□□□□ -0.25
COPA-202ENST00000368069 CADPS2Q86UW7 1296 aa13.52□□□□□ -0.25
COPA-202ENST00000368069 CHD1O14646 1710 aa13.52□□□□□ -0.25
COPA-202ENST00000368069 RNF113AO15541 343 aaKnown RBP13.51□□□□□ -0.25
COPA-202ENST00000368069 CCDC129Q6ZRS4 1044 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 SUCLG2Q96I99 432 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 TMEM2Q9UHN6 1383 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 EIF4A1P60842 406 aaKnown RBP13.51□□□□□ -0.25
COPA-202ENST00000368069 NBPF6Q5VWK0 638 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 LEKR1Q6ZMV7 388 aa13.51□□□□□ -0.25
COPA-202ENST00000368069 CCDC150Q8NCX0 1101 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms