RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 NLRP13Q86W25 1043 aa6.06□□□□□ -1.44
RNU6-28P-201ENST00000362378 C8orf37Q96NL8 207 aa6.06□□□□□ -1.44
RNU6-28P-201ENST00000362378 CHRDQ9H2X0 955 aa6.06□□□□□ -1.44
RNU6-28P-201ENST00000362378 METTL5Q9NRN9 209 aaKnown RBP6.06□□□□□ -1.44
RNU6-28P-201ENST00000362378 KCNH4Q9UQ05 1017 aa6.06□□□□□ -1.44
RNU6-28P-201ENST00000362378 IGSF3O75054 1194 aa6.05□□□□□ -1.44
RNU6-28P-201ENST00000362378 HDLBPQ00341 1268 aaKnown RBP6.05□□□□□ -1.44
RNU6-28P-201ENST00000362378 INSM1Q01101 510 aaPredicted RBP6.05□□□□□ -1.44
RNU6-28P-201ENST00000362378 LAMC2Q13753 1193 aa6.05□□□□□ -1.44
RNU6-28P-201ENST00000362378 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.05□□□□□ -1.44
RNU6-28P-201ENST00000362378 TMEM87AQ8NBN3 555 aa6.05□□□□□ -1.44
RNU6-28P-201ENST00000362378 PMEPA1Q969W9 287 aa6.05□□□□□ -1.44
RNU6-28P-201ENST00000362378 ABI2Q9NYB9 513 aaPredicted RBP6.05□□□□□ -1.44
RNU6-28P-201ENST00000362378 CNTN3Q9P232 1028 aa6.05□□□□□ -1.44
RNU6-28P-201ENST00000362378 PCDHGC4Q9Y5F7 938 aa6.05□□□□□ -1.44
RNU6-28P-201ENST00000362378 H7C1W4 665 aa6.04□□□□□ -1.44
RNU6-28P-201ENST00000362378 ATXN7O15265 892 aaPredicted RBP6.04□□□□□ -1.44
RNU6-28P-201ENST00000362378 EIF4BP23588 611 aaKnown RBP6.04□□□□□ -1.44
RNU6-28P-201ENST00000362378 PTSQ03393 145 aa6.04□□□□□ -1.44
RNU6-28P-201ENST00000362378 TNP2Q05952 138 aa6.04□□□□□ -1.44
RNU6-28P-201ENST00000362378 METTL16Q86W50 562 aaKnown RBP6.04□□□□□ -1.44
RNU6-28P-201ENST00000362378 GALNT12Q8IXK2 581 aa6.04□□□□□ -1.44
RNU6-28P-201ENST00000362378 C1orf127Q8N9H9 656 aa6.04□□□□□ -1.44
RNU6-28P-201ENST00000362378 CRELD1Q96HD1 420 aa6.04□□□□□ -1.44
RNU6-28P-201ENST00000362378 GSX2Q9BZM3 304 aa6.04□□□□□ -1.44
RNU6-28P-201ENST00000362378 ST8SIA5O15466 376 aa6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 CTSHP09668 335 aa6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 IRS1P35568 1242 aa6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 VEGFBP49765 207 aa6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 FANCCQ00597 558 aa6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 SFSWAPQ12872 951 aaKnown RBP6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 CCINQ13939 588 aa6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 TTC39BQ5VTQ0 682 aaPredicted RBP6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 EPS8L3Q8TE67 593 aaKnown RBP6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 GMCL1Q96IK5 515 aa6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 OSBPL7Q9BZF2 842 aa6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 NUCKS1Q9H1E3 243 aaKnown RBP6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 C12orf49Q9H741 205 aa6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 NDFIP2Q9NV92 336 aa6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 NLRP2Q9NX02 1062 aa6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 DACH1Q9UI36 760 aa6.03□□□□□ -1.44
RNU6-28P-201ENST00000362378 SOBPA7XYQ1 873 aa6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 EREGO14944 169 aa6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 ZC3H6P61129 1189 aaKnown RBP6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 RAD51AP2Q09MP3 1159 aa6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 DBN1Q16643 649 aa6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 PI16Q6UXB8 463 aa6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 RIPOR1Q6ZS17 1223 aa6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 TRIM22Q8IYM9 498 aa6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 CCDC155Q8N6L0 562 aa6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 RNF34Q969K3 372 aa6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 KIFC2Q96AC6 838 aa6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 SRCIN1Q9C0H9 1055 aa6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 EFCC1Q9HA90 598 aa6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 SENP2Q9HC62 589 aa6.02□□□□□ -1.45
RNU6-28P-201ENST00000362378 KHNYNO15037 678 aaKnown RBP6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 SASH3O75995 380 aa6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 POLR3DP05423 398 aaPredicted RBP6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 MAPTP10636 758 aaKnown RBP6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 CES1P23141 567 aa6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 ERCC5P28715 1186 aaPredicted RBP6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 ZNF76P36508 570 aa6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 KIAA0319Q5VV43 1072 aa6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 OR13H1Q8NG92 308 aa6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 SUV39H2Q9H5I1 410 aa6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 NPHS2Q9NP85 383 aa6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 STRN4Q9NRL3 753 aa6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 CUEDC1Q9NWM3 386 aaPredicted RBP6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 FAM8A1Q9UBU6 413 aa6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 HCN2Q9UL51 889 aa6.01□□□□□ -1.45
RNU6-28P-201ENST00000362378 DCDC2BA2VCK2 349 aa6□□□□□ -1.45
RNU6-28P-201ENST00000362378 POTECB2RU33 542 aa6□□□□□ -1.45
RNU6-28P-201ENST00000362378 BNIP3LO60238 219 aa6□□□□□ -1.45
RNU6-28P-201ENST00000362378 MMP20O60882 483 aa6□□□□□ -1.45
RNU6-28P-201ENST00000362378 MAP3K6O95382 1288 aa6□□□□□ -1.45
RNU6-28P-201ENST00000362378 HOXD8P13378 290 aaPredicted RBP6□□□□□ -1.45
RNU6-28P-201ENST00000362378 TARSP26639 723 aaKnown RBP6□□□□□ -1.45
RNU6-28P-201ENST00000362378 C9orf131Q5VYM1 1079 aa6□□□□□ -1.45
RNU6-28P-201ENST00000362378 NT5DC4Q86YG4 428 aa6□□□□□ -1.45
RNU6-28P-201ENST00000362378 TRIM47Q96LD4 638 aa6□□□□□ -1.45
RNU6-28P-201ENST00000362378 MARK1Q9P0L2 795 aa6□□□□□ -1.45
RNU6-28P-201ENST00000362378 ZFATQ9P243 1243 aa6□□□□□ -1.45
RNU6-28P-201ENST00000362378 SALL4Q9UJQ4 1053 aa6□□□□□ -1.45
RNU6-28P-201ENST00000362378 USP31Q70CQ4 1352 aa6□□□□□ -1.45
RNU6-28P-201ENST00000362378 WIPF1O43516 503 aa5.99□□□□□ -1.45
RNU6-28P-201ENST00000362378 CYP2E1P05181 493 aaPredicted RBP5.99□□□□□ -1.45
RNU6-28P-201ENST00000362378 EDN3P14138 238 aa5.99□□□□□ -1.45
RNU6-28P-201ENST00000362378 SOX18P35713 384 aa5.99□□□□□ -1.45
RNU6-28P-201ENST00000362378 ST13P50502 369 aaKnown RBP5.99□□□□□ -1.45
RNU6-28P-201ENST00000362378 PTPN12Q05209 780 aaKnown RBP5.99□□□□□ -1.45
RNU6-28P-201ENST00000362378 GRM2Q14416 872 aa5.99□□□□□ -1.45
RNU6-28P-201ENST00000362378 ZNF837Q96EG3 531 aaPredicted RBP5.99□□□□□ -1.45
RNU6-28P-201ENST00000362378 BCO2Q9BYV7 579 aa5.99□□□□□ -1.45
RNU6-28P-201ENST00000362378 TGIF2Q9GZN2 237 aa5.99□□□□□ -1.45
RNU6-28P-201ENST00000362378 TLR7Q9NYK1 1049 aaKnown RBP5.99□□□□□ -1.45
RNU6-28P-201ENST00000362378 ATXN7L1Q9ULK2 861 aaPredicted RBP5.99□□□□□ -1.45
RNU6-28P-201ENST00000362378 A0A1W2PP55 124 aa5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 GADD45BO75293 160 aaPredicted RBP5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 KIF4AO95239 1232 aa5.98□□□□□ -1.45
RNU6-28P-201ENST00000362378 USP17L7P0C7H9 530 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms