RNA–Protein interactions for RNA: ENST00000361642.9

ZEB1-202, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZEB1, Length 5,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-202ENST00000361642 BRDTQ58F21 947 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-202ENST00000361642 CNTROBQ8N137 903 aa6.3□□□□□ -1.4
ZEB1-202ENST00000361642 CRACR2BQ8N4Y2 399 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-202ENST00000361642 GTF3C2Q8WUA4 911 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-202ENST00000361642 SH2D4AQ9H788 454 aa6.3□□□□□ -1.4
ZEB1-202ENST00000361642 FMNL1O95466 1100 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-202ENST00000361642 PLCG2P16885 1265 aa6.3□□□□□ -1.4
ZEB1-202ENST00000361642 GBA2Q9HCG7 927 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-202ENST00000361642 BSDC1Q9NW68 430 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-202ENST00000361642 PPP2R3BQ9Y5P8 575 aa6.3□□□□□ -1.4
ZEB1-202ENST00000361642 AKAP2Q9Y2D5 859 aa6.29□□□□□ -1.4
ZEB1-202ENST00000361642 HEG1Q9ULI3 1381 aa6.29□□□□□ -1.4
ZEB1-202ENST00000361642 USP42Q9H9J4 1324 aaKnown RBP6.29□□□□□ -1.4
ZEB1-202ENST00000361642 GPTP24298 496 aa6.29□□□□□ -1.4
ZEB1-202ENST00000361642 FKBP5Q13451 457 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-202ENST00000361642 AEBP1Q8IUX7 1158 aa6.29□□□□□ -1.4
ZEB1-202ENST00000361642 TRMT44Q8IYL2 757 aaKnown RBP6.29□□□□□ -1.4
ZEB1-202ENST00000361642 COA7Q96BR5 231 aa6.29□□□□□ -1.4
ZEB1-202ENST00000361642 ATG3Q9NT62 314 aa6.29□□□□□ -1.4
ZEB1-202ENST00000361642 RGPD3A6NKT7 1758 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-202ENST00000361642 RGPD4Q7Z3J3 1758 aa6.29□□□□□ -1.4
ZEB1-202ENST00000361642 PRPF40BQ6NWY9 871 aaKnown RBP6.29□□□□□ -1.4
ZEB1-202ENST00000361642 API5Q9BZZ5 524 aaKnown RBP6.29□□□□□ -1.4
ZEB1-202ENST00000361642 MCM10Q7L590 875 aa6.29□□□□□ -1.4
ZEB1-202ENST00000361642 BAG3O95817 575 aa6.29□□□□□ -1.4
ZEB1-202ENST00000361642 HELBQ8NG08 1087 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-202ENST00000361642 SALL2Q9Y467 1007 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-202ENST00000361642 MAP2P11137 1827 aaKnown RBP6.29□□□□□ -1.4
ZEB1-202ENST00000361642 FBLN1P23142 703 aa6.28□□□□□ -1.4
ZEB1-202ENST00000361642 CTU1Q7Z7A3 348 aaKnown RBP6.28□□□□□ -1.4
ZEB1-202ENST00000361642 RAET1EQ8TD07 263 aa6.28□□□□□ -1.4
ZEB1-202ENST00000361642 SMCR8Q8TEV9 937 aaPredicted RBP6.28□□□□□ -1.4
ZEB1-202ENST00000361642 ZBTB3Q9H5J0 574 aa6.28□□□□□ -1.4
ZEB1-202ENST00000361642 CYP27B1O15528 508 aa6.28□□□□□ -1.4
ZEB1-202ENST00000361642 CENPBP07199 599 aaPredicted RBP6.28□□□□□ -1.4
ZEB1-202ENST00000361642 G3BP1Q13283 466 aaKnown RBP eCLIP6.28□□□□□ -1.4
ZEB1-202ENST00000361642 DZIP1Q86YF9 867 aaKnown RBP6.28□□□□□ -1.4
ZEB1-202ENST00000361642 PCDH10Q9P2E7 1040 aa6.28□□□□□ -1.4
ZEB1-202ENST00000361642 HNRNPUQ00839 825 aaKnown RBP eCLIP6.28□□□□□ -1.4
ZEB1-202ENST00000361642 CCDC27Q2M243 656 aa6.28□□□□□ -1.4
ZEB1-202ENST00000361642 ASAP1Q9ULH1 1129 aa6.28□□□□□ -1.4
ZEB1-202ENST00000361642 PER1O15534 1290 aaPredicted RBP6.28□□□□□ -1.4
ZEB1-202ENST00000361642 ZNF827Q17R98 1081 aa6.28□□□□□ -1.4
ZEB1-202ENST00000361642 KDRP35968 1356 aa6.27□□□□□ -1.4
ZEB1-202ENST00000361642 APAF1O14727 1248 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 RIMBP2O15034 1052 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 GNRH1P01148 92 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 SP8Q8IXZ3 490 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 CAPNS2Q96L46 248 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 TRIM47Q96LD4 638 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 LEMD3Q9Y2U8 911 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 CCDC158Q5M9N0 1113 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 DPF3Q92784 378 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 XDHP47989 1333 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 COL18A1P39060 1754 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 KIF4BQ2VIQ3 1234 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 FEZ1Q99689 392 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 PKD1L3Q7Z443 1732 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 DOT1LQ8TEK3 1739 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 ZEB2O60315 1214 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 TWISTNBQ3B726 338 aaPredicted RBP6.27□□□□□ -1.41
ZEB1-202ENST00000361642 ZSCAN25Q6NSZ9 544 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 TMEM87AQ8NBN3 555 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 TBC1D2Q9BYX2 928 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 KIF16BQ96L93 1317 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 LRP5O75197 1615 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 GRAPQ13588 217 aa6.27□□□□□ -1.41
ZEB1-202ENST00000361642 GRAPLQ8TC17 118 aaPredicted RBP6.27□□□□□ -1.41
ZEB1-202ENST00000361642 PLIN1O60240 522 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 PDE8AO60658 829 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 WDR78Q5VTH9 848 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 DUSP27Q5VZP5 1158 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 SLC4A10Q6U841 1118 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 ADAMTS8Q9UP79 889 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 MAP3K15Q6ZN16 1313 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 USP17L3A6NCW0 530 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 USP17L4A6NCW7 530 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 USP17L8P0C7I0 530 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 TRAF1Q13077 416 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 SLC39A6Q13433 755 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 RGMBQ6NW40 437 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 USP17L1Q7RTZ2 530 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 LINC00116Q8NCU8 138 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 IRS4O14654 1257 aaPredicted RBP6.26□□□□□ -1.41
ZEB1-202ENST00000361642 NFIXQ14938 502 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 PSMD1Q99460 953 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 LTBP3Q9NS15 1303 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 VTI1AQ96AJ9 217 aa6.26□□□□□ -1.41
ZEB1-202ENST00000361642 WDR33Q9C0J8 1336 aaKnown RBP6.25□□□□□ -1.41
ZEB1-202ENST00000361642 CHRNA5P30532 468 aa6.25□□□□□ -1.41
ZEB1-202ENST00000361642 IRX3P78415 501 aaPredicted RBP6.25□□□□□ -1.41
ZEB1-202ENST00000361642 MAP3K9P80192 1104 aa6.25□□□□□ -1.41
ZEB1-202ENST00000361642 PLBD2Q8NHP8 589 aa6.25□□□□□ -1.41
ZEB1-202ENST00000361642 PARK7Q99497 189 aaKnown RBP6.25□□□□□ -1.41
ZEB1-202ENST00000361642 PNMA2Q9UL42 364 aa6.25□□□□□ -1.41
ZEB1-202ENST00000361642 CCT4P50991 539 aaKnown RBP6.25□□□□□ -1.41
ZEB1-202ENST00000361642 FCGRTP55899 365 aa6.25□□□□□ -1.41
ZEB1-202ENST00000361642 AGBL3Q8NEM8 1001 aa6.25□□□□□ -1.41
ZEB1-202ENST00000361642 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.25□□□□□ -1.41
ZEB1-202ENST00000361642 RNF216Q9NWF9 866 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms