RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 BICD1Q96G01 975 aa9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 GABPB2Q8TAK5 448 aaPredicted RBP9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 PDCD2Q16342 344 aaPredicted RBP9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 SMIM24O75264 130 aa9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 HDGFL1Q5TGJ6 251 aa9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 TRIM47Q96LD4 638 aa9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 RBBP5Q15291 538 aaKnown RBP9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 LUC7L3O95232 432 aaKnown RBP9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 INPP5BP32019 993 aa9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 NOB1Q9ULX3 412 aaKnown RBP9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 TBCAO75347 108 aaKnown RBP9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 COG7P83436 770 aa9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 PLEKHH2Q8IVE3 1493 aa9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 UBE2HP62256 183 aa9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 RAB11FIP3O75154 756 aa9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 GPR161Q8N6U8 529 aaKnown RBP9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 RILPL1Q5EBL4 403 aa9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 STX6O43752 255 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 TAOK1Q7L7X3 1001 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 HAUS8Q9BT25 410 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 TMCO4Q5TGY1 634 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 RNF10Q8N5U6 811 aaKnown RBP9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 MPHOSPH6Q99547 160 aaKnown RBP9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 CCDC82Q8N4S0 544 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 ZNF165P49910 485 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 FERMT3Q86UX7 667 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 CXorf38Q8TB03 319 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 PPP1R7Q15435 360 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 GCKP35557 465 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 CSRNP2Q9H175 543 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 CUL4BQ13620 913 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 TWISTNBQ3B726 338 aaPredicted RBP9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 CHMP2AO43633 222 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 TRIM4Q9C037 500 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 N4BP3O15049 544 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 SLC12A7Q9Y666 1083 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 ATP6V1E1P36543 226 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 THEGQ9P2T0 379 aa9.53□□□□□ -0.88
NCKAP1-202ENST00000361354 SLC4A8Q2Y0W8 1093 aa9.52□□□□□ -0.88
NCKAP1-202ENST00000361354 I3L4J1 428 aa9.52□□□□□ -0.88
NCKAP1-202ENST00000361354 TNNC1P63316 161 aa9.52□□□□□ -0.88
NCKAP1-202ENST00000361354 CATIPQ7Z7H3 387 aa9.52□□□□□ -0.88
NCKAP1-202ENST00000361354 IQCA1Q86XH1 822 aa9.52□□□□□ -0.88
NCKAP1-202ENST00000361354 KRBA2Q6ZNG9 492 aa9.52□□□□□ -0.88
NCKAP1-202ENST00000361354 ATP6V0A2Q9Y487 856 aa9.52□□□□□ -0.88
NCKAP1-202ENST00000361354 KRT83P78385 493 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 HDAC9Q9UKV0 1011 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 OGFRQ9NZT2 677 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 ZNF131P52739 623 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 TTF1Q15361 905 aaPredicted RBP9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 MORC4Q8TE76 937 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 Q9H521 79 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 UBASH3AP57075 661 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 ERMNQ8TAM6 284 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 NLRP2Q9NX02 1062 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 SSRP1Q08945 709 aaKnown RBP9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 SMAP1Q8IYB5 467 aaPredicted RBP9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 FAM169AQ9Y6X4 670 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 RASSF2P50749 326 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 IMPG2Q9BZV3 1241 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 SMIM23A6NLE4 172 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 SRGAP1Q7Z6B7 1085 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 EIF2AQ9BY44 585 aaKnown RBP9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 FAN1Q9Y2M0 1017 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 PFDN1O60925 122 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 CCDC25Q86WR0 208 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 SPAG1Q07617 926 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 MUM1Q2TAK8 710 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 NAPBQ9H115 298 aa9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 WDR46O15213 610 aaKnown RBP9.52□□□□□ -0.89
NCKAP1-202ENST00000361354 UBLCP1Q8WVY7 318 aaPredicted RBP9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 RNF41Q9H4P4 317 aaPredicted RBP9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 EEF2P13639 858 aaKnown RBP9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 FAF1Q9UNN5 650 aaPredicted RBP9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 CHMP4BP1P59074 171 aa9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 FAM160A1Q05DH4 1040 aa9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 NDUFAB1O14561 156 aa9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 DNAI1Q9UI46 699 aa9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 PSMD6Q15008 389 aa9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 RAB11FIP4Q86YS3 637 aa9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 MICAL1Q8TDZ2 1067 aa9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 SMARCC2Q8TAQ2 1214 aa9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 MYCBPQ99417 103 aaPredicted RBP9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 HAUS7Q99871 368 aa9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 AKNAQ7Z591 1439 aa9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 FAM177BA6PVY3 158 aa9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 IGHMBP2P38935 993 aaKnown RBP9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 MAK16Q9BXY0 300 aaKnown RBP9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 TXNDC9O14530 226 aa9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 SEL1L2Q5TEA6 688 aa9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.51□□□□□ -0.89
NCKAP1-202ENST00000361354 CAPZA3Q96KX2 299 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 AK9Q5TCS8 1911 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 DBN1Q16643 649 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 PLEKHO1Q53GL0 409 aaPredicted RBP9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 DIXDC1Q155Q3 683 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 MKNK2Q9HBH9 465 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 UBA7P41226 1012 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 SAMM50Q9Y512 469 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 ATAD2Q6PL18 1390 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms