RNA–Protein interactions for RNA: ENST00000361204.8

SREBF2-201, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SREBF2, Length 5,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-201ENST00000361204 CCDC144CPQ8IYA2 1237 aa20.54■□□□□ 0.88
SREBF2-201ENST00000361204 GABPB1Q06547 395 aaPredicted RBP20.54■□□□□ 0.88
SREBF2-201ENST00000361204 PPP1R9BQ96SB3 815 aa20.54■□□□□ 0.88
SREBF2-201ENST00000361204 INSRP06213 1382 aa20.53■□□□□ 0.88
SREBF2-201ENST00000361204 DDX46Q7L014 1031 aaKnown RBP20.53■□□□□ 0.88
SREBF2-201ENST00000361204 PYM1Q9BRP8 204 aaKnown RBP20.53■□□□□ 0.88
SREBF2-201ENST00000361204 STRN4Q9NRL3 753 aa20.53■□□□□ 0.88
SREBF2-201ENST00000361204 HSF2BPO75031 334 aa20.53■□□□□ 0.88
SREBF2-201ENST00000361204 TUBB4BP68371 445 aa20.53■□□□□ 0.88
SREBF2-201ENST00000361204 IFIT5Q13325 482 aaKnown RBP20.53■□□□□ 0.88
SREBF2-201ENST00000361204 TICAM2Q86XR7 235 aa20.53■□□□□ 0.88
SREBF2-201ENST00000361204 SPTLC2O15270 562 aa20.52■□□□□ 0.88
SREBF2-201ENST00000361204 GBP2P32456 591 aaPredicted RBP20.52■□□□□ 0.88
SREBF2-201ENST00000361204 SMC1AQ14683 1233 aaKnown RBP20.52■□□□□ 0.88
SREBF2-201ENST00000361204 SLC26A6Q9BXS9 759 aa20.52■□□□□ 0.88
SREBF2-201ENST00000361204 CTAGE9A4FU28 777 aa20.52■□□□□ 0.88
SREBF2-201ENST00000361204 PPP1R12BO60237 982 aaPredicted RBP20.52■□□□□ 0.88
SREBF2-201ENST00000361204 NLRP5P59047 1200 aa20.52■□□□□ 0.88
SREBF2-201ENST00000361204 CCDC194A0A1B0GVG4 234 aa20.52■□□□□ 0.88
SREBF2-201ENST00000361204 IGHMBP2P38935 993 aaKnown RBP20.52■□□□□ 0.88
SREBF2-201ENST00000361204 PROSER2Q86WR7 435 aaPredicted RBP20.52■□□□□ 0.88
SREBF2-201ENST00000361204 GOPCQ9HD26 462 aa20.52■□□□□ 0.88
SREBF2-201ENST00000361204 SNRKQ9NRH2 765 aa20.52■□□□□ 0.88
SREBF2-201ENST00000361204 VPS18Q9P253 973 aa20.52■□□□□ 0.88
SREBF2-201ENST00000361204 TTC41PQ6P2S7 1318 aa20.52■□□□□ 0.88
SREBF2-201ENST00000361204 ZNF500O60304 480 aaPredicted RBP20.52■□□□□ 0.88
SREBF2-201ENST00000361204 ANXA1P04083 346 aa20.51■□□□□ 0.87
SREBF2-201ENST00000361204 SPAG1Q07617 926 aa20.51■□□□□ 0.87
SREBF2-201ENST00000361204 RANBP6O60518 1105 aaKnown RBP20.51■□□□□ 0.87
SREBF2-201ENST00000361204 EZRP15311 586 aaKnown RBP20.51■□□□□ 0.87
SREBF2-201ENST00000361204 MARCKSP29966 332 aaPredicted RBP20.51■□□□□ 0.87
SREBF2-201ENST00000361204 PIP4K2BP78356 416 aa20.51■□□□□ 0.87
SREBF2-201ENST00000361204 ARHGEF12Q9NZN5 1544 aa20.51■□□□□ 0.87
SREBF2-201ENST00000361204 ALG1Q9BT22 464 aa20.51■□□□□ 0.87
SREBF2-201ENST00000361204 TMEM63CQ9P1W3 806 aa20.51■□□□□ 0.87
SREBF2-201ENST00000361204 CREB3L3Q68CJ9 461 aa20.51■□□□□ 0.87
SREBF2-201ENST00000361204 C10orf67Q8IYJ2 551 aa20.51■□□□□ 0.87
SREBF2-201ENST00000361204 GCOM1H8Y6P7 765 aaPredicted RBP20.5■□□□□ 0.87
SREBF2-201ENST00000361204 MYZAPP0CAP1 466 aa20.5■□□□□ 0.87
SREBF2-201ENST00000361204 NMIQ13287 307 aaPredicted RBP20.5■□□□□ 0.87
SREBF2-201ENST00000361204 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.5■□□□□ 0.87
SREBF2-201ENST00000361204 TCOF1Q13428 1488 aaKnown RBP20.5■□□□□ 0.87
SREBF2-201ENST00000361204 UBE3BQ7Z3V4 1068 aa20.5■□□□□ 0.87
SREBF2-201ENST00000361204 RASSF4Q9H2L5 321 aa20.5■□□□□ 0.87
SREBF2-201ENST00000361204 COL17A1Q9UMD9 1497 aaPredicted RBP20.5■□□□□ 0.87
SREBF2-201ENST00000361204 GOLGA6L10A0A0M3HER8 536 aa20.5■□□□□ 0.87
SREBF2-201ENST00000361204 AKR1B10O60218 316 aa20.5■□□□□ 0.87
SREBF2-201ENST00000361204 CYLC1P35663 651 aaPredicted RBP20.5■□□□□ 0.87
SREBF2-201ENST00000361204 RUFY3Q7L099 469 aa20.5■□□□□ 0.87
SREBF2-201ENST00000361204 FAM114A1Q8IWE2 563 aa20.5■□□□□ 0.87
SREBF2-201ENST00000361204 MCMDC2Q4G0Z9 681 aa20.5■□□□□ 0.87
SREBF2-201ENST00000361204 TRIM21P19474 475 aaKnown RBP20.5■□□□□ 0.87
SREBF2-201ENST00000361204 DMRT2Q9Y5R5 561 aa20.5■□□□□ 0.87
SREBF2-201ENST00000361204 MICALL1Q8N3F8 863 aa20.49■□□□□ 0.87
SREBF2-201ENST00000361204 RAB34Q9BZG1 259 aa20.49■□□□□ 0.87
SREBF2-201ENST00000361204 USP5P45974 858 aa20.49■□□□□ 0.87
SREBF2-201ENST00000361204 CATIPQ7Z7H3 387 aa20.49■□□□□ 0.87
SREBF2-201ENST00000361204 OTUD7AQ8TE49 926 aaPredicted RBP20.49■□□□□ 0.87
SREBF2-201ENST00000361204 EBAG9O00559 213 aa20.49■□□□□ 0.87
SREBF2-201ENST00000361204 ZC3H6P61129 1189 aaKnown RBP20.49■□□□□ 0.87
SREBF2-201ENST00000361204 BLMP54132 1417 aaPredicted RBP20.49■□□□□ 0.87
SREBF2-201ENST00000361204 PTCD1O75127 700 aaKnown RBP20.49■□□□□ 0.87
SREBF2-201ENST00000361204 TUBBP07437 444 aa20.49■□□□□ 0.87
SREBF2-201ENST00000361204 UBA7P41226 1012 aa20.49■□□□□ 0.87
SREBF2-201ENST00000361204 TMCO5BA8MYB1 307 aa20.48■□□□□ 0.87
SREBF2-201ENST00000361204 PHACTR2O75167 634 aa20.48■□□□□ 0.87
SREBF2-201ENST00000361204 EVCP57679 992 aa20.48■□□□□ 0.87
SREBF2-201ENST00000361204 TTC31Q49AM3 519 aaPredicted RBP20.48■□□□□ 0.87
SREBF2-201ENST00000361204 NBPF11Q86T75 865 aa20.48■□□□□ 0.87
SREBF2-201ENST00000361204 TRIM47Q96LD4 638 aa20.48■□□□□ 0.87
SREBF2-201ENST00000361204 SEC63Q9UGP8 760 aaKnown RBP20.48■□□□□ 0.87
SREBF2-201ENST00000361204 KARSQ15046 597 aaKnown RBP20.48■□□□□ 0.87
SREBF2-201ENST00000361204 SPECC1LQ69YQ0 1117 aa20.48■□□□□ 0.87
SREBF2-201ENST00000361204 OPA1O60313 960 aa20.47■□□□□ 0.87
SREBF2-201ENST00000361204 AFMP43652 599 aa20.47■□□□□ 0.87
SREBF2-201ENST00000361204 ANKRD24Q8TF21 1146 aa20.47■□□□□ 0.87
SREBF2-201ENST00000361204 UTP14AQ9BVJ6 771 aaKnown RBP20.47■□□□□ 0.87
SREBF2-201ENST00000361204 POLKQ9UBT6 870 aa20.47■□□□□ 0.87
SREBF2-201ENST00000361204 TCP11L1Q9NUJ3 509 aa20.47■□□□□ 0.87
SREBF2-201ENST00000361204 NPC1L1Q9UHC9 1359 aa20.47■□□□□ 0.87
SREBF2-201ENST00000361204 SOS1Q07889 1333 aaPredicted RBP20.47■□□□□ 0.87
SREBF2-201ENST00000361204 RRAGBQ5VZM2 374 aa20.47■□□□□ 0.87
SREBF2-201ENST00000361204 RMND1Q9NWS8 449 aa20.47■□□□□ 0.87
SREBF2-201ENST00000361204 PUF60Q9UHX1 559 aaKnown RBP20.47■□□□□ 0.87
SREBF2-201ENST00000361204 FSD2A1L4K1 749 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 HSPA4P34932 840 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 LZTFL1Q9NQ48 299 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 ZBTB43O43298 467 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 CETN2P41208 172 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 AMPD3Q01432 767 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 GAS2L3Q86XJ1 694 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 BCL2L12Q9HB09 334 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 CHPF2Q9P2E5 772 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 GSTTP1A0A1W2PQM5 241 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 GADD45BO75293 160 aaPredicted RBP20.46■□□□□ 0.87
SREBF2-201ENST00000361204 ALDH1L1O75891 902 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 STARD3NLO95772 234 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 CPA1P15085 419 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 ZNF75DP51815 510 aa20.46■□□□□ 0.87
SREBF2-201ENST00000361204 TTF1Q15361 905 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms