RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 PDE8AO60658 829 aa28.13■■■□□ 2.09
SNX3-202ENST00000349379 GRAPQ13588 217 aa28.13■■■□□ 2.09
SNX3-202ENST00000349379 RTKN2Q8IZC4 609 aa28.13■■■□□ 2.09
SNX3-202ENST00000349379 GRAPLQ8TC17 118 aaPredicted RBP28.13■■■□□ 2.09
SNX3-202ENST00000349379 PTPRCP08575 1304 aa28.13■■■□□ 2.09
SNX3-202ENST00000349379 ZC3H4Q9UPT8 1303 aaKnown RBP28.13■■■□□ 2.09
SNX3-202ENST00000349379 BBOX1O75936 387 aa28.12■■■□□ 2.09
SNX3-202ENST00000349379 CASP7P55210 303 aa28.12■■■□□ 2.09
SNX3-202ENST00000349379 BRPF1P55201 1214 aaPredicted RBP28.11■■■□□ 2.09
SNX3-202ENST00000349379 FKBP4Q02790 459 aaKnown RBP eCLIP28.11■■■□□ 2.09
SNX3-202ENST00000349379 SLC51AQ86UW1 340 aa28.11■■■□□ 2.09
SNX3-202ENST00000349379 BCL2L13Q9BXK5 485 aa28.11■■■□□ 2.09
SNX3-202ENST00000349379 ATP6V0A2Q9Y487 856 aa28.11■■■□□ 2.09
SNX3-202ENST00000349379 GRIPAP1Q4V328 841 aa28.1■■■□□ 2.09
SNX3-202ENST00000349379 LTBP1Q14766 1721 aa28.09■■■□□ 2.09
SNX3-202ENST00000349379 UBE3BQ7Z3V4 1068 aa28.09■■■□□ 2.09
SNX3-202ENST00000349379 PSMD1Q99460 953 aa28.09■■■□□ 2.09
SNX3-202ENST00000349379 PLA2G12BQ9BX93 195 aa28.09■■■□□ 2.09
SNX3-202ENST00000349379 SMC4Q9NTJ3 1288 aa28.09■■■□□ 2.09
SNX3-202ENST00000349379 SPEF2Q9C093 1822 aa28.08■■■□□ 2.09
SNX3-202ENST00000349379 SP8Q8IXZ3 490 aa28.08■■■□□ 2.09
SNX3-202ENST00000349379 CELF1Q92879 486 aaKnown RBP28.08■■■□□ 2.09
SNX3-202ENST00000349379 ALDH1L1O75891 902 aa28.07■■■□□ 2.08
SNX3-202ENST00000349379 RARSP54136 660 aaKnown RBP28.07■■■□□ 2.08
SNX3-202ENST00000349379 TMC4Q7Z404 712 aa28.07■■■□□ 2.08
SNX3-202ENST00000349379 CTSWP56202 376 aa28.06■■■□□ 2.08
SNX3-202ENST00000349379 CCDC152Q4G0S7 254 aa28.06■■■□□ 2.08
SNX3-202ENST00000349379 RTL9Q8NET4 1388 aa28.06■■■□□ 2.08
SNX3-202ENST00000349379 DUOX1Q9NRD9 1551 aa28.06■■■□□ 2.08
SNX3-202ENST00000349379 TTLL11Q8NHH1 800 aa28.05■■■□□ 2.08
SNX3-202ENST00000349379 SLC4A10Q6U841 1118 aa28.04■■■□□ 2.08
SNX3-202ENST00000349379 SRCIN1Q9C0H9 1055 aa28.04■■■□□ 2.08
SNX3-202ENST00000349379 SEC31BQ9NQW1 1179 aa28.04■■■□□ 2.08
SNX3-202ENST00000349379 ZNF277Q9NRM2 450 aaPredicted RBP28.03■■■□□ 2.08
SNX3-202ENST00000349379 COL4A5P29400 1685 aa28.03■■■□□ 2.08
SNX3-202ENST00000349379 GRM8O00222 908 aa28.02■■■□□ 2.08
SNX3-202ENST00000349379 RPS8P62241 208 aaKnown RBP28.02■■■□□ 2.08
SNX3-202ENST00000349379 GPBP1L1Q9HC44 474 aaPredicted RBP28.02■■■□□ 2.08
SNX3-202ENST00000349379 IARSP41252 1262 aaKnown RBP28.01■■■□□ 2.07
SNX3-202ENST00000349379 RTFDC1Q9BY42 306 aaPredicted RBP28.01■■■□□ 2.07
SNX3-202ENST00000349379 CSF1RP07333 972 aa28■■■□□ 2.07
SNX3-202ENST00000349379 ZNF526Q8TF50 670 aaPredicted RBP28■■■□□ 2.07
SNX3-202ENST00000349379 CCDC85AQ96PX6 553 aaPredicted RBP28■■■□□ 2.07
SNX3-202ENST00000349379 TMX4Q9H1E5 349 aaPredicted RBP28■■■□□ 2.07
SNX3-202ENST00000349379 WDR90Q96KV7 1748 aa28■■■□□ 2.07
SNX3-202ENST00000349379 UTYO14607 1347 aa27.99■■■□□ 2.07
SNX3-202ENST00000349379 GREM2Q9H772 168 aa27.99■■■□□ 2.07
SNX3-202ENST00000349379 NOB1Q9ULX3 412 aaKnown RBP27.99■■■□□ 2.07
SNX3-202ENST00000349379 KIF16BQ96L93 1317 aa27.97■■■□□ 2.07
SNX3-202ENST00000349379 A0A1B0GUL6 1792 aa27.97■■■□□ 2.07
SNX3-202ENST00000349379 FOXO4P98177 505 aa27.97■■■□□ 2.07
SNX3-202ENST00000349379 MPNDQ8N594 471 aa27.97■■■□□ 2.07
SNX3-202ENST00000349379 KDM2BQ8NHM5 1336 aa27.96■■■□□ 2.07
SNX3-202ENST00000349379 GLTPD2A6NH11 291 aa27.96■■■□□ 2.07
SNX3-202ENST00000349379 DPP8Q6V1X1 898 aaPredicted RBP27.96■■■□□ 2.07
SNX3-202ENST00000349379 ARHGAP45Q92619 1136 aa27.96■■■□□ 2.07
SNX3-202ENST00000349379 VPS33BQ9H267 617 aa27.96■■■□□ 2.07
SNX3-202ENST00000349379 C9orf78Q9NZ63 289 aaPredicted RBP27.96■■■□□ 2.07
SNX3-202ENST00000349379 SUPT20HQ8NEM7 779 aa27.95■■■□□ 2.06
SNX3-202ENST00000349379 CDC5LQ99459 802 aaKnown RBP27.95■■■□□ 2.06
SNX3-202ENST00000349379 API5Q9BZZ5 524 aaKnown RBP27.95■■■□□ 2.06
SNX3-202ENST00000349379 KIF3CO14782 793 aa27.94■■■□□ 2.06
SNX3-202ENST00000349379 FAM161AQ3B820 660 aa27.94■■■□□ 2.06
SNX3-202ENST00000349379 EPHA10Q5JZY3 1008 aa27.94■■■□□ 2.06
SNX3-202ENST00000349379 ANKRD18AQ8IVF6 992 aa27.94■■■□□ 2.06
SNX3-202ENST00000349379 FZD9O00144 591 aa27.93■■■□□ 2.06
SNX3-202ENST00000349379 NBPF7P0C2Y1 421 aaPredicted RBP27.93■■■□□ 2.06
SNX3-202ENST00000349379 NMRK2Q9NPI5 230 aa27.93■■■□□ 2.06
SNX3-202ENST00000349379 GPSM2P81274 684 aa27.92■■■□□ 2.06
SNX3-202ENST00000349379 KAZALD1Q96I82 304 aa27.92■■■□□ 2.06
SNX3-202ENST00000349379 PODXL2Q9NZ53 605 aa27.92■■■□□ 2.06
SNX3-202ENST00000349379 SCN4AP35499 1836 aa27.92■■■□□ 2.06
SNX3-202ENST00000349379 BCAR3O75815 825 aa27.91■■■□□ 2.06
SNX3-202ENST00000349379 ITGA6P23229 1130 aa27.91■■■□□ 2.06
SNX3-202ENST00000349379 USP44Q9H0E7 712 aa27.91■■■□□ 2.06
SNX3-202ENST00000349379 CCT4P50991 539 aaKnown RBP27.9■■■□□ 2.06
SNX3-202ENST00000349379 KIAA2012Q0VF49 1180 aa27.9■■■□□ 2.06
SNX3-202ENST00000349379 DPY19L2Q6NUT2 758 aa27.9■■■□□ 2.06
SNX3-202ENST00000349379 LARGE2Q8N3Y3 721 aa27.9■■■□□ 2.06
SNX3-202ENST00000349379 SUCLG2Q96I99 432 aa27.9■■■□□ 2.06
SNX3-202ENST00000349379 BSDC1Q9NW68 430 aaPredicted RBP27.9■■■□□ 2.06
SNX3-202ENST00000349379 NSFL1CQ9UNZ2 370 aaKnown RBP27.9■■■□□ 2.06
SNX3-202ENST00000349379 PPIP5K2O43314 1243 aa27.89■■■□□ 2.06
SNX3-202ENST00000349379 AOC3Q16853 763 aa27.89■■■□□ 2.06
SNX3-202ENST00000349379 JDP2Q8WYK2 163 aa27.89■■■□□ 2.06
SNX3-202ENST00000349379 ZNF541Q9H0D2 1346 aa27.89■■■□□ 2.05
SNX3-202ENST00000349379 LMBR1LQ6UX01 489 aa27.88■■■□□ 2.05
SNX3-202ENST00000349379 POLLQ9UGP5 575 aa27.88■■■□□ 2.05
SNX3-202ENST00000349379 RABL6Q3YEC7 729 aaPredicted RBP27.87■■■□□ 2.05
SNX3-202ENST00000349379 TBC1D16Q8TBP0 767 aa27.87■■■□□ 2.05
SNX3-202ENST00000349379 PSME4Q14997 1843 aa27.86■■■□□ 2.05
SNX3-202ENST00000349379 ANKRD18BA2A2Z9 1011 aa27.86■■■□□ 2.05
SNX3-202ENST00000349379 POTECB2RU33 542 aa27.86■■■□□ 2.05
SNX3-202ENST00000349379 IPO8O15397 1037 aaKnown RBP27.86■■■□□ 2.05
SNX3-202ENST00000349379 TRIM27P14373 513 aa27.86■■■□□ 2.05
SNX3-202ENST00000349379 DDNO94850 711 aaPredicted RBP27.85■■■□□ 2.05
SNX3-202ENST00000349379 IGHMBP2P38935 993 aaKnown RBP27.85■■■□□ 2.05
SNX3-202ENST00000349379 INTS3Q68E01 1043 aaKnown RBP27.85■■■□□ 2.05
SNX3-202ENST00000349379 ATF7IPQ6VMQ6 1270 aa27.85■■■□□ 2.05
SNX3-202ENST00000349379 NIM1KQ8IY84 436 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms