RNA–Protein interactions for RNA: ENST00000344691.8

RUNX1-202, Transcript of runt related transcription factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RUNX1, Length 7,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-202ENST00000344691 SF3A3Q12874 501 aaKnown RBP eCLIP17.46■□□□□ 0.39
RUNX1-202ENST00000344691 TTF1Q15361 905 aaPredicted RBP17.46■□□□□ 0.39
RUNX1-202ENST00000344691 GNG11P61952 73 aa17.46■□□□□ 0.39
RUNX1-202ENST00000344691 TAF12Q16514 161 aa17.46■□□□□ 0.39
RUNX1-202ENST00000344691 C8orf37Q96NL8 207 aa17.46■□□□□ 0.39
RUNX1-202ENST00000344691 AMPD3Q01432 767 aa17.46■□□□□ 0.39
RUNX1-202ENST00000344691 N4BP3O15049 544 aa17.46■□□□□ 0.39
RUNX1-202ENST00000344691 PLCB3Q01970 1234 aa17.46■□□□□ 0.39
RUNX1-202ENST00000344691 SLC4A4Q9Y6R1 1079 aa17.46■□□□□ 0.38
RUNX1-202ENST00000344691 BAG3O95817 575 aa17.45■□□□□ 0.38
RUNX1-202ENST00000344691 CCDC6Q16204 474 aa17.45■□□□□ 0.38
RUNX1-202ENST00000344691 CWC25Q9NXE8 425 aaPredicted RBP17.45■□□□□ 0.38
RUNX1-202ENST00000344691 SLC39A6Q13433 755 aa17.45■□□□□ 0.38
RUNX1-202ENST00000344691 RNF41Q9H4P4 317 aaPredicted RBP17.45■□□□□ 0.38
RUNX1-202ENST00000344691 HSF2BPO75031 334 aa17.45■□□□□ 0.38
RUNX1-202ENST00000344691 PHAXQ9H814 394 aaKnown RBP17.45■□□□□ 0.38
RUNX1-202ENST00000344691 LIMCH1Q9UPQ0 1083 aa17.45■□□□□ 0.38
RUNX1-202ENST00000344691 RPGRIP1LQ68CZ1 1315 aa17.45■□□□□ 0.38
RUNX1-202ENST00000344691 FCHSD2O94868 740 aa17.45■□□□□ 0.38
RUNX1-202ENST00000344691 TNPO1Q92973 898 aaKnown RBP17.45■□□□□ 0.38
RUNX1-202ENST00000344691 RPAP2Q8IXW5 612 aaPredicted RBP17.45■□□□□ 0.38
RUNX1-202ENST00000344691 ATP6V1AP38606 617 aa17.44■□□□□ 0.38
RUNX1-202ENST00000344691 CCDC65Q8IXS2 484 aa17.44■□□□□ 0.38
RUNX1-202ENST00000344691 ERCC5P28715 1186 aaPredicted RBP17.44■□□□□ 0.38
RUNX1-202ENST00000344691 KIF5BP33176 963 aa17.44■□□□□ 0.38
RUNX1-202ENST00000344691 NAA15Q9BXJ9 866 aaKnown RBP17.44■□□□□ 0.38
RUNX1-202ENST00000344691 MCM6Q14566 821 aa17.44■□□□□ 0.38
RUNX1-202ENST00000344691 CEP135Q66GS9 1140 aa17.44■□□□□ 0.38
RUNX1-202ENST00000344691 GJA3Q9Y6H8 435 aa17.44■□□□□ 0.38
RUNX1-202ENST00000344691 RASA3Q14644 834 aa17.44■□□□□ 0.38
RUNX1-202ENST00000344691 PPP2R5DQ14738 602 aa17.44■□□□□ 0.38
RUNX1-202ENST00000344691 MIGA1Q8NAN2 632 aa17.44■□□□□ 0.38
RUNX1-202ENST00000344691 FERMT1Q9BQL6 677 aa17.44■□□□□ 0.38
RUNX1-202ENST00000344691 KCNH5Q8NCM2 988 aa17.43■□□□□ 0.38
RUNX1-202ENST00000344691 HELBQ8NG08 1087 aaPredicted RBP17.43■□□□□ 0.38
RUNX1-202ENST00000344691 IQCGQ9H095 443 aaKnown RBP17.43■□□□□ 0.38
RUNX1-202ENST00000344691 KIF21BO75037 1637 aa17.43■□□□□ 0.38
RUNX1-202ENST00000344691 UAP1Q16222 522 aaPredicted RBP17.43■□□□□ 0.38
RUNX1-202ENST00000344691 STX1AQ16623 288 aa17.43■□□□□ 0.38
RUNX1-202ENST00000344691 KLF18A0A0U1RQI7 1052 aa17.43■□□□□ 0.38
RUNX1-202ENST00000344691 SAP30BPQ9UHR5 308 aaKnown RBP17.43■□□□□ 0.38
RUNX1-202ENST00000344691 UBASH3AP57075 661 aa17.43■□□□□ 0.38
RUNX1-202ENST00000344691 WTAPQ15007 396 aa17.43■□□□□ 0.38
RUNX1-202ENST00000344691 CDC5LQ99459 802 aaKnown RBP17.43■□□□□ 0.38
RUNX1-202ENST00000344691 KRT28Q7Z3Y7 464 aa17.43■□□□□ 0.38
RUNX1-202ENST00000344691 NEK1Q96PY6 1258 aa17.43■□□□□ 0.38
RUNX1-202ENST00000344691 ZKSCAN3Q9BRR0 538 aa17.43■□□□□ 0.38
RUNX1-202ENST00000344691 PI4KAP2A4QPH2 592 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 MAEAQ7L5Y9 396 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 PI4KAP1Q8N8J0 262 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 SCAND2PQ9GZW5 306 aaPredicted RBP17.42■□□□□ 0.38
RUNX1-202ENST00000344691 STX17P56962 302 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 ZSCAN30Q86W11 494 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 GINS2Q9Y248 185 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 HGSO14964 777 aaPredicted RBP17.42■□□□□ 0.38
RUNX1-202ENST00000344691 PRKG1Q13976 671 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 CEP112Q8N8E3 955 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 ODF2LQ9ULJ1 636 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 CNPY2Q9Y2B0 182 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 AKR1B10O60218 316 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 CSPG5O95196 566 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 SLFN5Q08AF3 891 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 CLSTN2Q9H4D0 955 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 DHX58Q96C10 678 aa17.42■□□□□ 0.38
RUNX1-202ENST00000344691 KRT9P35527 623 aa17.41■□□□□ 0.38
RUNX1-202ENST00000344691 TPD52P55327 224 aaPredicted RBP17.41■□□□□ 0.38
RUNX1-202ENST00000344691 FNBP4Q8N3X1 1017 aaPredicted RBP17.41■□□□□ 0.38
RUNX1-202ENST00000344691 C9orf84Q5VXU9 1444 aa17.41■□□□□ 0.38
RUNX1-202ENST00000344691 NAPAP54920 295 aa17.41■□□□□ 0.38
RUNX1-202ENST00000344691 PPP1R42Q7Z4L9 355 aa17.41■□□□□ 0.38
RUNX1-202ENST00000344691 TTC21AQ8NDW8 1320 aa17.41■□□□□ 0.38
RUNX1-202ENST00000344691 LRRC9Q6ZRR7 1453 aa17.41■□□□□ 0.38
RUNX1-202ENST00000344691 ERCC3P19447 782 aa17.41■□□□□ 0.38
RUNX1-202ENST00000344691 SYKP43405 635 aa17.41■□□□□ 0.38
RUNX1-202ENST00000344691 EP400NLQ6ZTU2 488 aa17.41■□□□□ 0.38
RUNX1-202ENST00000344691 CCDC114Q96M63 670 aa17.41■□□□□ 0.38
RUNX1-202ENST00000344691 CRNKL1Q9BZJ0 848 aaKnown RBP17.41■□□□□ 0.38
RUNX1-202ENST00000344691 HYPKQ9NX55 129 aa17.41■□□□□ 0.38
RUNX1-202ENST00000344691 MCM7P33993 719 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 KARSQ15046 597 aaKnown RBP17.4■□□□□ 0.38
RUNX1-202ENST00000344691 ALG1Q9BT22 464 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 CCDC61Q9Y6R9 512 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 HMGB1P09429 215 aaKnown RBP17.4■□□□□ 0.38
RUNX1-202ENST00000344691 HCLS1P14317 486 aaPredicted RBP17.4■□□□□ 0.38
RUNX1-202ENST00000344691 ZBTB16Q05516 673 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 ZYXQ15942 572 aaKnown RBP17.4■□□□□ 0.38
RUNX1-202ENST00000344691 TBC1D9Q6ZT07 1266 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 STXBP4Q6ZWJ1 553 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 MCM3P25205 808 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 RNASE9P60153 205 aaKnown RBP17.4■□□□□ 0.38
RUNX1-202ENST00000344691 NCOA7Q8NI08 942 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 SPAG5Q96R06 1193 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 SETDB2Q96T68 719 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 MICALCLQ6ZW33 695 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 SPATA24Q86W54 205 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 PRG4Q92954 1404 aaPredicted RBP17.4■□□□□ 0.38
RUNX1-202ENST00000344691 ANO6Q4KMQ2 910 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 EVI5LQ96CN4 794 aa17.4■□□□□ 0.38
RUNX1-202ENST00000344691 SMARCC2Q8TAQ2 1214 aa17.39■□□□□ 0.38
RUNX1-202ENST00000344691 EIF6P56537 245 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms