RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SASH1O94885 1247 aa18.16■□□□□ 0.5
CXCL12-201ENST00000343575 FAM161AQ3B820 660 aa18.16■□□□□ 0.5
CXCL12-201ENST00000343575 PLEKHM2Q8IWE5 1019 aa18.16■□□□□ 0.5
CXCL12-201ENST00000343575 SETDB2Q96T68 719 aa18.16■□□□□ 0.5
CXCL12-201ENST00000343575 PNPLA7Q6ZV29 1317 aa18.15■□□□□ 0.5
CXCL12-201ENST00000343575 ERFEQ4G0M1 354 aa18.15■□□□□ 0.5
CXCL12-201ENST00000343575 CCDC85AQ96PX6 553 aaPredicted RBP18.15■□□□□ 0.5
CXCL12-201ENST00000343575 SIL1Q9H173 461 aa18.15■□□□□ 0.5
CXCL12-201ENST00000343575 SALL3Q9BXA9 1300 aa18.14■□□□□ 0.5
CXCL12-201ENST00000343575 TM4SF1P30408 202 aa18.14■□□□□ 0.49
CXCL12-201ENST00000343575 ZNF594Q96JF6 807 aaPredicted RBP18.14■□□□□ 0.49
CXCL12-201ENST00000343575 GREM2Q9H772 168 aa18.14■□□□□ 0.49
CXCL12-201ENST00000343575 IL1RAPL2Q9NP60 686 aa18.14■□□□□ 0.49
CXCL12-201ENST00000343575 CHMP3Q9Y3E7 222 aa18.14■□□□□ 0.49
CXCL12-201ENST00000343575 C3orf67Q6ZVT6 689 aa18.14■□□□□ 0.49
CXCL12-201ENST00000343575 KIF1BPQ96EK5 621 aa18.14■□□□□ 0.49
CXCL12-201ENST00000343575 ABCC12Q96J65 1359 aa18.13■□□□□ 0.49
CXCL12-201ENST00000343575 LAMB2P55268 1798 aa18.13■□□□□ 0.49
CXCL12-201ENST00000343575 BAG6P46379 1132 aa18.13■□□□□ 0.49
CXCL12-201ENST00000343575 HSP90AB4PQ58FF6 505 aa18.13■□□□□ 0.49
CXCL12-201ENST00000343575 SLC10A5Q5PT55 438 aa18.13■□□□□ 0.49
CXCL12-201ENST00000343575 ATG9AQ7Z3C6 839 aa18.13■□□□□ 0.49
CXCL12-201ENST00000343575 SF3B2Q13435 895 aaKnown RBP18.12■□□□□ 0.49
CXCL12-201ENST00000343575 SLC15A2Q16348 729 aa18.12■□□□□ 0.49
CXCL12-201ENST00000343575 PUS3Q9BZE2 481 aaKnown RBP18.12■□□□□ 0.49
CXCL12-201ENST00000343575 ITGA6P23229 1130 aa18.11■□□□□ 0.49
CXCL12-201ENST00000343575 G3BP1Q13283 466 aaKnown RBP eCLIP18.11■□□□□ 0.49
CXCL12-201ENST00000343575 NBPF5PQ86XG9 351 aaPredicted RBP18.11■□□□□ 0.49
CXCL12-201ENST00000343575 CCDC24Q8N4L8 307 aa18.11■□□□□ 0.49
CXCL12-201ENST00000343575 CARMIL3Q8ND23 1372 aa18.1■□□□□ 0.49
CXCL12-201ENST00000343575 DDR1Q08345 913 aa18.1■□□□□ 0.49
CXCL12-201ENST00000343575 CCDC57Q2TAC2 916 aa18.1■□□□□ 0.49
CXCL12-201ENST00000343575 LRRC24Q50LG9 513 aa18.1■□□□□ 0.49
CXCL12-201ENST00000343575 COL4A1P02462 1669 aa18.1■□□□□ 0.49
CXCL12-201ENST00000343575 IFIT5Q13325 482 aaKnown RBP18.09■□□□□ 0.49
CXCL12-201ENST00000343575 OS9Q13438 667 aaPredicted RBP18.09■□□□□ 0.49
CXCL12-201ENST00000343575 TPTE2Q6XPS3 522 aa18.09■□□□□ 0.49
CXCL12-201ENST00000343575 FLAD1Q8NFF5 587 aa18.09■□□□□ 0.49
CXCL12-201ENST00000343575 NYXQ9GZU5 481 aa18.09■□□□□ 0.49
CXCL12-201ENST00000343575 ERC1Q8IUD2 1116 aa18.09■□□□□ 0.49
CXCL12-201ENST00000343575 SEC31BQ9NQW1 1179 aa18.09■□□□□ 0.49
CXCL12-201ENST00000343575 CASZ1Q86V15 1759 aa18.09■□□□□ 0.49
CXCL12-201ENST00000343575 EYA2O00167 538 aa18.08■□□□□ 0.49
CXCL12-201ENST00000343575 POLRMTO00411 1230 aaKnown RBP18.08■□□□□ 0.49
CXCL12-201ENST00000343575 PDE1AP54750 535 aa18.08■□□□□ 0.49
CXCL12-201ENST00000343575 SF3B3Q15393 1217 aaKnown RBP18.08■□□□□ 0.49
CXCL12-201ENST00000343575 CCDC125Q86Z20 511 aa18.08■□□□□ 0.49
CXCL12-201ENST00000343575 EAF2Q96CJ1 260 aaPredicted RBP18.08■□□□□ 0.49
CXCL12-201ENST00000343575 OSBPL3Q9H4L5 887 aa18.08■□□□□ 0.49
CXCL12-201ENST00000343575 CIAO1O76071 339 aa18.07■□□□□ 0.48
CXCL12-201ENST00000343575 TFCP2Q12800 502 aa18.07■□□□□ 0.48
CXCL12-201ENST00000343575 C8orf34Q49A92 452 aa18.07■□□□□ 0.48
CXCL12-201ENST00000343575 PRR5LQ6MZQ0 368 aa18.07■□□□□ 0.48
CXCL12-201ENST00000343575 RTL9Q8NET4 1388 aa18.07■□□□□ 0.48
CXCL12-201ENST00000343575 GSPT1P15170 499 aaKnown RBP18.07■□□□□ 0.48
CXCL12-201ENST00000343575 TSHZ3Q63HK5 1081 aa18.07■□□□□ 0.48
CXCL12-201ENST00000343575 STAP2Q9UGK3 403 aa18.07■□□□□ 0.48
CXCL12-201ENST00000343575 TNRC6CQ9HCJ0 1690 aaKnown RBP18.06■□□□□ 0.48
CXCL12-201ENST00000343575 QSER1Q2KHR3 1735 aa18.06■□□□□ 0.48
CXCL12-201ENST00000343575 ANKRD18BA2A2Z9 1011 aa18.06■□□□□ 0.48
CXCL12-201ENST00000343575 SERPINB2P05120 415 aa18.06■□□□□ 0.48
CXCL12-201ENST00000343575 PDGFDQ9GZP0 370 aaPredicted RBP18.06■□□□□ 0.48
CXCL12-201ENST00000343575 STK32BQ9NY57 414 aa18.06■□□□□ 0.48
CXCL12-201ENST00000343575 RIPOR2Q9Y4F9 1068 aa18.06■□□□□ 0.48
CXCL12-201ENST00000343575 LRP5O75197 1615 aa18.06■□□□□ 0.48
CXCL12-201ENST00000343575 HSP90B1P14625 803 aaKnown RBP18.05■□□□□ 0.48
CXCL12-201ENST00000343575 MX1P20591 662 aa18.05■□□□□ 0.48
CXCL12-201ENST00000343575 GTF2E1P29083 439 aaPredicted RBP18.05■□□□□ 0.48
CXCL12-201ENST00000343575 CCDC152Q4G0S7 254 aa18.05■□□□□ 0.48
CXCL12-201ENST00000343575 CLASRPQ8N2M8 674 aaKnown RBP18.05■□□□□ 0.48
CXCL12-201ENST00000343575 NLGN1Q8N2Q7 840 aa18.05■□□□□ 0.48
CXCL12-201ENST00000343575 FBXO3Q9UK99 471 aa18.05■□□□□ 0.48
CXCL12-201ENST00000343575 TAF1P21675 1872 aa18.05■□□□□ 0.48
CXCL12-201ENST00000343575 IL15P40933 162 aaPredicted RBP18.05■□□□□ 0.48
CXCL12-201ENST00000343575 BMP2KLQ5H9B9 411 aa18.05■□□□□ 0.48
CXCL12-201ENST00000343575 TTC22Q5TAA0 569 aa18.05■□□□□ 0.48
CXCL12-201ENST00000343575 TLR7Q9NYK1 1049 aaKnown RBP18.05■□□□□ 0.48
CXCL12-201ENST00000343575 CNBD1Q8NA66 436 aa18.04■□□□□ 0.48
CXCL12-201ENST00000343575 TNNI3KQ59H18 835 aa18.03■□□□□ 0.48
CXCL12-201ENST00000343575 LDHAL6AQ6ZMR3 332 aa18.03■□□□□ 0.48
CXCL12-201ENST00000343575 AACSQ86V21 672 aa18.03■□□□□ 0.48
CXCL12-201ENST00000343575 FPGT-TNNI3KV9GXZ4 949 aa18.03■□□□□ 0.48
CXCL12-201ENST00000343575 NRXN2Q9P2S2 1712 aa18.03■□□□□ 0.48
CXCL12-201ENST00000343575 RIC1Q4ADV7 1423 aa18.03■□□□□ 0.48
CXCL12-201ENST00000343575 MSL1Q68DK7 614 aa18.03■□□□□ 0.48
CXCL12-201ENST00000343575 PI4K2BQ8TCG2 481 aa18.03■□□□□ 0.48
CXCL12-201ENST00000343575 UPF1Q92900 1129 aaKnown RBP eCLIP18.03■□□□□ 0.48
CXCL12-201ENST00000343575 NLRP3Q96P20 1036 aa18.03■□□□□ 0.48
CXCL12-201ENST00000343575 CCDC8Q9H0W5 538 aaPredicted RBP18.03■□□□□ 0.48
CXCL12-201ENST00000343575 TAF7LQ5H9L4 462 aa18.02■□□□□ 0.48
CXCL12-201ENST00000343575 VGLL2Q8N8G2 317 aa18.02■□□□□ 0.48
CXCL12-201ENST00000343575 DBNLQ9UJU6 430 aaKnown RBP18.01■□□□□ 0.47
CXCL12-201ENST00000343575 MMP10P09238 476 aa18.01■□□□□ 0.47
CXCL12-201ENST00000343575 CELF1Q92879 486 aaKnown RBP18.01■□□□□ 0.47
CXCL12-201ENST00000343575 GPR108Q9NPR9 543 aa18.01■□□□□ 0.47
CXCL12-201ENST00000343575 TIMM10P62072 90 aa18■□□□□ 0.47
CXCL12-201ENST00000343575 AOX1Q06278 1338 aa17.99■□□□□ 0.47
CXCL12-201ENST00000343575 IFIT2P09913 472 aaKnown RBP17.99■□□□□ 0.47
CXCL12-201ENST00000343575 PRKCSHP14314 528 aaPredicted RBP17.99■□□□□ 0.47
CXCL12-201ENST00000343575 CRY2Q49AN0 593 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms