RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 KIF5BP33176 963 aa22.35■■□□□ 1.17
SH2B3-201ENST00000341259 PDCL3Q9H2J4 239 aa22.35■■□□□ 1.17
SH2B3-201ENST00000341259 CNPY2Q9Y2B0 182 aa22.35■■□□□ 1.17
SH2B3-201ENST00000341259 KDM2BQ8NHM5 1336 aa22.35■■□□□ 1.17
SH2B3-201ENST00000341259 CHMLP26374 656 aa22.35■■□□□ 1.17
SH2B3-201ENST00000341259 DDB1Q16531 1140 aa22.35■■□□□ 1.17
SH2B3-201ENST00000341259 KAT14Q9H8E8 782 aa22.35■■□□□ 1.17
SH2B3-201ENST00000341259 CRNKL1Q9BZJ0 848 aaKnown RBP22.34■■□□□ 1.17
SH2B3-201ENST00000341259 DZIP3Q86Y13 1208 aaKnown RBP22.34■■□□□ 1.17
SH2B3-201ENST00000341259 UTP14AQ9BVJ6 771 aaKnown RBP22.34■■□□□ 1.17
SH2B3-201ENST00000341259 KRT23Q9C075 422 aa22.34■■□□□ 1.17
SH2B3-201ENST00000341259 DDX21Q9NR30 783 aaKnown RBP eCLIP22.34■■□□□ 1.17
SH2B3-201ENST00000341259 CYP7A1P22680 504 aa22.34■■□□□ 1.17
SH2B3-201ENST00000341259 NIP7Q9Y221 180 aaKnown RBP eCLIP22.33■■□□□ 1.17
SH2B3-201ENST00000341259 SLC4A4Q9Y6R1 1079 aa22.33■■□□□ 1.17
SH2B3-201ENST00000341259 TOP1P11387 765 aaKnown RBP22.33■■□□□ 1.17
SH2B3-201ENST00000341259 SLC4A8Q2Y0W8 1093 aa22.33■■□□□ 1.17
SH2B3-201ENST00000341259 WTAPQ15007 396 aa22.33■■□□□ 1.17
SH2B3-201ENST00000341259 ARHGAP29Q52LW3 1261 aa22.33■■□□□ 1.17
SH2B3-201ENST00000341259 SMARCC1Q92922 1105 aaPredicted RBP22.33■■□□□ 1.17
SH2B3-201ENST00000341259 BIN1O00499 593 aa22.33■■□□□ 1.16
SH2B3-201ENST00000341259 SLC9C2Q5TAH2 1124 aa22.33■■□□□ 1.16
SH2B3-201ENST00000341259 WWC2Q6AWC2 1192 aa22.33■■□□□ 1.16
SH2B3-201ENST00000341259 ZNF219Q9P2Y4 722 aaPredicted RBP22.33■■□□□ 1.16
SH2B3-201ENST00000341259 HSPA2P54652 639 aa22.32■■□□□ 1.16
SH2B3-201ENST00000341259 TMEM266Q2M3C6 531 aa22.32■■□□□ 1.16
SH2B3-201ENST00000341259 KIAA1328Q86T90 577 aa22.32■■□□□ 1.16
SH2B3-201ENST00000341259 USP26Q9BXU7 913 aa22.32■■□□□ 1.16
SH2B3-201ENST00000341259 ZNF397Q8NF99 534 aaPredicted RBP22.32■■□□□ 1.16
SH2B3-201ENST00000341259 RAB34Q9BZG1 259 aa22.32■■□□□ 1.16
SH2B3-201ENST00000341259 TMEM2Q9UHN6 1383 aa22.32■■□□□ 1.16
SH2B3-201ENST00000341259 ADCY5O95622 1261 aa22.32■■□□□ 1.16
SH2B3-201ENST00000341259 USP48Q86UV5 1035 aa22.32■■□□□ 1.16
SH2B3-201ENST00000341259 RNF113AO15541 343 aaKnown RBP22.32■■□□□ 1.16
SH2B3-201ENST00000341259 RDXP35241 583 aaKnown RBP22.32■■□□□ 1.16
SH2B3-201ENST00000341259 SETDB2Q96T68 719 aa22.32■■□□□ 1.16
SH2B3-201ENST00000341259 IQSEC3Q9UPP2 1182 aaPredicted RBP22.32■■□□□ 1.16
SH2B3-201ENST00000341259 ST5P78524 1137 aa22.31■■□□□ 1.16
SH2B3-201ENST00000341259 PTPN14Q15678 1187 aa22.31■■□□□ 1.16
SH2B3-201ENST00000341259 LRSAM1Q6UWE0 723 aa22.31■■□□□ 1.16
SH2B3-201ENST00000341259 ZBTB43O43298 467 aa22.31■■□□□ 1.16
SH2B3-201ENST00000341259 ORAI2Q96SN7 254 aa22.31■■□□□ 1.16
SH2B3-201ENST00000341259 GSTO1P78417 241 aa22.31■■□□□ 1.16
SH2B3-201ENST00000341259 CREB3L3Q68CJ9 461 aa22.31■■□□□ 1.16
SH2B3-201ENST00000341259 CNNM2Q9H8M5 875 aa22.31■■□□□ 1.16
SH2B3-201ENST00000341259 SEPT11Q9NVA2 429 aaKnown RBP22.31■■□□□ 1.16
SH2B3-201ENST00000341259 F13A1P00488 732 aa22.3■■□□□ 1.16
SH2B3-201ENST00000341259 AK2P54819 239 aa22.3■■□□□ 1.16
SH2B3-201ENST00000341259 SKIDA1Q1XH10 827 aa22.3■■□□□ 1.16
SH2B3-201ENST00000341259 ZSCAN12O43309 604 aa22.3■■□□□ 1.16
SH2B3-201ENST00000341259 ERLIN1O75477 346 aa22.3■■□□□ 1.16
SH2B3-201ENST00000341259 UVSSAQ2YD98 709 aa22.3■■□□□ 1.16
SH2B3-201ENST00000341259 CCDC12Q8WUD4 166 aaPredicted RBP22.3■■□□□ 1.16
SH2B3-201ENST00000341259 KIF2AO00139 706 aaPredicted RBP22.3■■□□□ 1.16
SH2B3-201ENST00000341259 ZNF790Q6PG37 636 aa22.3■■□□□ 1.16
SH2B3-201ENST00000341259 TSG101Q99816 390 aa22.3■■□□□ 1.16
SH2B3-201ENST00000341259 RNF123Q5XPI4 1314 aa22.3■■□□□ 1.16
SH2B3-201ENST00000341259 ARHGEF10O15013 1369 aa22.3■■□□□ 1.16
SH2B3-201ENST00000341259 PATL2C9JE40 543 aaKnown RBP22.3■■□□□ 1.16
SH2B3-201ENST00000341259 GIMAP6Q6P9H5 292 aa22.3■■□□□ 1.16
SH2B3-201ENST00000341259 IRS4O14654 1257 aaPredicted RBP22.29■■□□□ 1.16
SH2B3-201ENST00000341259 HOXB7P09629 217 aa22.29■■□□□ 1.16
SH2B3-201ENST00000341259 FKBP15Q5T1M5 1219 aa22.29■■□□□ 1.16
SH2B3-201ENST00000341259 LGR6Q9HBX8 967 aa22.29■■□□□ 1.16
SH2B3-201ENST00000341259 KDM5CP41229 1560 aa22.29■■□□□ 1.16
SH2B3-201ENST00000341259 ZNF165P49910 485 aa22.29■■□□□ 1.16
SH2B3-201ENST00000341259 OTUD7AQ8TE49 926 aaPredicted RBP22.29■■□□□ 1.16
SH2B3-201ENST00000341259 ALG1Q9BT22 464 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 USP19O94966 1318 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 TNIP1Q15025 636 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 RAB3GAP1Q15042 981 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 PANK2Q9BZ23 570 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 RAD50Q92878 1312 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 AXDND1Q5T1B0 1012 aaPredicted RBP22.28■■□□□ 1.16
SH2B3-201ENST00000341259 CNKSR2Q8WXI2 1034 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 CUL5Q93034 780 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 NLRP3Q96P20 1036 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 YEATS2Q9ULM3 1422 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 MAGI2Q86UL8 1455 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 PLEKHG3A1L390 1219 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 ESR2Q92731 530 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 VAT1LQ9HCJ6 419 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 TTC37Q6PGP7 1564 aa22.28■■□□□ 1.16
SH2B3-201ENST00000341259 IQCEQ6IPM2 695 aa22.27■■□□□ 1.16
SH2B3-201ENST00000341259 PRC1O43663 620 aa22.27■■□□□ 1.16
SH2B3-201ENST00000341259 TOM1O60784 492 aa22.27■■□□□ 1.15
SH2B3-201ENST00000341259 RBM25P49756 843 aaKnown RBP22.27■■□□□ 1.15
SH2B3-201ENST00000341259 HCLS1P14317 486 aaPredicted RBP22.26■■□□□ 1.15
SH2B3-201ENST00000341259 CCDC102BQ68D86 513 aa22.26■■□□□ 1.15
SH2B3-201ENST00000341259 TMTC2Q8N394 836 aa22.26■■□□□ 1.15
SH2B3-201ENST00000341259 ERLIN2O94905 339 aa22.26■■□□□ 1.15
SH2B3-201ENST00000341259 METTL22Q9BUU2 404 aaPredicted RBP22.26■■□□□ 1.15
SH2B3-201ENST00000341259 RTN1Q16799 776 aa22.26■■□□□ 1.15
SH2B3-201ENST00000341259 IFIT1BQ5T764 474 aaKnown RBP22.26■■□□□ 1.15
SH2B3-201ENST00000341259 NAA16Q6N069 864 aaPredicted RBP22.26■■□□□ 1.15
SH2B3-201ENST00000341259 RUFY3Q7L099 469 aa22.26■■□□□ 1.15
SH2B3-201ENST00000341259 KDM5DQ9BY66 1539 aa22.26■■□□□ 1.15
SH2B3-201ENST00000341259 PPP1R12BO60237 982 aaPredicted RBP22.25■■□□□ 1.15
SH2B3-201ENST00000341259 DNM1Q05193 864 aaKnown RBP22.25■■□□□ 1.15
SH2B3-201ENST00000341259 ZGPATQ8N5A5 531 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 214.3 ms