RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 DTNBO60941 627 aa12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 EIF5P55010 431 aaKnown RBP12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 CEP126Q9P2H0 1117 aa12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 NUP188Q5SRE5 1749 aa12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 ITGA6P23229 1130 aa12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 HELBQ8NG08 1087 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 A0A0D9SFI3 127 aa12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 A0A1B0GUL7 405 aa12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 IL15P40933 162 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 HSP90AB3PQ58FF7 597 aa12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 SUSD4Q5VX71 490 aa12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 LDHAL6AQ6ZMR3 332 aa12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 CHMP5Q9NZZ3 219 aa12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 NIP7Q9Y221 180 aaKnown RBP eCLIP12.22□□□□□ -0.45
ARHGEF3-202ENST00000338458 LRP6O75581 1613 aa12.21□□□□□ -0.45
ARHGEF3-202ENST00000338458 GOLIM4O00461 696 aa12.21□□□□□ -0.45
ARHGEF3-202ENST00000338458 PRPF40BQ6NWY9 871 aaKnown RBP12.21□□□□□ -0.45
ARHGEF3-202ENST00000338458 CNNM1Q9NRU3 951 aa12.21□□□□□ -0.45
ARHGEF3-202ENST00000338458 ADORA1P30542 326 aa12.21□□□□□ -0.46
ARHGEF3-202ENST00000338458 RASEFQ8IZ41 740 aa12.21□□□□□ -0.46
ARHGEF3-202ENST00000338458 SEC62Q99442 399 aaKnown RBP12.21□□□□□ -0.46
ARHGEF3-202ENST00000338458 AFF2P51816 1311 aa12.21□□□□□ -0.46
ARHGEF3-202ENST00000338458 FKBP4Q02790 459 aaKnown RBP eCLIP12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 TRIM28Q13263 835 aaKnown RBP12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 CCDC129Q6ZRS4 1044 aa12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 FNBP4Q8N3X1 1017 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 CCDC24Q8N4L8 307 aa12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 LINC00116Q8NCU8 138 aa12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 TTLL11Q8NHH1 800 aa12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 RUFY2Q8WXA3 655 aa12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 FOXD4L4Q8WXT5 416 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 LSG1Q9H089 658 aaKnown RBP12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 TUBGCP6Q96RT7 1819 aa12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 ZGPATQ8N5A5 531 aaKnown RBP12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 SNAP23O00161 211 aa12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 TJP1Q07157 1748 aa12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 METTL24Q5JXM2 366 aa12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 WNK3Q9BYP7 1800 aa12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 EP400Q96L91 3159 aa12.2□□□□□ -0.46
ARHGEF3-202ENST00000338458 SMARCC1Q92922 1105 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF3-202ENST00000338458 ATP5JP18859 108 aa12.19□□□□□ -0.46
ARHGEF3-202ENST00000338458 CTSWP56202 376 aa12.19□□□□□ -0.46
ARHGEF3-202ENST00000338458 ZNF589Q86UQ0 364 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF3-202ENST00000338458 RAD50Q92878 1312 aa12.19□□□□□ -0.46
ARHGEF3-202ENST00000338458 ANKRD18BA2A2Z9 1011 aa12.19□□□□□ -0.46
ARHGEF3-202ENST00000338458 DEKP35659 375 aaKnown RBP12.19□□□□□ -0.46
ARHGEF3-202ENST00000338458 SEC31BQ9NQW1 1179 aa12.19□□□□□ -0.46
ARHGEF3-202ENST00000338458 IFIT1P09914 478 aaKnown RBP12.18□□□□□ -0.46
ARHGEF3-202ENST00000338458 HSPA4P34932 840 aa12.18□□□□□ -0.46
ARHGEF3-202ENST00000338458 PI16Q6UXB8 463 aa12.18□□□□□ -0.46
ARHGEF3-202ENST00000338458 ZNF34Q8IZ26 560 aa12.18□□□□□ -0.46
ARHGEF3-202ENST00000338458 GJD4Q96KN9 370 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF3-202ENST00000338458 SNX14Q9Y5W7 946 aa12.18□□□□□ -0.46
ARHGEF3-202ENST00000338458 PHF14O94880 888 aa12.18□□□□□ -0.46
ARHGEF3-202ENST00000338458 CAMTA2O94983 1202 aa12.18□□□□□ -0.46
ARHGEF3-202ENST00000338458 MYH14Q7Z406 1995 aaKnown RBP12.18□□□□□ -0.46
ARHGEF3-202ENST00000338458 ERVV-1B6SEH8 477 aa12.18□□□□□ -0.46
ARHGEF3-202ENST00000338458 COL15A1P39059 1388 aa12.18□□□□□ -0.46
ARHGEF3-202ENST00000338458 GTF2E1P29083 439 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 XAGE2Q96GT9 111 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 TCEANC2Q96MN5 208 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 UTP14AQ9BVJ6 771 aaKnown RBP12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 SRP68Q9UHB9 627 aaKnown RBP12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 SPATA31A6Q5VVP1 1343 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 PDE8AO60658 829 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 CSF1RP07333 972 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 ADCK5Q3MIX3 580 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 TTC39AQ5SRH9 613 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 RBM8AQ9Y5S9 174 aaKnown RBP12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 SH3TC1Q8TE82 1336 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 NWD2Q9ULI1 1742 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 GNPATO15228 680 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 TAF5LO75529 589 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 CASTP20810 708 aaKnown RBP12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 SSFA2P28290 1259 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 PKP1Q13835 747 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 SEPT12Q8IYM1 358 aa12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF3-202ENST00000338458 NUP98P52948 1817 aa12.16□□□□□ -0.46
ARHGEF3-202ENST00000338458 TMX3Q96JJ7 454 aa12.16□□□□□ -0.46
ARHGEF3-202ENST00000338458 JAKMIP1Q96N16 626 aaKnown RBP12.16□□□□□ -0.46
ARHGEF3-202ENST00000338458 PAG1Q9NWQ8 432 aa12.16□□□□□ -0.46
ARHGEF3-202ENST00000338458 CCDC171Q6TFL3 1326 aa12.16□□□□□ -0.46
ARHGEF3-202ENST00000338458 COL9A3Q14050 684 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF3-202ENST00000338458 TAF6LQ9Y6J9 622 aa12.16□□□□□ -0.46
ARHGEF3-202ENST00000338458 SCARF1Q14162 830 aa12.16□□□□□ -0.46
ARHGEF3-202ENST00000338458 ATP2B3Q16720 1220 aa12.16□□□□□ -0.46
ARHGEF3-202ENST00000338458 TNPO1Q92973 898 aaKnown RBP12.16□□□□□ -0.46
ARHGEF3-202ENST00000338458 HAUS7Q99871 368 aa12.16□□□□□ -0.46
ARHGEF3-202ENST00000338458 GZF1Q9H116 711 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF3-202ENST00000338458 CCDC158Q5M9N0 1113 aa12.15□□□□□ -0.46
ARHGEF3-202ENST00000338458 USPL1Q5W0Q7 1092 aa12.15□□□□□ -0.46
ARHGEF3-202ENST00000338458 QTRT2Q9H974 415 aaKnown RBP12.15□□□□□ -0.46
ARHGEF3-202ENST00000338458 CDHR2Q9BYE9 1310 aa12.15□□□□□ -0.46
ARHGEF3-202ENST00000338458 CIAO1O76071 339 aa12.15□□□□□ -0.46
ARHGEF3-202ENST00000338458 AMIGO3Q86WK7 504 aa12.15□□□□□ -0.46
ARHGEF3-202ENST00000338458 PLA2G12BQ9BX93 195 aa12.15□□□□□ -0.46
ARHGEF3-202ENST00000338458 HIP1O00291 1037 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms