RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 GJD4Q96KN9 370 aaPredicted RBP15.1■□□□□ 0.01
ZNF548-201ENST00000336128 CCDC85AQ96PX6 553 aaPredicted RBP15.1■□□□□ 0.01
ZNF548-201ENST00000336128 PUS3Q9BZE2 481 aaKnown RBP15.1■□□□□ 0.01
ZNF548-201ENST00000336128 ATRNO75882 1429 aa15.1■□□□□ 0.01
ZNF548-201ENST00000336128 CTSWP56202 376 aa15.1■□□□□ 0.01
ZNF548-201ENST00000336128 NFKBIBQ15653 356 aa15.1■□□□□ 0.01
ZNF548-201ENST00000336128 PTF1AQ7RTS3 328 aa15.1■□□□□ 0.01
ZNF548-201ENST00000336128 FBXO3Q9UK99 471 aa15.1■□□□□ 0.01
ZNF548-201ENST00000336128 PALD1Q9ULE6 856 aa15.1■□□□□ 0.01
ZNF548-201ENST00000336128 BCORQ6W2J9 1755 aa15.09■□□□□ 0.01
ZNF548-201ENST00000336128 RAD50Q92878 1312 aa15.09■□□□□ 0.01
ZNF548-201ENST00000336128 HIP1O00291 1037 aa15.09■□□□□ 0.01
ZNF548-201ENST00000336128 ANAPC15P60006 121 aa15.09■□□□□ 0.01
ZNF548-201ENST00000336128 IFIT5Q13325 482 aaKnown RBP15.09■□□□□ 0.01
ZNF548-201ENST00000336128 TAF7LQ5H9L4 462 aa15.09■□□□□ 0.01
ZNF548-201ENST00000336128 FSD1Q9BTV5 496 aa15.09■□□□□ 0.01
ZNF548-201ENST00000336128 LSG1Q9H089 658 aaKnown RBP15.09■□□□□ 0.01
ZNF548-201ENST00000336128 MYH3P11055 1940 aa15.09■□□□□ 0.01
ZNF548-201ENST00000336128 TTLL11Q8NHH1 800 aa15.08■□□□□ 0.01
ZNF548-201ENST00000336128 PDE8AO60658 829 aa15.08■□□□□ 0
ZNF548-201ENST00000336128 KIAA1211Q6ZU35 1233 aa15.08■□□□□ 0
ZNF548-201ENST00000336128 IL17RAQ96F46 866 aa15.08■□□□□ 0
ZNF548-201ENST00000336128 NEUROD6Q96NK8 337 aa15.08■□□□□ 0
ZNF548-201ENST00000336128 ST18O60284 1047 aa15.07■□□□□ 0
ZNF548-201ENST00000336128 HSPA4P34932 840 aa15.07■□□□□ 0
ZNF548-201ENST00000336128 NMIQ13287 307 aaPredicted RBP15.07■□□□□ 0
ZNF548-201ENST00000336128 SUSD4Q5VX71 490 aa15.07■□□□□ 0
ZNF548-201ENST00000336128 GREM2Q9H772 168 aa15.07■□□□□ 0
ZNF548-201ENST00000336128 CEP126Q9P2H0 1117 aa15.07■□□□□ 0
ZNF548-201ENST00000336128 CNTNAP4Q9C0A0 1308 aa15.07■□□□□ 0
ZNF548-201ENST00000336128 FAM182BQ5T319 152 aa15.07■□□□□ 0
ZNF548-201ENST00000336128 EDC3Q96F86 508 aaKnown RBP15.07■□□□□ 0
ZNF548-201ENST00000336128 HAUS7Q99871 368 aa15.07■□□□□ 0
ZNF548-201ENST00000336128 CHMP5Q9NZZ3 219 aa15.07■□□□□ 0
ZNF548-201ENST00000336128 RIC1Q4ADV7 1423 aa15.06■□□□□ 0
ZNF548-201ENST00000336128 ANKRD18BA2A2Z9 1011 aa15.06■□□□□ 0
ZNF548-201ENST00000336128 ITGA6P23229 1130 aa15.06■□□□□ 0
ZNF548-201ENST00000336128 DDIT3P35638 169 aa15.06■□□□□ 0
ZNF548-201ENST00000336128 KCNQ4P56696 695 aa15.06■□□□□ 0
ZNF548-201ENST00000336128 TIMM10P62072 90 aa15.06■□□□□ 0
ZNF548-201ENST00000336128 PARP10Q53GL7 1025 aa15.06■□□□□ 0
ZNF548-201ENST00000336128 UTP14AQ9BVJ6 771 aaKnown RBP15.06■□□□□ 0
ZNF548-201ENST00000336128 TRPC5Q9UL62 973 aaPredicted RBP15.06■□□□□ 0
ZNF548-201ENST00000336128 SH3TC1Q8TE82 1336 aa15.06■□□□□ 0
ZNF548-201ENST00000336128 LRP5O75197 1615 aa15.06■□□□□ 0
ZNF548-201ENST00000336128 RFX7Q2KHR2 1363 aa15.06■□□□□ 0
ZNF548-201ENST00000336128 A0A1B0GUL7 405 aa15.05■□□□□ 0
ZNF548-201ENST00000336128 FAM227BQ96M60 508 aa15.05■□□□□ 0
ZNF548-201ENST00000336128 DNAJC2Q99543 621 aaKnown RBP15.05■□□□□ 0
ZNF548-201ENST00000336128 LAMB2P55268 1798 aa15.05■□□□□ -0
ZNF548-201ENST00000336128 AK7Q96M32 723 aa15.05■□□□□ -0
ZNF548-201ENST00000336128 ZNF652Q9Y2D9 606 aa15.05■□□□□ -0
ZNF548-201ENST00000336128 SCN7AQ01118 1682 aa15.04■□□□□ -0
ZNF548-201ENST00000336128 DDX60Q8IY21 1712 aaKnown RBP15.04■□□□□ -0
ZNF548-201ENST00000336128 FAM177BA6PVY3 158 aa15.04■□□□□ -0
ZNF548-201ENST00000336128 ONECUT3O60422 494 aaPredicted RBP15.04■□□□□ -0
ZNF548-201ENST00000336128 HSP90AA1P07900 732 aaKnown RBP15.04■□□□□ -0
ZNF548-201ENST00000336128 SNRKQ9NRH2 765 aa15.04■□□□□ -0
ZNF548-201ENST00000336128 FOXD4L1Q9NU39 408 aa15.04■□□□□ -0
ZNF548-201ENST00000336128 NIP7Q9Y221 180 aaKnown RBP eCLIP15.04■□□□□ -0
ZNF548-201ENST00000336128 AKAP2Q9Y2D5 859 aa15.04■□□□□ -0
ZNF548-201ENST00000336128 NDUFB9Q9Y6M9 179 aa15.04■□□□□ -0
ZNF548-201ENST00000336128 A0A0D9SFI3 127 aa15.04■□□□□ -0
ZNF548-201ENST00000336128 NEK4P51957 841 aa15.04■□□□□ -0
ZNF548-201ENST00000336128 PTH1RQ03431 593 aa15.04■□□□□ -0
ZNF548-201ENST00000336128 SBF2Q86WG5 1849 aa15.04■□□□□ -0
ZNF548-201ENST00000336128 MED23Q9ULK4 1368 aa15.03■□□□□ -0
ZNF548-201ENST00000336128 FRAT2O75474 233 aaPredicted RBP15.03■□□□□ -0
ZNF548-201ENST00000336128 NTSR2O95665 410 aa15.03■□□□□ -0
ZNF548-201ENST00000336128 HCLS1P14317 486 aaPredicted RBP15.03■□□□□ -0
ZNF548-201ENST00000336128 SEPT12Q8IYM1 358 aa15.03■□□□□ -0
ZNF548-201ENST00000336128 RIPOR2Q9Y4F9 1068 aa15.03■□□□□ -0
ZNF548-201ENST00000336128 SNX14Q9Y5W7 946 aa15.03■□□□□ -0
ZNF548-201ENST00000336128 LY75O60449 1722 aa15.03■□□□□ -0
ZNF548-201ENST00000336128 CCDC171Q6TFL3 1326 aa15.03■□□□□ -0
ZNF548-201ENST00000336128 METTL24Q5JXM2 366 aa15.02■□□□□ -0
ZNF548-201ENST00000336128 RC3H1Q5TC82 1133 aaKnown RBP15.02■□□□□ -0
ZNF548-201ENST00000336128 LDHAL6AQ6ZMR3 332 aa15.02■□□□□ -0
ZNF548-201ENST00000336128 CNNM1Q9NRU3 951 aa15.02■□□□□ -0
ZNF548-201ENST00000336128 CIZ1Q9ULV3 898 aaPredicted RBP15.02■□□□□ -0
ZNF548-201ENST00000336128 ADORA1P30542 326 aa15.02□□□□□ -0.01
ZNF548-201ENST00000336128 DDX46Q7L014 1031 aaKnown RBP15.02□□□□□ -0.01
ZNF548-201ENST00000336128 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.02□□□□□ -0.01
ZNF548-201ENST00000336128 CCNL1Q9UK58 526 aaPredicted RBP15.02□□□□□ -0.01
ZNF548-201ENST00000336128 SPEF2Q9C093 1822 aa15.02□□□□□ -0.01
ZNF548-201ENST00000336128 IFIT1P09914 478 aaKnown RBP15.01□□□□□ -0.01
ZNF548-201ENST00000336128 CLEC4GQ6UXB4 293 aa15.01□□□□□ -0.01
ZNF548-201ENST00000336128 XAGE2Q96GT9 111 aa15.01□□□□□ -0.01
ZNF548-201ENST00000336128 PAG1Q9NWQ8 432 aa15.01□□□□□ -0.01
ZNF548-201ENST00000336128 ATP2B3Q16720 1220 aa15.01□□□□□ -0.01
ZNF548-201ENST00000336128 RASEFQ8IZ41 740 aa15.01□□□□□ -0.01
ZNF548-201ENST00000336128 KBTBD3Q8NAB2 608 aa15.01□□□□□ -0.01
ZNF548-201ENST00000336128 GOLIM4O00461 696 aa15□□□□□ -0.01
ZNF548-201ENST00000336128 RPS6KA4O75676 772 aa15□□□□□ -0.01
ZNF548-201ENST00000336128 MCM2P49736 904 aa15□□□□□ -0.01
ZNF548-201ENST00000336128 TTC39AQ5SRH9 613 aa15□□□□□ -0.01
ZNF548-201ENST00000336128 GORABQ5T7V8 394 aa15□□□□□ -0.01
ZNF548-201ENST00000336128 UPF3BQ9BZI7 483 aaKnown RBP15□□□□□ -0.01
ZNF548-201ENST00000336128 RGL2O15211 777 aa14.99□□□□□ -0.01
ZNF548-201ENST00000336128 HSP90B1P14625 803 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms