RNA–Protein interactions for RNA: ENST00000336083.7

RAB6A-202, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB6A, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-202ENST00000336083 CHPF2Q9P2E5 772 aa14.58□□□□□ -0.08
RAB6A-202ENST00000336083 BMS1Q14692 1282 aaKnown RBP14.57□□□□□ -0.08
RAB6A-202ENST00000336083 DNAAF4Q8WXU2 420 aa14.57□□□□□ -0.08
RAB6A-202ENST00000336083 FMNL2Q96PY5 1086 aa14.57□□□□□ -0.08
RAB6A-202ENST00000336083 HTATSF1O43719 755 aaKnown RBP14.57□□□□□ -0.08
RAB6A-202ENST00000336083 SARM1Q6SZW1 724 aa14.57□□□□□ -0.08
RAB6A-202ENST00000336083 CCDC73Q6ZRK6 1079 aa14.57□□□□□ -0.08
RAB6A-202ENST00000336083 KCNB2Q92953 911 aa14.57□□□□□ -0.08
RAB6A-202ENST00000336083 KINO60870 393 aaKnown RBP14.57□□□□□ -0.08
RAB6A-202ENST00000336083 SMC2O95347 1197 aa14.57□□□□□ -0.08
RAB6A-202ENST00000336083 CLCN6P51797 869 aa14.57□□□□□ -0.08
RAB6A-202ENST00000336083 RESTQ13127 1097 aa14.57□□□□□ -0.08
RAB6A-202ENST00000336083 ARHGAP29Q52LW3 1261 aa14.57□□□□□ -0.08
RAB6A-202ENST00000336083 HOMER1Q86YM7 354 aa14.57□□□□□ -0.08
RAB6A-202ENST00000336083 GOLPH3LQ9H4A5 285 aa14.57□□□□□ -0.08
RAB6A-202ENST00000336083 C9orf78Q9NZ63 289 aaPredicted RBP14.57□□□□□ -0.08
RAB6A-202ENST00000336083 TSPOAP1O95153 1857 aa14.57□□□□□ -0.08
RAB6A-202ENST00000336083 SIL1Q9H173 461 aa14.56□□□□□ -0.08
RAB6A-202ENST00000336083 CFAP45Q9UL16 551 aa14.56□□□□□ -0.08
RAB6A-202ENST00000336083 CAVIN2O95810 425 aa14.56□□□□□ -0.08
RAB6A-202ENST00000336083 HNRNPH2P55795 449 aaKnown RBP14.56□□□□□ -0.08
RAB6A-202ENST00000336083 BEND3Q5T5X7 828 aa14.56□□□□□ -0.08
RAB6A-202ENST00000336083 ZNF589Q86UQ0 364 aaPredicted RBP14.56□□□□□ -0.08
RAB6A-202ENST00000336083 DHX40Q8IX18 779 aaKnown RBP14.56□□□□□ -0.08
RAB6A-202ENST00000336083 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.56□□□□□ -0.08
RAB6A-202ENST00000336083 XRN1Q8IZH2 1706 aaKnown RBP14.55□□□□□ -0.08
RAB6A-202ENST00000336083 PDIA4P13667 645 aaKnown RBP14.55□□□□□ -0.08
RAB6A-202ENST00000336083 NUTM2GQ5VZR2 741 aa14.55□□□□□ -0.08
RAB6A-202ENST00000336083 EDC3Q96F86 508 aaKnown RBP14.55□□□□□ -0.08
RAB6A-202ENST00000336083 NRKQ7Z2Y5 1582 aa14.55□□□□□ -0.08
RAB6A-202ENST00000336083 GUCY1B3Q02153 619 aa14.55□□□□□ -0.08
RAB6A-202ENST00000336083 TMC6Q7Z403 805 aa14.55□□□□□ -0.08
RAB6A-202ENST00000336083 USHBP1Q8N6Y0 703 aa14.55□□□□□ -0.08
RAB6A-202ENST00000336083 FAM53CQ9NYF3 392 aa14.55□□□□□ -0.08
RAB6A-202ENST00000336083 TLR7Q9NYK1 1049 aaKnown RBP14.55□□□□□ -0.08
RAB6A-202ENST00000336083 CAPN2P17655 700 aa14.55□□□□□ -0.08
RAB6A-202ENST00000336083 ME1P48163 572 aa14.55□□□□□ -0.08
RAB6A-202ENST00000336083 SLFNL1Q499Z3 407 aa14.55□□□□□ -0.08
RAB6A-202ENST00000336083 E4F1Q66K89 784 aaPredicted RBP14.55□□□□□ -0.08
RAB6A-202ENST00000336083 CEP57L1Q8IYX8 460 aa14.55□□□□□ -0.08
RAB6A-202ENST00000336083 ANO10Q9NW15 660 aa14.55□□□□□ -0.08
RAB6A-202ENST00000336083 NEK11Q8NG66 645 aa14.54□□□□□ -0.08
RAB6A-202ENST00000336083 PPP1R13BQ96KQ4 1090 aa14.54□□□□□ -0.08
RAB6A-202ENST00000336083 FHOD1Q9Y613 1164 aa14.54□□□□□ -0.08
RAB6A-202ENST00000336083 USP42Q9H9J4 1324 aaKnown RBP14.54□□□□□ -0.08
RAB6A-202ENST00000336083 SDF4Q9BRK5 362 aa14.54□□□□□ -0.08
RAB6A-202ENST00000336083 PNMA6AP0CW24 399 aaPredicted RBP14.53□□□□□ -0.08
RAB6A-202ENST00000336083 Q6ZUG5 572 aa14.53□□□□□ -0.08
RAB6A-202ENST00000336083 FSIP1Q8NA03 581 aa14.53□□□□□ -0.08
RAB6A-202ENST00000336083 EAF2Q96CJ1 260 aaPredicted RBP14.53□□□□□ -0.08
RAB6A-202ENST00000336083 PEAK1Q9H792 1746 aa14.53□□□□□ -0.08
RAB6A-202ENST00000336083 ADCY9O60503 1353 aa14.53□□□□□ -0.08
RAB6A-202ENST00000336083 H2AFXP16104 143 aaPredicted RBP14.53□□□□□ -0.08
RAB6A-202ENST00000336083 CYP2C19P33261 490 aa14.53□□□□□ -0.08
RAB6A-202ENST00000336083 ZRSR1Q15695 479 aaKnown RBP14.53□□□□□ -0.08
RAB6A-202ENST00000336083 USP28Q96RU2 1077 aa14.53□□□□□ -0.08
RAB6A-202ENST00000336083 TRIM34Q9BYJ4 488 aa14.53□□□□□ -0.08
RAB6A-202ENST00000336083 DNAI1Q9UI46 699 aa14.53□□□□□ -0.08
RAB6A-202ENST00000336083 OVOS2A0A0J9YW53 1432 aa14.53□□□□□ -0.08
RAB6A-202ENST00000336083 OVOS2Q6IE36 1432 aa14.53□□□□□ -0.08
RAB6A-202ENST00000336083 CEP170BQ9Y4F5 1589 aaPredicted RBP14.53□□□□□ -0.08
RAB6A-202ENST00000336083 C3P01024 1663 aa14.52□□□□□ -0.08
RAB6A-202ENST00000336083 BIN1O00499 593 aa14.52□□□□□ -0.08
RAB6A-202ENST00000336083 CWF19L2Q2TBE0 894 aaKnown RBP14.52□□□□□ -0.08
RAB6A-202ENST00000336083 IFNKQ9P0W0 207 aa14.52□□□□□ -0.08
RAB6A-202ENST00000336083 NDUFB9Q9Y6M9 179 aa14.52□□□□□ -0.08
RAB6A-202ENST00000336083 KIF2AO00139 706 aaPredicted RBP14.52□□□□□ -0.08
RAB6A-202ENST00000336083 CTAGE5O15320 804 aa14.52□□□□□ -0.08
RAB6A-202ENST00000336083 KCNQ3O43525 872 aa14.52□□□□□ -0.08
RAB6A-202ENST00000336083 SEC31AO94979 1220 aaKnown RBP14.52□□□□□ -0.08
RAB6A-202ENST00000336083 SFPQP23246 707 aaKnown RBP eCLIP14.52□□□□□ -0.08
RAB6A-202ENST00000336083 GSDMDP57764 484 aa14.52□□□□□ -0.08
RAB6A-202ENST00000336083 NBPF11Q86T75 865 aa14.52□□□□□ -0.08
RAB6A-202ENST00000336083 UBXN4Q92575 508 aa14.52□□□□□ -0.08
RAB6A-202ENST00000336083 XPO4Q9C0E2 1151 aaKnown RBP14.52□□□□□ -0.08
RAB6A-202ENST00000336083 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.52□□□□□ -0.08
RAB6A-202ENST00000336083 MON2Q7Z3U7 1717 aa14.52□□□□□ -0.08
RAB6A-202ENST00000336083 NEO1Q92859 1461 aa14.52□□□□□ -0.09
RAB6A-202ENST00000336083 IGSF1Q8N6C5 1336 aa14.52□□□□□ -0.09
RAB6A-202ENST00000336083 FLT4P35916 1363 aa14.52□□□□□ -0.09
RAB6A-202ENST00000336083 CHGBP05060 677 aa14.52□□□□□ -0.09
RAB6A-202ENST00000336083 PLA2G4AP47712 749 aa14.52□□□□□ -0.09
RAB6A-202ENST00000336083 TMCO3Q6UWJ1 677 aa14.52□□□□□ -0.09
RAB6A-202ENST00000336083 FAM177A1Q8N128 213 aaPredicted RBP14.52□□□□□ -0.09
RAB6A-202ENST00000336083 HIP1O00291 1037 aa14.51□□□□□ -0.09
RAB6A-202ENST00000336083 KLHDC4Q8TBB5 520 aa14.51□□□□□ -0.09
RAB6A-202ENST00000336083 ZBTB9Q96C00 473 aa14.51□□□□□ -0.09
RAB6A-202ENST00000336083 NEK1Q96PY6 1258 aa14.51□□□□□ -0.09
RAB6A-202ENST00000336083 DNAJC2Q99543 621 aaKnown RBP14.51□□□□□ -0.09
RAB6A-202ENST00000336083 EPC1Q9H2F5 836 aa14.51□□□□□ -0.09
RAB6A-202ENST00000336083 ZSCAN16Q9H4T2 348 aaPredicted RBP14.51□□□□□ -0.09
RAB6A-202ENST00000336083 FAM208AQ9UK61 1670 aaKnown RBP14.51□□□□□ -0.09
RAB6A-202ENST00000336083 CCT2P78371 535 aaKnown RBP14.51□□□□□ -0.09
RAB6A-202ENST00000336083 G3BP1Q13283 466 aaKnown RBP eCLIP14.51□□□□□ -0.09
RAB6A-202ENST00000336083 ARMCX5Q6P1M9 558 aa14.51□□□□□ -0.09
RAB6A-202ENST00000336083 CCDC129Q6ZRS4 1044 aa14.51□□□□□ -0.09
RAB6A-202ENST00000336083 MNS1Q8NEH6 495 aa14.51□□□□□ -0.09
RAB6A-202ENST00000336083 SCRN1Q12765 414 aa14.5□□□□□ -0.09
RAB6A-202ENST00000336083 ISM2Q6H9L7 571 aa14.5□□□□□ -0.09
RAB6A-202ENST00000336083 CHMP4AQ9BY43 222 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms