RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 MED23Q9ULK4 1368 aa8.29□□□□□ -1.08
USP16-201ENST00000334352 DDX58O95786 925 aaKnown RBP8.29□□□□□ -1.08
USP16-201ENST00000334352 PROSER3Q2NL68 480 aa8.29□□□□□ -1.08
USP16-201ENST00000334352 NOM1Q5C9Z4 860 aaKnown RBP8.29□□□□□ -1.08
USP16-201ENST00000334352 NIM1KQ8IY84 436 aa8.29□□□□□ -1.08
USP16-201ENST00000334352 MAP2K2P36507 400 aa8.28□□□□□ -1.08
USP16-201ENST00000334352 DDX46Q7L014 1031 aaKnown RBP8.28□□□□□ -1.08
USP16-201ENST00000334352 ZNF428Q96B54 188 aa8.28□□□□□ -1.08
USP16-201ENST00000334352 SAGE1Q9NXZ1 904 aa8.28□□□□□ -1.08
USP16-201ENST00000334352 PDE8AO60658 829 aa8.28□□□□□ -1.08
USP16-201ENST00000334352 VIL1P09327 827 aaKnown RBP8.28□□□□□ -1.08
USP16-201ENST00000334352 HDGFL1Q5TGJ6 251 aa8.28□□□□□ -1.08
USP16-201ENST00000334352 C3orf67Q6ZVT6 689 aa8.28□□□□□ -1.08
USP16-201ENST00000334352 AGBL3Q8NEM8 1001 aa8.28□□□□□ -1.08
USP16-201ENST00000334352 TMX4Q9H1E5 349 aaPredicted RBP8.28□□□□□ -1.08
USP16-201ENST00000334352 MIS18AQ9NYP9 233 aa8.28□□□□□ -1.08
USP16-201ENST00000334352 RBBP6Q7Z6E9 1792 aaKnown RBP8.27□□□□□ -1.08
USP16-201ENST00000334352 UTYO14607 1347 aa8.27□□□□□ -1.08
USP16-201ENST00000334352 ZNF521Q96K83 1311 aa8.27□□□□□ -1.08
USP16-201ENST00000334352 IRS2Q9Y4H2 1338 aa8.27□□□□□ -1.08
USP16-201ENST00000334352 H7C1W4 665 aa8.27□□□□□ -1.08
USP16-201ENST00000334352 DDNO94850 711 aaPredicted RBP8.27□□□□□ -1.08
USP16-201ENST00000334352 FKBP1BP68106 108 aa8.27□□□□□ -1.08
USP16-201ENST00000334352 KSR2Q6VAB6 950 aa8.27□□□□□ -1.08
USP16-201ENST00000334352 MPNDQ8N594 471 aa8.27□□□□□ -1.08
USP16-201ENST00000334352 CFHR5Q9BXR6 569 aa8.27□□□□□ -1.08
USP16-201ENST00000334352 SPEF2Q9C093 1822 aa8.27□□□□□ -1.09
USP16-201ENST00000334352 CSF1RP07333 972 aa8.27□□□□□ -1.09
USP16-201ENST00000334352 CASP7P55210 303 aa8.27□□□□□ -1.09
USP16-201ENST00000334352 WBP1LQ9NX94 342 aa8.27□□□□□ -1.09
USP16-201ENST00000334352 CHPF2Q9P2E5 772 aa8.27□□□□□ -1.09
USP16-201ENST00000334352 MYO3BQ8WXR4 1341 aa8.27□□□□□ -1.09
USP16-201ENST00000334352 ATP2B4P23634 1241 aa8.27□□□□□ -1.09
USP16-201ENST00000334352 LMOD1P29536 600 aaPredicted RBP8.27□□□□□ -1.09
USP16-201ENST00000334352 ECE1P42892 770 aa8.27□□□□□ -1.09
USP16-201ENST00000334352 ZNF277Q9NRM2 450 aaPredicted RBP8.27□□□□□ -1.09
USP16-201ENST00000334352 RRP7AQ9Y3A4 280 aaKnown RBP8.27□□□□□ -1.09
USP16-201ENST00000334352 KIF16BQ96L93 1317 aa8.26□□□□□ -1.09
USP16-201ENST00000334352 GOLGA2Q08379 1002 aa8.26□□□□□ -1.09
USP16-201ENST00000334352 CIAPIN1Q6FI81 312 aa8.26□□□□□ -1.09
USP16-201ENST00000334352 MTMR14Q8NCE2 650 aa8.26□□□□□ -1.09
USP16-201ENST00000334352 GMLQ99445 158 aa8.26□□□□□ -1.09
USP16-201ENST00000334352 THUMPD2Q9BTF0 503 aaKnown RBP8.26□□□□□ -1.09
USP16-201ENST00000334352 ZBTB3Q9H5J0 574 aa8.26□□□□□ -1.09
USP16-201ENST00000334352 BRPF1P55201 1214 aaPredicted RBP8.26□□□□□ -1.09
USP16-201ENST00000334352 MAP2K1Q02750 393 aaPredicted RBP8.26□□□□□ -1.09
USP16-201ENST00000334352 CCDC152Q4G0S7 254 aa8.26□□□□□ -1.09
USP16-201ENST00000334352 CWC25Q9NXE8 425 aaPredicted RBP8.26□□□□□ -1.09
USP16-201ENST00000334352 SCN9AQ15858 1988 aa8.25□□□□□ -1.09
USP16-201ENST00000334352 MYL6BP14649 208 aa8.25□□□□□ -1.09
USP16-201ENST00000334352 GTF2E1P29083 439 aaPredicted RBP8.25□□□□□ -1.09
USP16-201ENST00000334352 CTCFP49711 727 aaPredicted RBP8.25□□□□□ -1.09
USP16-201ENST00000334352 DPP8Q6V1X1 898 aaPredicted RBP8.25□□□□□ -1.09
USP16-201ENST00000334352 ZNF526Q8TF50 670 aaPredicted RBP8.25□□□□□ -1.09
USP16-201ENST00000334352 BSDC1Q9NW68 430 aaPredicted RBP8.25□□□□□ -1.09
USP16-201ENST00000334352 TRMT112Q9UI30 125 aaKnown RBP8.25□□□□□ -1.09
USP16-201ENST00000334352 LEMD3Q9Y2U8 911 aa8.25□□□□□ -1.09
USP16-201ENST00000334352 CXCL9Q07325 125 aa8.25□□□□□ -1.09
USP16-201ENST00000334352 NUTM1Q86Y26 1132 aa8.25□□□□□ -1.09
USP16-201ENST00000334352 WWC1Q8IX03 1113 aa8.25□□□□□ -1.09
USP16-201ENST00000334352 CNTROBQ8N137 903 aa8.25□□□□□ -1.09
USP16-201ENST00000334352 ZBED3Q96IU2 234 aaPredicted RBP8.25□□□□□ -1.09
USP16-201ENST00000334352 CT47B1P0C2W7 299 aaPredicted RBP8.24□□□□□ -1.09
USP16-201ENST00000334352 LARGE2Q8N3Y3 721 aa8.24□□□□□ -1.09
USP16-201ENST00000334352 XDHP47989 1333 aa8.24□□□□□ -1.09
USP16-201ENST00000334352 NPHP1O15259 732 aa8.24□□□□□ -1.09
USP16-201ENST00000334352 RGS19P49795 217 aa8.24□□□□□ -1.09
USP16-201ENST00000334352 RPS8P62241 208 aaKnown RBP8.24□□□□□ -1.09
USP16-201ENST00000334352 DDX10Q13206 875 aaKnown RBP8.24□□□□□ -1.09
USP16-201ENST00000334352 IRS4O14654 1257 aaPredicted RBP8.24□□□□□ -1.09
USP16-201ENST00000334352 PODNQ7Z5L7 613 aa8.24□□□□□ -1.09
USP16-201ENST00000334352 TBC1D16Q8TBP0 767 aa8.24□□□□□ -1.09
USP16-201ENST00000334352 YDJCA8MPS7 323 aa8.23□□□□□ -1.09
USP16-201ENST00000334352 PPIP5K2O43314 1243 aa8.23□□□□□ -1.09
USP16-201ENST00000334352 PIP4K2AP48426 406 aaPredicted RBP8.23□□□□□ -1.09
USP16-201ENST00000334352 ANKRD2Q9GZV1 360 aa8.23□□□□□ -1.09
USP16-201ENST00000334352 WDR33Q9C0J8 1336 aaKnown RBP8.23□□□□□ -1.09
USP16-201ENST00000334352 IGSF3O75054 1194 aa8.23□□□□□ -1.09
USP16-201ENST00000334352 ALDH1L1O75891 902 aa8.23□□□□□ -1.09
USP16-201ENST00000334352 CDC5LQ99459 802 aaKnown RBP8.23□□□□□ -1.09
USP16-201ENST00000334352 PPP2R3BQ9Y5P8 575 aa8.23□□□□□ -1.09
USP16-201ENST00000334352 HSPA1AP0DMV8 641 aaKnown RBP8.22□□□□□ -1.09
USP16-201ENST00000334352 HSPA1BP0DMV9 641 aaKnown RBP8.22□□□□□ -1.09
USP16-201ENST00000334352 CTSWP56202 376 aa8.22□□□□□ -1.09
USP16-201ENST00000334352 GPSM2P81274 684 aa8.22□□□□□ -1.09
USP16-201ENST00000334352 DEFB115Q30KQ5 88 aa8.22□□□□□ -1.09
USP16-201ENST00000334352 CDC37L1Q7L3B6 337 aa8.22□□□□□ -1.09
USP16-201ENST00000334352 NEURL1BA8MQ27 555 aa8.22□□□□□ -1.09
USP16-201ENST00000334352 APAF1O14727 1248 aa8.22□□□□□ -1.09
USP16-201ENST00000334352 GPTP24298 496 aa8.22□□□□□ -1.09
USP16-201ENST00000334352 C8orf58Q8NAV2 365 aa8.22□□□□□ -1.09
USP16-201ENST00000334352 LINS1Q8NG48 757 aa8.22□□□□□ -1.09
USP16-201ENST00000334352 MRIQ9BWK5 157 aa8.22□□□□□ -1.09
USP16-201ENST00000334352 COA1Q9GZY4 146 aa8.22□□□□□ -1.09
USP16-201ENST00000334352 MYH16Q9H6N6 1097 aa8.22□□□□□ -1.09
USP16-201ENST00000334352 IGKV5-2P06315 115 aa8.21□□□□□ -1.09
USP16-201ENST00000334352 HSPA8P11142 646 aaKnown RBP8.21□□□□□ -1.09
USP16-201ENST00000334352 VEGFBP49765 207 aa8.21□□□□□ -1.09
USP16-201ENST00000334352 TRMT2AQ8IZ69 625 aaKnown RBP8.21□□□□□ -1.09
USP16-201ENST00000334352 POLLQ9UGP5 575 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms