RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 EP400Q96L91 3159 aa10.82□□□□□ -0.68
COPB2-201ENST00000333188 GOLGA6L3A6NEY3 463 aa10.82□□□□□ -0.68
COPB2-201ENST00000333188 VPS53Q5VIR6 699 aa10.82□□□□□ -0.68
COPB2-201ENST00000333188 MTMR7Q9Y216 660 aa10.82□□□□□ -0.68
COPB2-201ENST00000333188 CRKLP46109 303 aaKnown RBP10.82□□□□□ -0.68
COPB2-201ENST00000333188 GUCY1B3Q02153 619 aa10.82□□□□□ -0.68
COPB2-201ENST00000333188 TTLL5Q6EMB2 1281 aa10.82□□□□□ -0.68
COPB2-201ENST00000333188 PANK2Q9BZ23 570 aa10.82□□□□□ -0.68
COPB2-201ENST00000333188 OSBPL3Q9H4L5 887 aa10.82□□□□□ -0.68
COPB2-201ENST00000333188 USP21Q9UK80 565 aa10.82□□□□□ -0.68
COPB2-201ENST00000333188 EYA2O00167 538 aa10.81□□□□□ -0.68
COPB2-201ENST00000333188 CCDC191Q8NCU4 936 aa10.81□□□□□ -0.68
COPB2-201ENST00000333188 A0A0G2JLW4 131 aa10.81□□□□□ -0.68
COPB2-201ENST00000333188 ANKRD18BA2A2Z9 1011 aa10.81□□□□□ -0.68
COPB2-201ENST00000333188 BLOC1S2Q6QNY1 142 aa10.81□□□□□ -0.68
COPB2-201ENST00000333188 STAP2Q9UGK3 403 aa10.81□□□□□ -0.68
COPB2-201ENST00000333188 CCDC82Q8N4S0 544 aa10.8□□□□□ -0.68
COPB2-201ENST00000333188 SNX21Q969T3 373 aa10.8□□□□□ -0.68
COPB2-201ENST00000333188 SRP68Q9UHB9 627 aaKnown RBP10.8□□□□□ -0.68
COPB2-201ENST00000333188 GNPATO15228 680 aa10.8□□□□□ -0.68
COPB2-201ENST00000333188 BAG4O95429 457 aaKnown RBP10.8□□□□□ -0.68
COPB2-201ENST00000333188 CREB3L3Q68CJ9 461 aa10.8□□□□□ -0.68
COPB2-201ENST00000333188 XAGE2Q96GT9 111 aa10.8□□□□□ -0.68
COPB2-201ENST00000333188 PAG1Q9NWQ8 432 aa10.8□□□□□ -0.68
COPB2-201ENST00000333188 WTIPA6NIX2 430 aaPredicted RBP10.8□□□□□ -0.68
COPB2-201ENST00000333188 DDX11L8A8MPP1 907 aa10.8□□□□□ -0.68
COPB2-201ENST00000333188 LARGE1O95461 756 aa10.8□□□□□ -0.68
COPB2-201ENST00000333188 ZAP70P43403 619 aa10.8□□□□□ -0.68
COPB2-201ENST00000333188 ATP2B3Q16720 1220 aa10.8□□□□□ -0.68
COPB2-201ENST00000333188 CCDC144CPQ8IYA2 1237 aa10.8□□□□□ -0.68
COPB2-201ENST00000333188 FBXW7Q969H0 707 aa10.8□□□□□ -0.68
COPB2-201ENST00000333188 FOXO4P98177 505 aa10.79□□□□□ -0.68
COPB2-201ENST00000333188 CHAF1AQ13111 956 aaPredicted RBP10.79□□□□□ -0.68
COPB2-201ENST00000333188 SCARF1Q14162 830 aa10.79□□□□□ -0.68
COPB2-201ENST00000333188 RNF20Q5VTR2 975 aa10.79□□□□□ -0.68
COPB2-201ENST00000333188 EIF5BO60841 1220 aaKnown RBP10.79□□□□□ -0.68
COPB2-201ENST00000333188 RGPD5Q99666 1765 aa10.79□□□□□ -0.68
COPB2-201ENST00000333188 COL5A2P05997 1499 aaPredicted RBP10.79□□□□□ -0.68
COPB2-201ENST00000333188 TTC41PQ6P2S7 1318 aa10.79□□□□□ -0.68
COPB2-201ENST00000333188 CYP19A1P11511 503 aaPredicted RBP10.79□□□□□ -0.68
COPB2-201ENST00000333188 RXRAP19793 462 aa10.79□□□□□ -0.68
COPB2-201ENST00000333188 IL15P40933 162 aaPredicted RBP10.79□□□□□ -0.68
COPB2-201ENST00000333188 NUCB2P80303 420 aa10.79□□□□□ -0.68
COPB2-201ENST00000333188 NLRP10Q86W26 655 aa10.79□□□□□ -0.68
COPB2-201ENST00000333188 MIGA1Q8NAN2 632 aa10.79□□□□□ -0.68
COPB2-201ENST00000333188 LSG1Q9H089 658 aaKnown RBP10.79□□□□□ -0.68
COPB2-201ENST00000333188 ZNF219Q9P2Y4 722 aaPredicted RBP10.79□□□□□ -0.68
COPB2-201ENST00000333188 TFIP11Q9UBB9 837 aaKnown RBP10.79□□□□□ -0.68
COPB2-201ENST00000333188 CCDC171Q6TFL3 1326 aa10.78□□□□□ -0.68
COPB2-201ENST00000333188 ITPK1Q13572 414 aa10.78□□□□□ -0.68
COPB2-201ENST00000333188 SUSD4Q5VX71 490 aa10.78□□□□□ -0.68
COPB2-201ENST00000333188 BRF1Q92994 677 aa10.78□□□□□ -0.68
COPB2-201ENST00000333188 TEX13AQ9BXU3 409 aaPredicted RBP10.78□□□□□ -0.68
COPB2-201ENST00000333188 COPRSQ9NQ92 184 aa10.78□□□□□ -0.68
COPB2-201ENST00000333188 H7C1W4 665 aa10.78□□□□□ -0.68
COPB2-201ENST00000333188 SLC9C2Q5TAH2 1124 aa10.78□□□□□ -0.68
COPB2-201ENST00000333188 GIGYF2Q6Y7W6 1299 aaKnown RBP10.78□□□□□ -0.68
COPB2-201ENST00000333188 CCDC87Q9NVE4 849 aa10.78□□□□□ -0.68
COPB2-201ENST00000333188 HSPA4P34932 840 aa10.77□□□□□ -0.68
COPB2-201ENST00000333188 MAP3K15Q6ZN16 1313 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 RAD50Q92878 1312 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 FAM184AQ8NB25 1140 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 GOLGA6L4A6NEF3 574 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 H3BQV1 296 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 SLC27A2O14975 620 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 ZPR1O75312 459 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 GJB2P29033 226 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 RAB3GAP1Q15042 981 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 IFFO2Q5TF58 517 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 LARP1BQ659C4 914 aaKnown RBP10.77□□□□□ -0.69
COPB2-201ENST00000333188 LRP10Q7Z4F1 713 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 NCOA5Q9HCD5 579 aaKnown RBP10.77□□□□□ -0.69
COPB2-201ENST00000333188 LRP2BPQ9P2M1 347 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 LIMCH1Q9UPQ0 1083 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 NCAPD2Q15021 1401 aa10.77□□□□□ -0.69
COPB2-201ENST00000333188 CPDO75976 1380 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 SALL3Q9BXA9 1300 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 PHKA1P46020 1223 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 MTX1Q13505 466 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 ZBTB38Q8NAP3 1195 aaPredicted RBP10.76□□□□□ -0.69
COPB2-201ENST00000333188 PIBF1Q8WXW3 757 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 GPHNQ9NQX3 736 aaPredicted RBP10.76□□□□□ -0.69
COPB2-201ENST00000333188 OVOS2A0A0G2JMS6 1433 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 RFX5P48382 616 aaPredicted RBP10.76□□□□□ -0.69
COPB2-201ENST00000333188 RUFY3Q7L099 469 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 ATG9AQ7Z3C6 839 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 UTP14AQ9BVJ6 771 aaKnown RBP10.76□□□□□ -0.69
COPB2-201ENST00000333188 INCENPQ9NQS7 918 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 IGHMBP2P38935 993 aaKnown RBP10.76□□□□□ -0.69
COPB2-201ENST00000333188 BCAMP50895 628 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 MCMDC2Q4G0Z9 681 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 USPL1Q5W0Q7 1092 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 NBPF5PQ86XG9 351 aaPredicted RBP10.76□□□□□ -0.69
COPB2-201ENST00000333188 TTLL11Q8NHH1 800 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 RAI14Q9P0K7 980 aa10.76□□□□□ -0.69
COPB2-201ENST00000333188 CCNL1Q9UK58 526 aaPredicted RBP10.76□□□□□ -0.69
COPB2-201ENST00000333188 ANP32BQ92688 251 aaKnown RBP10.75□□□□□ -0.69
COPB2-201ENST00000333188 TFCP2L1Q9NZI6 479 aa10.75□□□□□ -0.69
COPB2-201ENST00000333188 SYCE3A1L190 88 aa10.75□□□□□ -0.69
COPB2-201ENST00000333188 MINDY4BA8MYZ0 360 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms