RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 RAPGEF4Q8WZA2 1011 aa10.26□□□□□ -0.77
LIMK2-201ENST00000331728 EAF2Q96CJ1 260 aaPredicted RBP10.26□□□□□ -0.77
LIMK2-201ENST00000331728 MYD88Q99836 296 aa10.26□□□□□ -0.77
LIMK2-201ENST00000331728 SDF4Q9BRK5 362 aa10.26□□□□□ -0.77
LIMK2-201ENST00000331728 OGFRQ9NZT2 677 aa10.26□□□□□ -0.77
LIMK2-201ENST00000331728 KCNA6P17658 529 aa10.26□□□□□ -0.77
LIMK2-201ENST00000331728 ME1P48163 572 aa10.26□□□□□ -0.77
LIMK2-201ENST00000331728 RBM33Q96EV2 1170 aaKnown RBP10.26□□□□□ -0.77
LIMK2-201ENST00000331728 ZNF396Q96N95 335 aaPredicted RBP10.26□□□□□ -0.77
LIMK2-201ENST00000331728 U3KPZ7 1027 aaPredicted RBP10.26□□□□□ -0.77
LIMK2-201ENST00000331728 AKAP12Q02952 1782 aa10.26□□□□□ -0.77
LIMK2-201ENST00000331728 A0A0U1RQG5 324 aaPredicted RBP10.26□□□□□ -0.77
LIMK2-201ENST00000331728 NECTIN1Q15223 517 aa10.26□□□□□ -0.77
LIMK2-201ENST00000331728 LRRC2Q9BYS8 371 aa10.26□□□□□ -0.77
LIMK2-201ENST00000331728 CLSTN2Q9H4D0 955 aa10.26□□□□□ -0.77
LIMK2-201ENST00000331728 RNMTO43148 476 aaKnown RBP10.25□□□□□ -0.77
LIMK2-201ENST00000331728 SYCP1Q15431 976 aa10.25□□□□□ -0.77
LIMK2-201ENST00000331728 GORABQ5T7V8 394 aa10.25□□□□□ -0.77
LIMK2-201ENST00000331728 KLHDC4Q8TBB5 520 aa10.25□□□□□ -0.77
LIMK2-201ENST00000331728 MAP4K1Q92918 833 aa10.25□□□□□ -0.77
LIMK2-201ENST00000331728 CHMP4CQ96CF2 233 aa10.25□□□□□ -0.77
LIMK2-201ENST00000331728 MRVI1Q9Y6F6 885 aa10.25□□□□□ -0.77
LIMK2-201ENST00000331728 NCBP1Q09161 790 aaKnown RBP10.25□□□□□ -0.77
LIMK2-201ENST00000331728 PROSER3Q2NL68 480 aa10.25□□□□□ -0.77
LIMK2-201ENST00000331728 NAT10Q9H0A0 1025 aaKnown RBP10.25□□□□□ -0.77
LIMK2-201ENST00000331728 CGNQ9P2M7 1197 aaKnown RBP10.25□□□□□ -0.77
LIMK2-201ENST00000331728 Q6ZUG5 572 aa10.25□□□□□ -0.77
LIMK2-201ENST00000331728 CEP57L1Q8IYX8 460 aa10.25□□□□□ -0.77
LIMK2-201ENST00000331728 NLRP2Q9NX02 1062 aa10.25□□□□□ -0.77
LIMK2-201ENST00000331728 PAXBP1Q9Y5B6 917 aa10.25□□□□□ -0.77
LIMK2-201ENST00000331728 PTPRUQ92729 1446 aa10.24□□□□□ -0.77
LIMK2-201ENST00000331728 ELP1O95163 1332 aa10.24□□□□□ -0.77
LIMK2-201ENST00000331728 JAK2O60674 1132 aa10.24□□□□□ -0.77
LIMK2-201ENST00000331728 CAVIN2O95810 425 aa10.24□□□□□ -0.77
LIMK2-201ENST00000331728 ZNF75DP51815 510 aa10.24□□□□□ -0.77
LIMK2-201ENST00000331728 LRMPQ12912 555 aa10.24□□□□□ -0.77
LIMK2-201ENST00000331728 ZSCAN16Q9H4T2 348 aaPredicted RBP10.24□□□□□ -0.77
LIMK2-201ENST00000331728 XRN1Q8IZH2 1706 aaKnown RBP10.24□□□□□ -0.77
LIMK2-201ENST00000331728 USP42Q9H9J4 1324 aaKnown RBP10.24□□□□□ -0.77
LIMK2-201ENST00000331728 MTX1Q13505 466 aa10.24□□□□□ -0.77
LIMK2-201ENST00000331728 GNL2Q13823 731 aaKnown RBP10.24□□□□□ -0.77
LIMK2-201ENST00000331728 STX1AQ16623 288 aa10.24□□□□□ -0.77
LIMK2-201ENST00000331728 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.24□□□□□ -0.77
LIMK2-201ENST00000331728 TLR7Q9NYK1 1049 aaKnown RBP10.24□□□□□ -0.77
LIMK2-201ENST00000331728 CTAGE5O15320 804 aa10.23□□□□□ -0.77
LIMK2-201ENST00000331728 IGSF3O75054 1194 aa10.23□□□□□ -0.77
LIMK2-201ENST00000331728 GUCY1B3Q02153 619 aa10.23□□□□□ -0.77
LIMK2-201ENST00000331728 CCAR1Q8IX12 1150 aaKnown RBP10.23□□□□□ -0.77
LIMK2-201ENST00000331728 EDC3Q96F86 508 aaKnown RBP10.23□□□□□ -0.77
LIMK2-201ENST00000331728 DDX21Q9NR30 783 aaKnown RBP eCLIP10.23□□□□□ -0.77
LIMK2-201ENST00000331728 SETD1AO15047 1707 aaKnown RBP10.23□□□□□ -0.77
LIMK2-201ENST00000331728 GIGYF1O75420 1035 aaPredicted RBP10.23□□□□□ -0.77
LIMK2-201ENST00000331728 ZSCAN25Q6NSZ9 544 aa10.23□□□□□ -0.77
LIMK2-201ENST00000331728 DDX46Q7L014 1031 aaKnown RBP10.23□□□□□ -0.77
LIMK2-201ENST00000331728 CACNA1FO60840 1977 aa10.23□□□□□ -0.77
LIMK2-201ENST00000331728 RIMS1Q86UR5 1692 aaKnown RBP10.23□□□□□ -0.77
LIMK2-201ENST00000331728 FAM208AQ9UK61 1670 aaKnown RBP10.23□□□□□ -0.77
LIMK2-201ENST00000331728 PPFIA3O75145 1194 aa10.23□□□□□ -0.77
LIMK2-201ENST00000331728 CCT2P78371 535 aaKnown RBP10.23□□□□□ -0.77
LIMK2-201ENST00000331728 STK38Q15208 465 aa10.23□□□□□ -0.77
LIMK2-201ENST00000331728 TAF3Q5VWG9 929 aa10.23□□□□□ -0.77
LIMK2-201ENST00000331728 ANKRD24Q8TF21 1146 aa10.23□□□□□ -0.77
LIMK2-201ENST00000331728 XAGE3Q8WTP9 111 aa10.23□□□□□ -0.77
LIMK2-201ENST00000331728 ANO10Q9NW15 660 aa10.23□□□□□ -0.77
LIMK2-201ENST00000331728 ADCY9O60503 1353 aa10.23□□□□□ -0.77
LIMK2-201ENST00000331728 CPLX1O14810 134 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 NR1I2O75469 434 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 SMC2O95347 1197 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 SLC39A6Q13433 755 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 PTPN14Q15678 1187 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 FSIP1Q8NA03 581 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 RGPD1P0DJD0 1748 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 PEAK1Q9H792 1746 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 GABPB1Q06547 395 aaPredicted RBP10.22□□□□□ -0.77
LIMK2-201ENST00000331728 CCDC129Q6ZRS4 1044 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 UBE3BQ7Z3V4 1068 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 FMNL2Q96PY5 1086 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 NRBP1Q9UHY1 535 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 NEMFO60524 1076 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 SASH1O94885 1247 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 HMGB1P09429 215 aaKnown RBP10.22□□□□□ -0.77
LIMK2-201ENST00000331728 COPS6Q7L5N1 327 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 ZNF589Q86UQ0 364 aaPredicted RBP10.22□□□□□ -0.77
LIMK2-201ENST00000331728 TDRD7Q8NHU6 1098 aaKnown RBP10.22□□□□□ -0.77
LIMK2-201ENST00000331728 CTNNA3Q9UI47 895 aa10.22□□□□□ -0.77
LIMK2-201ENST00000331728 CEP135Q66GS9 1140 aa10.21□□□□□ -0.77
LIMK2-201ENST00000331728 GTF3C6Q969F1 213 aa10.21□□□□□ -0.77
LIMK2-201ENST00000331728 TRMT1Q9NXH9 659 aaKnown RBP10.21□□□□□ -0.77
LIMK2-201ENST00000331728 NDUFB9Q9Y6M9 179 aa10.21□□□□□ -0.77
LIMK2-201ENST00000331728 NRXN3Q9Y4C0 1643 aa10.21□□□□□ -0.77
LIMK2-201ENST00000331728 MCMDC2Q4G0Z9 681 aa10.21□□□□□ -0.77
LIMK2-201ENST00000331728 PLA2G4DQ86XP0 818 aa10.21□□□□□ -0.77
LIMK2-201ENST00000331728 ZNF330Q9Y3S2 320 aaPredicted RBP10.21□□□□□ -0.77
LIMK2-201ENST00000331728 PRAMEF22A3QJZ6 481 aa10.21□□□□□ -0.78
LIMK2-201ENST00000331728 SYNE3Q6ZMZ3 975 aa10.21□□□□□ -0.78
LIMK2-201ENST00000331728 TATP17735 454 aaPredicted RBP10.2□□□□□ -0.78
LIMK2-201ENST00000331728 ST3GAL1Q11201 340 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 TFCP2Q12800 502 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 WASHC4Q2M389 1173 aa10.2□□□□□ -0.78
LIMK2-201ENST00000331728 LRRFIP1Q32MZ4 808 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms