RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 ARGLU1Q9NWB6 273 aaPredicted RBP21.37■■□□□ 1.01
SOCS3-201ENST00000330871 ORC3Q9UBD5 711 aaPredicted RBP21.37■■□□□ 1.01
SOCS3-201ENST00000330871 ACEP12821 1306 aa21.37■■□□□ 1.01
SOCS3-201ENST00000330871 KIF2AO00139 706 aaPredicted RBP21.37■■□□□ 1.01
SOCS3-201ENST00000330871 PTH1RQ03431 593 aa21.37■■□□□ 1.01
SOCS3-201ENST00000330871 LOC102724159A0A0B4J2E5 919 aa21.36■■□□□ 1.01
SOCS3-201ENST00000330871 PWP2Q15269 919 aaKnown RBP21.36■■□□□ 1.01
SOCS3-201ENST00000330871 VPS53Q5VIR6 699 aa21.36■■□□□ 1.01
SOCS3-201ENST00000330871 TCEANC2Q96MN5 208 aa21.36■■□□□ 1.01
SOCS3-201ENST00000330871 SH2B1Q9NRF2 756 aaPredicted RBP21.36■■□□□ 1.01
SOCS3-201ENST00000330871 RGPD1P0DJD0 1748 aa21.36■■□□□ 1.01
SOCS3-201ENST00000330871 ZSCAN31Q96LW9 406 aaPredicted RBP21.36■■□□□ 1.01
SOCS3-201ENST00000330871 CYP46A1Q9Y6A2 500 aa21.36■■□□□ 1.01
SOCS3-201ENST00000330871 LARP1Q6PKG0 1096 aaKnown RBP21.35■■□□□ 1.01
SOCS3-201ENST00000330871 HDGFP51858 240 aaKnown RBP21.35■■□□□ 1.01
SOCS3-201ENST00000330871 CEBPZQ03701 1054 aaKnown RBP21.35■■□□□ 1.01
SOCS3-201ENST00000330871 GPS2Q13227 327 aa21.35■■□□□ 1.01
SOCS3-201ENST00000330871 ERCC4Q92889 916 aaPredicted RBP21.35■■□□□ 1.01
SOCS3-201ENST00000330871 USP31Q70CQ4 1352 aa21.35■■□□□ 1.01
SOCS3-201ENST00000330871 PLEKHG3A1L390 1219 aa21.35■■□□□ 1.01
SOCS3-201ENST00000330871 IFIT2P09913 472 aaKnown RBP21.35■■□□□ 1.01
SOCS3-201ENST00000330871 HOMER1Q86YM7 354 aa21.35■■□□□ 1.01
SOCS3-201ENST00000330871 PI4K2BQ8TCG2 481 aa21.34■■□□□ 1.01
SOCS3-201ENST00000330871 TOMM22Q9NS69 142 aa21.34■■□□□ 1.01
SOCS3-201ENST00000330871 ATG3Q9NT62 314 aa21.34■■□□□ 1.01
SOCS3-201ENST00000330871 DNAI1Q9UI46 699 aa21.34■■□□□ 1.01
SOCS3-201ENST00000330871 SOX12O15370 315 aa21.34■■□□□ 1.01
SOCS3-201ENST00000330871 LMAN1P49257 510 aa21.34■■□□□ 1.01
SOCS3-201ENST00000330871 CHRM1P11229 460 aaPredicted RBP21.33■■□□□ 1.01
SOCS3-201ENST00000330871 SMC1AQ14683 1233 aaKnown RBP21.33■■□□□ 1.01
SOCS3-201ENST00000330871 SRLQ86TD4 932 aa21.33■■□□□ 1.01
SOCS3-201ENST00000330871 RRP15Q9Y3B9 282 aaKnown RBP21.33■■□□□ 1.01
SOCS3-201ENST00000330871 PEAK1Q9H792 1746 aa21.33■■□□□ 1.01
SOCS3-201ENST00000330871 TBC1D8O95759 1140 aa21.33■■□□□ 1
SOCS3-201ENST00000330871 REXO1L1PQ8IX06 675 aa21.33■■□□□ 1
SOCS3-201ENST00000330871 DHX40Q8IX18 779 aaKnown RBP21.33■■□□□ 1
SOCS3-201ENST00000330871 YY1AP1Q9H869 796 aa21.33■■□□□ 1
SOCS3-201ENST00000330871 SOS1Q07889 1333 aaPredicted RBP21.32■■□□□ 1
SOCS3-201ENST00000330871 MNS1Q8NEH6 495 aa21.32■■□□□ 1
SOCS3-201ENST00000330871 USP44Q9H0E7 712 aa21.32■■□□□ 1
SOCS3-201ENST00000330871 ZSWIM6Q9HCJ5 1215 aa21.32■■□□□ 1
SOCS3-201ENST00000330871 RAB11FIP3O75154 756 aa21.32■■□□□ 1
SOCS3-201ENST00000330871 UBTFL1P0CB47 393 aaPredicted RBP21.32■■□□□ 1
SOCS3-201ENST00000330871 STK3Q13188 491 aa21.32■■□□□ 1
SOCS3-201ENST00000330871 ICE2Q659A1 982 aa21.32■■□□□ 1
SOCS3-201ENST00000330871 NBPF11Q86T75 865 aa21.32■■□□□ 1
SOCS3-201ENST00000330871 AOPEPQ8N6M6 819 aa21.32■■□□□ 1
SOCS3-201ENST00000330871 SSH3Q8TE77 659 aa21.32■■□□□ 1
SOCS3-201ENST00000330871 DDX11Q96FC9 970 aa21.32■■□□□ 1
SOCS3-201ENST00000330871 USP6P35125 1406 aa21.31■■□□□ 1
SOCS3-201ENST00000330871 NECTIN2Q92692 538 aa21.31■■□□□ 1
SOCS3-201ENST00000330871 CARD6Q9BX69 1037 aa21.31■■□□□ 1
SOCS3-201ENST00000330871 UBXN6Q9BZV1 441 aa21.31■■□□□ 1
SOCS3-201ENST00000330871 GEMIN8Q9NWZ8 242 aaKnown RBP21.31■■□□□ 1
SOCS3-201ENST00000330871 KDRP35968 1356 aa21.31■■□□□ 1
SOCS3-201ENST00000330871 STX1AQ16623 288 aa21.31■■□□□ 1
SOCS3-201ENST00000330871 CNTROBQ8N137 903 aa21.31■■□□□ 1
SOCS3-201ENST00000330871 CWC15Q9P013 229 aaKnown RBP21.31■■□□□ 1
SOCS3-201ENST00000330871 DIP2BQ9P265 1576 aa21.31■■□□□ 1
SOCS3-201ENST00000330871 AGLP35573 1532 aa21.3■■□□□ 1
SOCS3-201ENST00000330871 KCND1Q9NSA2 647 aa21.3■■□□□ 1
SOCS3-201ENST00000330871 URI1O94763 535 aaPredicted RBP21.3■■□□□ 1
SOCS3-201ENST00000330871 CAVIN2O95810 425 aa21.3■■□□□ 1
SOCS3-201ENST00000330871 ARMCX5Q6P1M9 558 aa21.3■■□□□ 1
SOCS3-201ENST00000330871 FBXO18Q8NFZ0 1043 aa21.3■■□□□ 1
SOCS3-201ENST00000330871 SURF6O75683 361 aaKnown RBP21.29■■□□□ 1
SOCS3-201ENST00000330871 PDCP20941 246 aa21.29■■□□□ 1
SOCS3-201ENST00000330871 NUTM2FA1L443 756 aa21.28■■□□□ 1
SOCS3-201ENST00000330871 GSDMDP57764 484 aa21.28■■□□□ 1
SOCS3-201ENST00000330871 TMC6Q7Z403 805 aa21.28■■□□□ 1
SOCS3-201ENST00000330871 EYA1Q99502 592 aa21.28■■□□□ 1
SOCS3-201ENST00000330871 ROBO2Q9HCK4 1378 aa21.28■■□□□ 1
SOCS3-201ENST00000330871 GOLGA5Q8TBA6 731 aa21.28■■□□□ 1
SOCS3-201ENST00000330871 ADAM21Q9UKJ8 722 aa21.28■■□□□ 1
SOCS3-201ENST00000330871 FLT4P35916 1363 aa21.28■■□□□ 1
SOCS3-201ENST00000330871 FANCGO15287 622 aa21.28■■□□□ 1
SOCS3-201ENST00000330871 TADA3O75528 432 aa21.28■■□□□ 1
SOCS3-201ENST00000330871 CC2D1AQ6P1N0 951 aaPredicted RBP21.28■■□□□ 1
SOCS3-201ENST00000330871 NALCNQ8IZF0 1738 aa21.27■■□□□ 1
SOCS3-201ENST00000330871 SMC2O95347 1197 aa21.27■■□□□ 1
SOCS3-201ENST00000330871 EVCP57679 992 aa21.27■■□□□ 1
SOCS3-201ENST00000330871 RHPN1Q8TCX5 695 aa21.27■■□□□ 1
SOCS3-201ENST00000330871 XRN1Q8IZH2 1706 aaKnown RBP21.27■■□□□ 1
SOCS3-201ENST00000330871 SBNO1A3KN83 1393 aa21.27■■□□□ 1
SOCS3-201ENST00000330871 FAM69CQ0P6D2 419 aa21.27■□□□□ 0.99
SOCS3-201ENST00000330871 AK7Q96M32 723 aa21.27■□□□□ 0.99
SOCS3-201ENST00000330871 IGSF1Q8N6C5 1336 aa21.26■□□□□ 0.99
SOCS3-201ENST00000330871 GNAT3A8MTJ3 354 aa21.26■□□□□ 0.99
SOCS3-201ENST00000330871 ETF1P62495 437 aaKnown RBP21.26■□□□□ 0.99
SOCS3-201ENST00000330871 GNL2Q13823 731 aaKnown RBP21.26■□□□□ 0.99
SOCS3-201ENST00000330871 PPP1R42Q7Z4L9 355 aa21.26■□□□□ 0.99
SOCS3-201ENST00000330871 FAM177A1Q8N128 213 aaPredicted RBP21.26■□□□□ 0.99
SOCS3-201ENST00000330871 FTOQ9C0B1 505 aaKnown RBP eCLIP21.26■□□□□ 0.99
SOCS3-201ENST00000330871 SFPQP23246 707 aaKnown RBP eCLIP21.26■□□□□ 0.99
SOCS3-201ENST00000330871 DRC1Q96MC2 740 aa21.26■□□□□ 0.99
SOCS3-201ENST00000330871 OSBPL5Q9H0X9 879 aaPredicted RBP21.26■□□□□ 0.99
SOCS3-201ENST00000330871 ADCY9O60503 1353 aa21.25■□□□□ 0.99
SOCS3-201ENST00000330871 PXDNLA1KZ92 1463 aa21.25■□□□□ 0.99
SOCS3-201ENST00000330871 PSDA5PKW4 1024 aaPredicted RBP21.25■□□□□ 0.99
SOCS3-201ENST00000330871 POLA2Q14181 598 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms