RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 DEFB115Q30KQ5 88 aa30.23■■■□□ 2.43
TMEM54-201ENST00000329151 DUSP27Q5VZP5 1158 aa30.23■■■□□ 2.43
TMEM54-201ENST00000329151 ZNF428Q96B54 188 aa30.23■■■□□ 2.43
TMEM54-201ENST00000329151 PRKRIP1Q9H875 184 aaPredicted RBP30.23■■■□□ 2.43
TMEM54-201ENST00000329151 VEGFBP49765 207 aa30.22■■■□□ 2.43
TMEM54-201ENST00000329151 BCL2L13Q9BXK5 485 aa30.22■■■□□ 2.43
TMEM54-201ENST00000329151 RTFDC1Q9BY42 306 aaPredicted RBP30.22■■■□□ 2.43
TMEM54-201ENST00000329151 TAF1P21675 1872 aa30.21■■■□□ 2.43
TMEM54-201ENST00000329151 GOLGA2Q08379 1002 aa30.21■■■□□ 2.43
TMEM54-201ENST00000329151 TNIP1Q15025 636 aa30.21■■■□□ 2.43
TMEM54-201ENST00000329151 PAXIP1Q6ZW49 1069 aaPredicted RBP30.21■■■□□ 2.43
TMEM54-201ENST00000329151 ADARB2Q9NS39 739 aaKnown RBP30.21■■■□□ 2.43
TMEM54-201ENST00000329151 LTBP1Q14766 1721 aa30.2■■■□□ 2.43
TMEM54-201ENST00000329151 ATP5J2-PTCD1G3V325 749 aa30.2■■■□□ 2.43
TMEM54-201ENST00000329151 CIAPIN1Q6FI81 312 aa30.2■■■□□ 2.43
TMEM54-201ENST00000329151 MBIPQ9NS73 344 aa30.2■■■□□ 2.43
TMEM54-201ENST00000329151 GNAI1P63096 354 aa30.19■■■□□ 2.42
TMEM54-201ENST00000329151 KIAA2012Q0VF49 1180 aa30.19■■■□□ 2.42
TMEM54-201ENST00000329151 RIC3Q7Z5B4 369 aa30.19■■■□□ 2.42
TMEM54-201ENST00000329151 FAM89AQ96GI7 184 aa30.19■■■□□ 2.42
TMEM54-201ENST00000329151 GPRC5DQ9NZD1 345 aa30.19■■■□□ 2.42
TMEM54-201ENST00000329151 TRPM7Q96QT4 1865 aa30.19■■■□□ 2.42
TMEM54-201ENST00000329151 HSP90B1P14625 803 aaKnown RBP30.18■■■□□ 2.42
TMEM54-201ENST00000329151 CXCL9Q07325 125 aa30.18■■■□□ 2.42
TMEM54-201ENST00000329151 CHMP4AQ9BY43 222 aa30.18■■■□□ 2.42
TMEM54-201ENST00000329151 DDX60Q8IY21 1712 aaKnown RBP30.18■■■□□ 2.42
TMEM54-201ENST00000329151 RTL5Q5HYW3 569 aaPredicted RBP30.17■■■□□ 2.42
TMEM54-201ENST00000329151 ISCA1Q9BUE6 129 aa30.17■■■□□ 2.42
TMEM54-201ENST00000329151 IFT57Q9NWB7 429 aa30.17■■■□□ 2.42
TMEM54-201ENST00000329151 RASSF10A6NK89 507 aa30.16■■■□□ 2.42
TMEM54-201ENST00000329151 APAF1O14727 1248 aa30.16■■■□□ 2.42
TMEM54-201ENST00000329151 GMPSP49915 693 aaPredicted RBP30.16■■■□□ 2.42
TMEM54-201ENST00000329151 FOXN1O15353 648 aa30.15■■■□□ 2.42
TMEM54-201ENST00000329151 RAD17O75943 681 aa30.15■■■□□ 2.42
TMEM54-201ENST00000329151 CTCFP49711 727 aaPredicted RBP30.15■■■□□ 2.42
TMEM54-201ENST00000329151 CDHR2Q9BYE9 1310 aa30.15■■■□□ 2.42
TMEM54-201ENST00000329151 NSFL1CQ9UNZ2 370 aaKnown RBP30.14■■■□□ 2.42
TMEM54-201ENST00000329151 C6orf229H3BNL8 230 aa30.13■■■□□ 2.41
TMEM54-201ENST00000329151 ELL2O00472 640 aaPredicted RBP30.13■■■□□ 2.41
TMEM54-201ENST00000329151 IRS4O14654 1257 aaPredicted RBP30.13■■■□□ 2.41
TMEM54-201ENST00000329151 ECE1P42892 770 aa30.12■■■□□ 2.41
TMEM54-201ENST00000329151 MAP2K1Q02750 393 aaPredicted RBP30.12■■■□□ 2.41
TMEM54-201ENST00000329151 GRM1Q13255 1194 aa30.12■■■□□ 2.41
TMEM54-201ENST00000329151 SF3B3Q15393 1217 aaKnown RBP30.12■■■□□ 2.41
TMEM54-201ENST00000329151 WASHC4Q2M389 1173 aa30.12■■■□□ 2.41
TMEM54-201ENST00000329151 WDR33Q9C0J8 1336 aaKnown RBP30.12■■■□□ 2.41
TMEM54-201ENST00000329151 LRRC37AA6NMS7 1700 aa30.11■■■□□ 2.41
TMEM54-201ENST00000329151 EYA3Q99504 573 aa30.11■■■□□ 2.41
TMEM54-201ENST00000329151 H7C1D1 291 aa30.1■■■□□ 2.41
TMEM54-201ENST00000329151 DDX58O95786 925 aaKnown RBP30.1■■■□□ 2.41
TMEM54-201ENST00000329151 TRIM28Q13263 835 aaKnown RBP30.1■■■□□ 2.41
TMEM54-201ENST00000329151 CELF1Q92879 486 aaKnown RBP30.1■■■□□ 2.41
TMEM54-201ENST00000329151 BEGAINQ9BUH8 593 aa30.1■■■□□ 2.41
TMEM54-201ENST00000329151 TRAF5O00463 557 aa30.09■■■□□ 2.41
TMEM54-201ENST00000329151 ZNF853P0CG23 659 aa30.09■■■□□ 2.41
TMEM54-201ENST00000329151 PRDM10Q9NQV6 1147 aa30.09■■■□□ 2.41
TMEM54-201ENST00000329151 G3V3G9 751 aa30.08■■■□□ 2.41
TMEM54-201ENST00000329151 DCAF8Q5TAQ9 597 aa30.08■■■□□ 2.41
TMEM54-201ENST00000329151 MYD88Q99836 296 aa30.08■■■□□ 2.41
TMEM54-201ENST00000329151 WBP1LQ9NX94 342 aa30.08■■■□□ 2.41
TMEM54-201ENST00000329151 RIMBP2O15034 1052 aa30.07■■■□□ 2.4
TMEM54-201ENST00000329151 CCDC30Q5VVM6 783 aa30.07■■■□□ 2.4
TMEM54-201ENST00000329151 ZBTB38Q8NAP3 1195 aaPredicted RBP30.07■■■□□ 2.4
TMEM54-201ENST00000329151 CNOT7Q9UIV1 285 aaKnown RBP30.07■■■□□ 2.4
TMEM54-201ENST00000329151 RPS8P62241 208 aaKnown RBP30.06■■■□□ 2.4
TMEM54-201ENST00000329151 CAPNS2Q96L46 248 aa30.06■■■□□ 2.4
TMEM54-201ENST00000329151 PHAXQ9H814 394 aaKnown RBP30.06■■■□□ 2.4
TMEM54-201ENST00000329151 FMR1Q06787 632 aaKnown RBP eCLIP30.05■■■□□ 2.4
TMEM54-201ENST00000329151 ZC3H15Q8WU90 426 aaKnown RBP30.05■■■□□ 2.4
TMEM54-201ENST00000329151 DBNDD1Q9H9R9 158 aa30.05■■■□□ 2.4
TMEM54-201ENST00000329151 DUOX1Q9NRD9 1551 aa30.04■■■□□ 2.4
TMEM54-201ENST00000329151 CELF2O95319 508 aaKnown RBP30.04■■■□□ 2.4
TMEM54-201ENST00000329151 CCDC152Q4G0S7 254 aa30.04■■■□□ 2.4
TMEM54-201ENST00000329151 CCDC191Q8NCU4 936 aa30.04■■■□□ 2.4
TMEM54-201ENST00000329151 ZNF408Q9H9D4 720 aa30.04■■■□□ 2.4
TMEM54-201ENST00000329151 CWC25Q9NXE8 425 aaPredicted RBP30.04■■■□□ 2.4
TMEM54-201ENST00000329151 LBX1P52954 281 aa30.03■■■□□ 2.4
TMEM54-201ENST00000329151 GPSM2P81274 684 aa30.03■■■□□ 2.4
TMEM54-201ENST00000329151 MICALL2Q8IY33 904 aa30.03■■■□□ 2.4
TMEM54-201ENST00000329151 ZC3H12CQ9C0D7 883 aaKnown RBP30.03■■■□□ 2.4
TMEM54-201ENST00000329151 ANKIB1Q9P2G1 1089 aa30.03■■■□□ 2.4
TMEM54-201ENST00000329151 YDJCA8MPS7 323 aa30.02■■■□□ 2.4
TMEM54-201ENST00000329151 CYP4F22Q6NT55 531 aa30.02■■■□□ 2.4
TMEM54-201ENST00000329151 GPR101Q96P66 508 aaPredicted RBP30.02■■■□□ 2.4
TMEM54-201ENST00000329151 GLIS2Q9BZE0 524 aaPredicted RBP30.02■■■□□ 2.4
TMEM54-201ENST00000329151 TLL2Q9Y6L7 1015 aa30.02■■■□□ 2.4
TMEM54-201ENST00000329151 CST9Q5W186 159 aa30.01■■■□□ 2.39
TMEM54-201ENST00000329151 CDC37L1Q7L3B6 337 aa30.01■■■□□ 2.39
TMEM54-201ENST00000329151 STK31Q9BXU1 1019 aa30.01■■■□□ 2.39
TMEM54-201ENST00000329151 PSMD14O00487 310 aa30■■■□□ 2.39
TMEM54-201ENST00000329151 ECE2O60344 883 aa30■■■□□ 2.39
TMEM54-201ENST00000329151 C8orf58Q8NAV2 365 aa30■■■□□ 2.39
TMEM54-201ENST00000329151 DPF2Q92785 391 aa30■■■□□ 2.39
TMEM54-201ENST00000329151 POLLQ9UGP5 575 aa30■■■□□ 2.39
TMEM54-201ENST00000329151 ZBTB12Q9Y330 459 aaPredicted RBP30■■■□□ 2.39
TMEM54-201ENST00000329151 PDE8AO60658 829 aa29.99■■■□□ 2.39
TMEM54-201ENST00000329151 PCCAP05165 728 aaPredicted RBP29.99■■■□□ 2.39
TMEM54-201ENST00000329151 NEXNQ0ZGT2 675 aa29.99■■■□□ 2.39
TMEM54-201ENST00000329151 DOK7Q18PE1 504 aa29.99■■■□□ 2.39
TMEM54-201ENST00000329151 TRPM4Q8TD43 1214 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms