RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.76■□□□□ 0.75
LMNB2-201ENST00000325327 BMP2KLQ5H9B9 411 aa19.75■□□□□ 0.75
LMNB2-201ENST00000325327 ZNF804AQ7Z570 1209 aa19.75■□□□□ 0.75
LMNB2-201ENST00000325327 MSNP26038 577 aaKnown RBP19.75■□□□□ 0.75
LMNB2-201ENST00000325327 ANKARQ7Z5J8 1434 aa19.75■□□□□ 0.75
LMNB2-201ENST00000325327 KIDINS220Q9ULH0 1771 aa19.75■□□□□ 0.75
LMNB2-201ENST00000325327 SYNMO15061 1565 aa19.75■□□□□ 0.75
LMNB2-201ENST00000325327 SOS1Q07889 1333 aaPredicted RBP19.75■□□□□ 0.75
LMNB2-201ENST00000325327 BCS1LQ9Y276 419 aa19.75■□□□□ 0.75
LMNB2-201ENST00000325327 MYO1BO43795 1136 aa19.74■□□□□ 0.75
LMNB2-201ENST00000325327 SLC4A4Q9Y6R1 1079 aa19.74■□□□□ 0.75
LMNB2-201ENST00000325327 NEURL1BA8MQ27 555 aa19.74■□□□□ 0.75
LMNB2-201ENST00000325327 RBM17Q96I25 401 aaKnown RBP19.74■□□□□ 0.75
LMNB2-201ENST00000325327 PAG1Q9NWQ8 432 aa19.74■□□□□ 0.75
LMNB2-201ENST00000325327 UNC13BO14795 1591 aa19.74■□□□□ 0.75
LMNB2-201ENST00000325327 PRPF40AO75400 957 aaKnown RBP19.73■□□□□ 0.75
LMNB2-201ENST00000325327 MICU3Q86XE3 530 aa19.73■□□□□ 0.75
LMNB2-201ENST00000325327 E9PCH4 1651 aa19.73■□□□□ 0.75
LMNB2-201ENST00000325327 C1orf167Q5SNV9 1468 aa19.73■□□□□ 0.75
LMNB2-201ENST00000325327 ATF5Q9Y2D1 282 aaPredicted RBP19.73■□□□□ 0.75
LMNB2-201ENST00000325327 PPRC1Q5VV67 1664 aaKnown RBP19.72■□□□□ 0.75
LMNB2-201ENST00000325327 CHMP4BP1P59074 171 aa19.72■□□□□ 0.75
LMNB2-201ENST00000325327 CTCFLQ8NI51 663 aaPredicted RBP19.72■□□□□ 0.75
LMNB2-201ENST00000325327 MAGEB6Q8N7X4 407 aa19.72■□□□□ 0.75
LMNB2-201ENST00000325327 CCDC47Q96A33 483 aaKnown RBP19.72■□□□□ 0.75
LMNB2-201ENST00000325327 CRNKL1Q9BZJ0 848 aaKnown RBP19.72■□□□□ 0.75
LMNB2-201ENST00000325327 USP44Q9H0E7 712 aa19.72■□□□□ 0.75
LMNB2-201ENST00000325327 DPP8Q6V1X1 898 aaPredicted RBP19.72■□□□□ 0.75
LMNB2-201ENST00000325327 SRP68Q9UHB9 627 aaKnown RBP19.72■□□□□ 0.75
LMNB2-201ENST00000325327 SPHKAPQ2M3C7 1700 aa19.71■□□□□ 0.75
LMNB2-201ENST00000325327 LARGE2Q8N3Y3 721 aa19.71■□□□□ 0.75
LMNB2-201ENST00000325327 MFSD6Q6ZSS7 791 aa19.71■□□□□ 0.75
LMNB2-201ENST00000325327 HLA-DOAP06340 250 aa19.7■□□□□ 0.74
LMNB2-201ENST00000325327 ME1P48163 572 aa19.7■□□□□ 0.74
LMNB2-201ENST00000325327 ADAMTS13Q76LX8 1427 aa19.7■□□□□ 0.74
LMNB2-201ENST00000325327 HDAC9Q9UKV0 1011 aa19.7■□□□□ 0.74
LMNB2-201ENST00000325327 RPS8P62241 208 aaKnown RBP19.7■□□□□ 0.74
LMNB2-201ENST00000325327 SMIM5Q71RC9 77 aa19.7■□□□□ 0.74
LMNB2-201ENST00000325327 PCMTD1Q96MG8 357 aaPredicted RBP19.7■□□□□ 0.74
LMNB2-201ENST00000325327 SLC12A7Q9Y666 1083 aa19.7■□□□□ 0.74
LMNB2-201ENST00000325327 TRMT1LQ7Z2T5 733 aaKnown RBP19.7■□□□□ 0.74
LMNB2-201ENST00000325327 GJD4Q96KN9 370 aaPredicted RBP19.7■□□□□ 0.74
LMNB2-201ENST00000325327 ANKRD2Q9GZV1 360 aa19.7■□□□□ 0.74
LMNB2-201ENST00000325327 ZHX3Q9H4I2 956 aa19.7■□□□□ 0.74
LMNB2-201ENST00000325327 RNF41Q9H4P4 317 aaPredicted RBP19.7■□□□□ 0.74
LMNB2-201ENST00000325327 EYA3Q99504 573 aa19.7■□□□□ 0.74
LMNB2-201ENST00000325327 INO80Q9ULG1 1556 aaPredicted RBP19.7■□□□□ 0.74
LMNB2-201ENST00000325327 GOLGA8BA8MQT2 603 aa19.69■□□□□ 0.74
LMNB2-201ENST00000325327 GLI2P10070 1586 aa19.69■□□□□ 0.74
LMNB2-201ENST00000325327 LDHBP07195 334 aaKnown RBP19.69■□□□□ 0.74
LMNB2-201ENST00000325327 RNF214Q8ND24 703 aa19.69■□□□□ 0.74
LMNB2-201ENST00000325327 GGA1Q9UJY5 639 aa19.69■□□□□ 0.74
LMNB2-201ENST00000325327 MYCNP04198 464 aaPredicted RBP19.69■□□□□ 0.74
LMNB2-201ENST00000325327 HIBADHP31937 336 aaKnown RBP19.69■□□□□ 0.74
LMNB2-201ENST00000325327 KIAA2012Q0VF49 1180 aa19.69■□□□□ 0.74
LMNB2-201ENST00000325327 TMEM67Q5HYA8 995 aa19.69■□□□□ 0.74
LMNB2-201ENST00000325327 CDK5RAP3Q96JB5 506 aa19.69■□□□□ 0.74
LMNB2-201ENST00000325327 SSBP05455 408 aaKnown RBP eCLIP19.69■□□□□ 0.74
LMNB2-201ENST00000325327 CHST3Q7LGC8 479 aa19.69■□□□□ 0.74
LMNB2-201ENST00000325327 CAMSAP1Q5T5Y3 1602 aa19.68■□□□□ 0.74
LMNB2-201ENST00000325327 CABP5Q9NP86 173 aa19.68■□□□□ 0.74
LMNB2-201ENST00000325327 MCM9Q9NXL9 1143 aa19.68■□□□□ 0.74
LMNB2-201ENST00000325327 PDE4BQ07343 736 aa19.68■□□□□ 0.74
LMNB2-201ENST00000325327 NMIQ13287 307 aaPredicted RBP19.68■□□□□ 0.74
LMNB2-201ENST00000325327 HOMER1Q86YM7 354 aa19.68■□□□□ 0.74
LMNB2-201ENST00000325327 ARHGEF40Q8TER5 1519 aa19.68■□□□□ 0.74
LMNB2-201ENST00000325327 TNS3Q68CZ2 1445 aa19.68■□□□□ 0.74
LMNB2-201ENST00000325327 CDKL5O76039 1030 aa19.68■□□□□ 0.74
LMNB2-201ENST00000325327 ZNF76P36508 570 aa19.68■□□□□ 0.74
LMNB2-201ENST00000325327 XAGE2Q96GT9 111 aa19.67■□□□□ 0.74
LMNB2-201ENST00000325327 AGLP35573 1532 aa19.67■□□□□ 0.74
LMNB2-201ENST00000325327 RTL1A6NKG5 1358 aa19.67■□□□□ 0.74
LMNB2-201ENST00000325327 SASS6Q6UVJ0 657 aa19.67■□□□□ 0.74
LMNB2-201ENST00000325327 NFKBIBQ15653 356 aa19.67■□□□□ 0.74
LMNB2-201ENST00000325327 SKOR2Q2VWA4 1001 aaPredicted RBP19.67■□□□□ 0.74
LMNB2-201ENST00000325327 GPR162Q16538 588 aa19.66■□□□□ 0.74
LMNB2-201ENST00000325327 EDC3Q96F86 508 aaKnown RBP19.66■□□□□ 0.74
LMNB2-201ENST00000325327 HOOK1Q9UJC3 728 aaKnown RBP19.66■□□□□ 0.74
LMNB2-201ENST00000325327 TNNI3KQ59H18 835 aa19.66■□□□□ 0.74
LMNB2-201ENST00000325327 ZGPATQ8N5A5 531 aaKnown RBP19.66■□□□□ 0.74
LMNB2-201ENST00000325327 BRF1Q92994 677 aa19.66■□□□□ 0.74
LMNB2-201ENST00000325327 RBM8AQ9Y5S9 174 aaKnown RBP19.66■□□□□ 0.74
LMNB2-201ENST00000325327 FPGT-TNNI3KV9GXZ4 949 aa19.66■□□□□ 0.74
LMNB2-201ENST00000325327 MCMDC2Q4G0Z9 681 aa19.66■□□□□ 0.74
LMNB2-201ENST00000325327 GOLGA8AA7E2F4 631 aa19.66■□□□□ 0.74
LMNB2-201ENST00000325327 RBM6P78332 1123 aaKnown RBP19.66■□□□□ 0.74
LMNB2-201ENST00000325327 GSTO1P78417 241 aa19.66■□□□□ 0.74
LMNB2-201ENST00000325327 CAVIN1Q6NZI2 390 aaKnown RBP19.66■□□□□ 0.74
LMNB2-201ENST00000325327 ZSCAN31Q96LW9 406 aaPredicted RBP19.66■□□□□ 0.74
LMNB2-201ENST00000325327 NEK1Q96PY6 1258 aa19.66■□□□□ 0.74
LMNB2-201ENST00000325327 SEC63Q9UGP8 760 aaKnown RBP19.66■□□□□ 0.74
LMNB2-201ENST00000325327 KRT18P05783 430 aaKnown RBP19.65■□□□□ 0.74
LMNB2-201ENST00000325327 ZFYP08048 801 aaPredicted RBP19.65■□□□□ 0.74
LMNB2-201ENST00000325327 IBSPP21815 317 aaPredicted RBP19.65■□□□□ 0.74
LMNB2-201ENST00000325327 PLEKHM2Q8IWE5 1019 aa19.65■□□□□ 0.74
LMNB2-201ENST00000325327 SMC5Q8IY18 1101 aa19.65■□□□□ 0.74
LMNB2-201ENST00000325327 JCADQ9P266 1359 aa19.65■□□□□ 0.74
LMNB2-201ENST00000325327 MAP3K15Q6ZN16 1313 aa19.65■□□□□ 0.74
LMNB2-201ENST00000325327 NLGN1Q8N2Q7 840 aa19.65■□□□□ 0.74
LMNB2-201ENST00000325327 KINO60870 393 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms