RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 PHAXQ9H814 394 aaKnown RBP16.04■□□□□ 0.16
TPM3-204ENST00000323144 ANKRD13DQ6ZTN6 518 aa16.03■□□□□ 0.16
TPM3-204ENST00000323144 C8orf58Q8NAV2 365 aa16.03■□□□□ 0.16
TPM3-204ENST00000323144 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
TPM3-204ENST00000323144 RTFDC1Q9BY42 306 aaPredicted RBP16.03■□□□□ 0.16
TPM3-204ENST00000323144 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
TPM3-204ENST00000323144 ITGBL1O95965 494 aaPredicted RBP16.02■□□□□ 0.16
TPM3-204ENST00000323144 EPS15P42566 896 aa16.02■□□□□ 0.16
TPM3-204ENST00000323144 GNAI1P63096 354 aa16.02■□□□□ 0.16
TPM3-204ENST00000323144 DPP8Q6V1X1 898 aaPredicted RBP16.02■□□□□ 0.16
TPM3-204ENST00000323144 DDX46Q7L014 1031 aaKnown RBP16.02■□□□□ 0.16
TPM3-204ENST00000323144 CELF1Q92879 486 aaKnown RBP16.02■□□□□ 0.16
TPM3-204ENST00000323144 CLEC11AQ9Y240 323 aa16.02■□□□□ 0.16
TPM3-204ENST00000323144 FMR1Q06787 632 aaKnown RBP eCLIP16.01■□□□□ 0.15
TPM3-204ENST00000323144 GOLGA2Q08379 1002 aa16.01■□□□□ 0.15
TPM3-204ENST00000323144 GRIPAP1Q4V328 841 aa16.01■□□□□ 0.15
TPM3-204ENST00000323144 COL13A1Q5TAT6 717 aaPredicted RBP16.01■□□□□ 0.15
TPM3-204ENST00000323144 TSPYL6Q8N831 410 aa16.01■□□□□ 0.15
TPM3-204ENST00000323144 LMOD1P29536 600 aaPredicted RBP16■□□□□ 0.15
TPM3-204ENST00000323144 KIAA2012Q0VF49 1180 aa16■□□□□ 0.15
TPM3-204ENST00000323144 SP8Q8IXZ3 490 aa16■□□□□ 0.15
TPM3-204ENST00000323144 MPNDQ8N594 471 aa16■□□□□ 0.15
TPM3-204ENST00000323144 MYD88Q99836 296 aa16■□□□□ 0.15
TPM3-204ENST00000323144 YDJCA8MPS7 323 aa15.99■□□□□ 0.15
TPM3-204ENST00000323144 CALD1Q05682 793 aaKnown RBP15.99■□□□□ 0.15
TPM3-204ENST00000323144 CXCL9Q07325 125 aa15.99■□□□□ 0.15
TPM3-204ENST00000323144 RIC3Q7Z5B4 369 aa15.99■□□□□ 0.15
TPM3-204ENST00000323144 PNMA8AQ86V59 439 aaPredicted RBP15.99■□□□□ 0.15
TPM3-204ENST00000323144 SUPT20HQ8NEM7 779 aa15.99■□□□□ 0.15
TPM3-204ENST00000323144 GPR101Q96P66 508 aaPredicted RBP15.99■□□□□ 0.15
TPM3-204ENST00000323144 CACNA1FO60840 1977 aa15.98■□□□□ 0.15
TPM3-204ENST00000323144 SHTN1A0MZ66 631 aa15.98■□□□□ 0.15
TPM3-204ENST00000323144 TMEM88BA6NKF7 163 aa15.98■□□□□ 0.15
TPM3-204ENST00000323144 IRS4O14654 1257 aaPredicted RBP15.98■□□□□ 0.15
TPM3-204ENST00000323144 BBOX1O75936 387 aa15.98■□□□□ 0.15
TPM3-204ENST00000323144 GMPSP49915 693 aaPredicted RBP15.98■□□□□ 0.15
TPM3-204ENST00000323144 CNTROBQ8N137 903 aa15.98■□□□□ 0.15
TPM3-204ENST00000323144 TMX4Q9H1E5 349 aaPredicted RBP15.98■□□□□ 0.15
TPM3-204ENST00000323144 GPRC5DQ9NZD1 345 aa15.98■□□□□ 0.15
TPM3-204ENST00000323144 ZNRF3Q9ULT6 936 aa15.98■□□□□ 0.15
TPM3-204ENST00000323144 RAD17O75943 681 aa15.97■□□□□ 0.15
TPM3-204ENST00000323144 GPSM2P81274 684 aa15.97■□□□□ 0.15
TPM3-204ENST00000323144 SF3B3Q15393 1217 aaKnown RBP15.97■□□□□ 0.15
TPM3-204ENST00000323144 JARID2Q92833 1246 aaPredicted RBP15.97■□□□□ 0.15
TPM3-204ENST00000323144 TRAF5O00463 557 aa15.96■□□□□ 0.15
TPM3-204ENST00000323144 TRPM4Q8TD43 1214 aa15.96■□□□□ 0.15
TPM3-204ENST00000323144 SEC31BQ9NQW1 1179 aa15.96■□□□□ 0.15
TPM3-204ENST00000323144 CDHR2Q9BYE9 1310 aa15.95■□□□□ 0.14
TPM3-204ENST00000323144 VEGFBP49765 207 aa15.95■□□□□ 0.14
TPM3-204ENST00000323144 TRIM28Q13263 835 aaKnown RBP15.95■□□□□ 0.14
TPM3-204ENST00000323144 CIAPIN1Q6FI81 312 aa15.95■□□□□ 0.14
TPM3-204ENST00000323144 TMC4Q7Z404 712 aa15.95■□□□□ 0.14
TPM3-204ENST00000323144 ZBTB38Q8NAP3 1195 aaPredicted RBP15.95■□□□□ 0.14
TPM3-204ENST00000323144 CCDC85AQ96PX6 553 aaPredicted RBP15.95■□□□□ 0.14
TPM3-204ENST00000323144 VPS33BQ9H267 617 aa15.95■□□□□ 0.14
TPM3-204ENST00000323144 DBNDD1Q9H9R9 158 aa15.95■□□□□ 0.14
TPM3-204ENST00000323144 MRS2Q9HD23 443 aa15.95■□□□□ 0.14
TPM3-204ENST00000323144 RTL9Q8NET4 1388 aa15.95■□□□□ 0.14
TPM3-204ENST00000323144 FANCIQ9NVI1 1328 aa15.94■□□□□ 0.14
TPM3-204ENST00000323144 CCDC30Q5VVM6 783 aa15.94■□□□□ 0.14
TPM3-204ENST00000323144 WWC1Q8IX03 1113 aa15.94■□□□□ 0.14
TPM3-204ENST00000323144 ADARB2Q9NS39 739 aaKnown RBP15.94■□□□□ 0.14
TPM3-204ENST00000323144 POLLQ9UGP5 575 aa15.94■□□□□ 0.14
TPM3-204ENST00000323144 MAP3K2Q9Y2U5 619 aa15.94■□□□□ 0.14
TPM3-204ENST00000323144 RASSF10A6NK89 507 aa15.93■□□□□ 0.14
TPM3-204ENST00000323144 RIMBP2O15034 1052 aa15.93■□□□□ 0.14
TPM3-204ENST00000323144 FOXN1O15353 648 aa15.93■□□□□ 0.14
TPM3-204ENST00000323144 PCCAP05165 728 aaPredicted RBP15.93■□□□□ 0.14
TPM3-204ENST00000323144 IGKV5-2P06315 115 aa15.93■□□□□ 0.14
TPM3-204ENST00000323144 CCDC27Q2M243 656 aa15.93■□□□□ 0.14
TPM3-204ENST00000323144 USP50Q70EL3 339 aaPredicted RBP15.93■□□□□ 0.14
TPM3-204ENST00000323144 G2E3Q7L622 706 aa15.93■□□□□ 0.14
TPM3-204ENST00000323144 METTL22Q9BUU2 404 aaPredicted RBP15.93■□□□□ 0.14
TPM3-204ENST00000323144 CWC25Q9NXE8 425 aaPredicted RBP15.93■□□□□ 0.14
TPM3-204ENST00000323144 NSFL1CQ9UNZ2 370 aaKnown RBP15.93■□□□□ 0.14
TPM3-204ENST00000323144 ECE2O60344 883 aa15.92■□□□□ 0.14
TPM3-204ENST00000323144 TWISTNBQ3B726 338 aaPredicted RBP15.92■□□□□ 0.14
TPM3-204ENST00000323144 CCDC191Q8NCU4 936 aa15.92■□□□□ 0.14
TPM3-204ENST00000323144 ABT1Q9ULW3 272 aaKnown RBP15.92■□□□□ 0.14
TPM3-204ENST00000323144 ZBTB12Q9Y330 459 aaPredicted RBP15.92■□□□□ 0.14
TPM3-204ENST00000323144 POLR2AP24928 1970 aaKnown RBP15.91■□□□□ 0.14
TPM3-204ENST00000323144 C6orf229H3BNL8 230 aa15.91■□□□□ 0.14
TPM3-204ENST00000323144 PSMD14O00487 310 aa15.91■□□□□ 0.14
TPM3-204ENST00000323144 DDX58O95786 925 aaKnown RBP15.91■□□□□ 0.14
TPM3-204ENST00000323144 CWF19L2Q2TBE0 894 aaKnown RBP15.91■□□□□ 0.14
TPM3-204ENST00000323144 MICALL2Q8IY33 904 aa15.91■□□□□ 0.14
TPM3-204ENST00000323144 TNS4Q8IZW8 715 aa15.91■□□□□ 0.14
TPM3-204ENST00000323144 TBC1D16Q8TBP0 767 aa15.91■□□□□ 0.14
TPM3-204ENST00000323144 BCL2L13Q9BXK5 485 aa15.91■□□□□ 0.14
TPM3-204ENST00000323144 GLIS2Q9BZE0 524 aaPredicted RBP15.91■□□□□ 0.14
TPM3-204ENST00000323144 PI4KAP2A4QPH2 592 aa15.9■□□□□ 0.14
TPM3-204ENST00000323144 UFL1O94874 794 aa15.9■□□□□ 0.14
TPM3-204ENST00000323144 EGFRP00533 1210 aa15.9■□□□□ 0.14
TPM3-204ENST00000323144 HIRAP54198 1017 aaPredicted RBP15.9■□□□□ 0.14
TPM3-204ENST00000323144 CTSWP56202 376 aa15.9■□□□□ 0.14
TPM3-204ENST00000323144 DOK7Q18PE1 504 aa15.9■□□□□ 0.14
TPM3-204ENST00000323144 WASHC4Q2M389 1173 aa15.9■□□□□ 0.14
TPM3-204ENST00000323144 PI4KAP1Q8N8J0 262 aa15.9■□□□□ 0.14
TPM3-204ENST00000323144 KCNQ5Q9NR82 932 aa15.9■□□□□ 0.14
TPM3-204ENST00000323144 IL16Q14005 1332 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms