RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 CCDC152Q4G0S7 254 aa23.7■■□□□ 1.38
CIRBP-201ENST00000320936 GRAPLQ8TC17 118 aaPredicted RBP23.7■■□□□ 1.38
CIRBP-201ENST00000320936 C7orf43Q8WVR3 580 aa23.7■■□□□ 1.38
CIRBP-201ENST00000320936 LMNB1P20700 586 aa23.69■■□□□ 1.38
CIRBP-201ENST00000320936 C9orf78Q9NZ63 289 aaPredicted RBP23.69■■□□□ 1.38
CIRBP-201ENST00000320936 NOB1Q9ULX3 412 aaKnown RBP23.69■■□□□ 1.38
CIRBP-201ENST00000320936 KIF16BQ96L93 1317 aa23.69■■□□□ 1.38
CIRBP-201ENST00000320936 SPEF2Q9C093 1822 aa23.68■■□□□ 1.38
CIRBP-201ENST00000320936 H7C1W4 665 aa23.68■■□□□ 1.38
CIRBP-201ENST00000320936 CTSWP56202 376 aa23.68■■□□□ 1.38
CIRBP-201ENST00000320936 RTKN2Q8IZC4 609 aa23.68■■□□□ 1.38
CIRBP-201ENST00000320936 ALDH1L1O75891 902 aa23.67■■□□□ 1.38
CIRBP-201ENST00000320936 CC2D2BQ6DHV5 1058 aa23.67■■□□□ 1.38
CIRBP-201ENST00000320936 DICER1Q9UPY3 1922 aaKnown RBP23.66■■□□□ 1.38
CIRBP-201ENST00000320936 BBOX1O75936 387 aa23.66■■□□□ 1.38
CIRBP-201ENST00000320936 ZNF526Q8TF50 670 aaPredicted RBP23.66■■□□□ 1.38
CIRBP-201ENST00000320936 GRM8O00222 908 aa23.65■■□□□ 1.38
CIRBP-201ENST00000320936 FKBP4Q02790 459 aaKnown RBP eCLIP23.65■■□□□ 1.38
CIRBP-201ENST00000320936 SLC51AQ86UW1 340 aa23.65■■□□□ 1.38
CIRBP-201ENST00000320936 ZNF784Q8NCA9 323 aaPredicted RBP23.65■■□□□ 1.38
CIRBP-201ENST00000320936 API5Q9BZZ5 524 aaKnown RBP23.65■■□□□ 1.38
CIRBP-201ENST00000320936 ATP6V0A2Q9Y487 856 aa23.65■■□□□ 1.38
CIRBP-201ENST00000320936 LTBP3Q9NS15 1303 aa23.65■■□□□ 1.38
CIRBP-201ENST00000320936 COL4A1P02462 1669 aa23.64■■□□□ 1.38
CIRBP-201ENST00000320936 FRAT1Q92837 279 aaPredicted RBP23.64■■□□□ 1.38
CIRBP-201ENST00000320936 CELF1Q92879 486 aaKnown RBP23.64■■□□□ 1.38
CIRBP-201ENST00000320936 YTHDC1Q96MU7 727 aaKnown RBP23.64■■□□□ 1.38
CIRBP-201ENST00000320936 SEC31BQ9NQW1 1179 aa23.64■■□□□ 1.38
CIRBP-201ENST00000320936 LRRC37AA6NMS7 1700 aa23.64■■□□□ 1.38
CIRBP-201ENST00000320936 BCAR3O75815 825 aa23.63■■□□□ 1.37
CIRBP-201ENST00000320936 TMC4Q7Z404 712 aa23.63■■□□□ 1.37
CIRBP-201ENST00000320936 ZNF277Q9NRM2 450 aaPredicted RBP23.63■■□□□ 1.37
CIRBP-201ENST00000320936 PRELPP51888 382 aa23.62■■□□□ 1.37
CIRBP-201ENST00000320936 BRPF1P55201 1214 aaPredicted RBP23.62■■□□□ 1.37
CIRBP-201ENST00000320936 CASP7P55210 303 aa23.62■■□□□ 1.37
CIRBP-201ENST00000320936 CHMP3Q9Y3E7 222 aa23.62■■□□□ 1.37
CIRBP-201ENST00000320936 RPS8P62241 208 aaKnown RBP23.61■■□□□ 1.37
CIRBP-201ENST00000320936 GRIPAP1Q4V328 841 aa23.61■■□□□ 1.37
CIRBP-201ENST00000320936 SP8Q8IXZ3 490 aa23.61■■□□□ 1.37
CIRBP-201ENST00000320936 TTLL11Q8NHH1 800 aa23.61■■□□□ 1.37
CIRBP-201ENST00000320936 GREM2Q9H772 168 aa23.61■■□□□ 1.37
CIRBP-201ENST00000320936 IPO8O15397 1037 aaKnown RBP23.6■■□□□ 1.37
CIRBP-201ENST00000320936 DPP8Q6V1X1 898 aaPredicted RBP23.6■■□□□ 1.37
CIRBP-201ENST00000320936 ANKRD18AQ8IVF6 992 aa23.6■■□□□ 1.37
CIRBP-201ENST00000320936 CDC5LQ99459 802 aaKnown RBP23.6■■□□□ 1.37
CIRBP-201ENST00000320936 PLA2G12BQ9BX93 195 aa23.6■■□□□ 1.37
CIRBP-201ENST00000320936 CCT4P50991 539 aaKnown RBP23.59■■□□□ 1.37
CIRBP-201ENST00000320936 FAM161AQ3B820 660 aa23.59■■□□□ 1.37
CIRBP-201ENST00000320936 PSMD1Q99460 953 aa23.59■■□□□ 1.37
CIRBP-201ENST00000320936 SNED1Q8TER0 1413 aa23.59■■□□□ 1.37
CIRBP-201ENST00000320936 MPNDQ8N594 471 aa23.59■■□□□ 1.37
CIRBP-201ENST00000320936 GPBP1L1Q9HC44 474 aaPredicted RBP23.59■■□□□ 1.37
CIRBP-201ENST00000320936 RTL9Q8NET4 1388 aa23.58■■□□□ 1.37
CIRBP-201ENST00000320936 IARSP41252 1262 aaKnown RBP23.58■■□□□ 1.36
CIRBP-201ENST00000320936 ARHGAP45Q92619 1136 aa23.58■■□□□ 1.36
CIRBP-201ENST00000320936 ZC3H4Q9UPT8 1303 aaKnown RBP23.57■■□□□ 1.36
CIRBP-201ENST00000320936 NBPF7P0C2Y1 421 aaPredicted RBP23.57■■□□□ 1.36
CIRBP-201ENST00000320936 ITGA6P23229 1130 aa23.57■■□□□ 1.36
CIRBP-201ENST00000320936 SUPT20HQ8NEM7 779 aa23.57■■□□□ 1.36
CIRBP-201ENST00000320936 FOXO4P98177 505 aa23.56■■□□□ 1.36
CIRBP-201ENST00000320936 ATF7IPQ6VMQ6 1270 aa23.56■■□□□ 1.36
CIRBP-201ENST00000320936 NSFL1CQ9UNZ2 370 aaKnown RBP23.56■■□□□ 1.36
CIRBP-201ENST00000320936 PPIP5K2O43314 1243 aa23.55■■□□□ 1.36
CIRBP-201ENST00000320936 TRIM27P14373 513 aa23.55■■□□□ 1.36
CIRBP-201ENST00000320936 IGHMBP2P38935 993 aaKnown RBP23.55■■□□□ 1.36
CIRBP-201ENST00000320936 ZKSCAN2Q63HK3 967 aa23.55■■□□□ 1.36
CIRBP-201ENST00000320936 LMBR1LQ6UX01 489 aa23.55■■□□□ 1.36
CIRBP-201ENST00000320936 LARGE2Q8N3Y3 721 aa23.55■■□□□ 1.36
CIRBP-201ENST00000320936 CLUAP1Q96AJ1 413 aa23.55■■□□□ 1.36
CIRBP-201ENST00000320936 SUCLG2Q96I99 432 aa23.55■■□□□ 1.36
CIRBP-201ENST00000320936 ANKIB1Q9P2G1 1089 aa23.55■■□□□ 1.36
CIRBP-201ENST00000320936 KDM2BQ8NHM5 1336 aa23.54■■□□□ 1.36
CIRBP-201ENST00000320936 ANKRD18BA2A2Z9 1011 aa23.54■■□□□ 1.36
CIRBP-201ENST00000320936 CSF1RP07333 972 aa23.54■■□□□ 1.36
CIRBP-201ENST00000320936 TAF7LQ5H9L4 462 aa23.54■■□□□ 1.36
CIRBP-201ENST00000320936 EPHA10Q5JZY3 1008 aa23.54■■□□□ 1.36
CIRBP-201ENST00000320936 JDP2Q8WYK2 163 aa23.54■■□□□ 1.36
CIRBP-201ENST00000320936 DUOX1Q9NRD9 1551 aa23.53■■□□□ 1.36
CIRBP-201ENST00000320936 UTYO14607 1347 aa23.53■■□□□ 1.36
CIRBP-201ENST00000320936 C6orf229H3BNL8 230 aa23.53■■□□□ 1.36
CIRBP-201ENST00000320936 GPSM2P81274 684 aa23.53■■□□□ 1.36
CIRBP-201ENST00000320936 IFIT5Q13325 482 aaKnown RBP23.53■■□□□ 1.36
CIRBP-201ENST00000320936 MPHOSPH8Q99549 860 aa23.53■■□□□ 1.36
CIRBP-201ENST00000320936 LTBP1Q14766 1721 aa23.52■■□□□ 1.36
CIRBP-201ENST00000320936 UBTFL1P0CB47 393 aaPredicted RBP23.52■■□□□ 1.36
CIRBP-201ENST00000320936 AOC3Q16853 763 aa23.52■■□□□ 1.36
CIRBP-201ENST00000320936 CCDC57Q2TAC2 916 aa23.52■■□□□ 1.36
CIRBP-201ENST00000320936 FTSJ3Q8IY81 847 aaKnown RBP23.52■■□□□ 1.36
CIRBP-201ENST00000320936 USP44Q9H0E7 712 aa23.52■■□□□ 1.36
CIRBP-201ENST00000320936 TNNQ9UQP3 1299 aa23.52■■□□□ 1.36
CIRBP-201ENST00000320936 NIM1KQ8IY84 436 aa23.51■■□□□ 1.35
CIRBP-201ENST00000320936 RTFDC1Q9BY42 306 aaPredicted RBP23.51■■□□□ 1.35
CIRBP-201ENST00000320936 BICC1Q9H694 974 aaKnown RBP23.51■■□□□ 1.35
CIRBP-201ENST00000320936 UFL1O94874 794 aa23.5■■□□□ 1.35
CIRBP-201ENST00000320936 DPY19L2Q6NUT2 758 aa23.5■■□□□ 1.35
CIRBP-201ENST00000320936 BSDC1Q9NW68 430 aaPredicted RBP23.5■■□□□ 1.35
CIRBP-201ENST00000320936 COL4A5P29400 1685 aa23.49■■□□□ 1.35
CIRBP-201ENST00000320936 INTS3Q68E01 1043 aaKnown RBP23.49■■□□□ 1.35
CIRBP-201ENST00000320936 GGA1Q9UJY5 639 aa23.49■■□□□ 1.35
CIRBP-201ENST00000320936 XDHP47989 1333 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms