RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CDC37L1Q7L3B6 337 aa19.18■□□□□ 0.66
PACS1-201ENST00000320580 ZSCAN16Q9H4T2 348 aaPredicted RBP19.18■□□□□ 0.66
PACS1-201ENST00000320580 PTPRCP08575 1304 aa19.17■□□□□ 0.66
PACS1-201ENST00000320580 KRT32Q14532 448 aa19.17■□□□□ 0.66
PACS1-201ENST00000320580 KRT24Q2M2I5 525 aa19.17■□□□□ 0.66
PACS1-201ENST00000320580 RPGRIP1LQ68CZ1 1315 aa19.17■□□□□ 0.66
PACS1-201ENST00000320580 SIRT2Q8IXJ6 389 aa19.17■□□□□ 0.66
PACS1-201ENST00000320580 MKRN1Q9UHC7 482 aaKnown RBP19.17■□□□□ 0.66
PACS1-201ENST00000320580 NR1I2O75469 434 aa19.17■□□□□ 0.66
PACS1-201ENST00000320580 CCT2P78371 535 aaKnown RBP19.17■□□□□ 0.66
PACS1-201ENST00000320580 LARP1Q6PKG0 1096 aaKnown RBP19.17■□□□□ 0.66
PACS1-201ENST00000320580 LZTFL1Q9NQ48 299 aa19.17■□□□□ 0.66
PACS1-201ENST00000320580 TDRD7Q8NHU6 1098 aaKnown RBP19.16■□□□□ 0.66
PACS1-201ENST00000320580 NEO1Q92859 1461 aa19.16■□□□□ 0.66
PACS1-201ENST00000320580 OTUD6BQ8N6M0 293 aa19.16■□□□□ 0.66
PACS1-201ENST00000320580 USP27XA6NNY8 438 aa19.16■□□□□ 0.66
PACS1-201ENST00000320580 WDHD1O75717 1129 aaPredicted RBP19.16■□□□□ 0.66
PACS1-201ENST00000320580 GPR161Q8N6U8 529 aaKnown RBP19.16■□□□□ 0.66
PACS1-201ENST00000320580 ZNF526Q8TF50 670 aaPredicted RBP19.16■□□□□ 0.66
PACS1-201ENST00000320580 MRFAP1L1Q96HT8 127 aa19.16■□□□□ 0.66
PACS1-201ENST00000320580 LIG3P49916 1009 aa19.16■□□□□ 0.66
PACS1-201ENST00000320580 CEP112Q8N8E3 955 aa19.16■□□□□ 0.66
PACS1-201ENST00000320580 MICALCLQ6ZW33 695 aa19.15■□□□□ 0.66
PACS1-201ENST00000320580 RBM8AQ9Y5S9 174 aaKnown RBP19.15■□□□□ 0.66
PACS1-201ENST00000320580 EMILIN1Q9Y6C2 1016 aa19.15■□□□□ 0.66
PACS1-201ENST00000320580 BRD2P25440 801 aaKnown RBP19.15■□□□□ 0.66
PACS1-201ENST00000320580 HDGFL1Q5TGJ6 251 aa19.15■□□□□ 0.66
PACS1-201ENST00000320580 VPS53Q5VIR6 699 aa19.15■□□□□ 0.66
PACS1-201ENST00000320580 RALYLQ86SE5 291 aaKnown RBP19.15■□□□□ 0.66
PACS1-201ENST00000320580 SLFNL1Q499Z3 407 aa19.15■□□□□ 0.66
PACS1-201ENST00000320580 FBXO18Q8NFZ0 1043 aa19.15■□□□□ 0.66
PACS1-201ENST00000320580 MRPS27Q92552 414 aaKnown RBP19.15■□□□□ 0.66
PACS1-201ENST00000320580 EFCAB8A8MWE9 144 aa19.14■□□□□ 0.66
PACS1-201ENST00000320580 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.14■□□□□ 0.66
PACS1-201ENST00000320580 DACH1Q9UI36 760 aa19.14■□□□□ 0.66
PACS1-201ENST00000320580 POLR3DP05423 398 aaPredicted RBP19.14■□□□□ 0.65
PACS1-201ENST00000320580 MCM3P25205 808 aa19.14■□□□□ 0.65
PACS1-201ENST00000320580 GBP2P32456 591 aaPredicted RBP19.14■□□□□ 0.65
PACS1-201ENST00000320580 CHMP4BP1P59074 171 aa19.14■□□□□ 0.65
PACS1-201ENST00000320580 AFAP1L1Q8TED9 768 aa19.14■□□□□ 0.65
PACS1-201ENST00000320580 BOLA2Q9H3K6 86 aa19.14■□□□□ 0.65
PACS1-201ENST00000320580 PDE11AQ9HCR9 933 aa19.14■□□□□ 0.65
PACS1-201ENST00000320580 CCDC158Q5M9N0 1113 aa19.14■□□□□ 0.65
PACS1-201ENST00000320580 PHACTR3Q96KR7 559 aa19.14■□□□□ 0.65
PACS1-201ENST00000320580 INPP5BP32019 993 aa19.14■□□□□ 0.65
PACS1-201ENST00000320580 ERC1Q8IUD2 1116 aa19.14■□□□□ 0.65
PACS1-201ENST00000320580 THEMISQ8N1K5 641 aaPredicted RBP19.14■□□□□ 0.65
PACS1-201ENST00000320580 XPO4Q9C0E2 1151 aaKnown RBP19.14■□□□□ 0.65
PACS1-201ENST00000320580 KLHL10Q6JEL2 608 aa19.13■□□□□ 0.65
PACS1-201ENST00000320580 RBM33Q96EV2 1170 aaKnown RBP19.13■□□□□ 0.65
PACS1-201ENST00000320580 GOLGA6L10A6NI86 522 aa19.13■□□□□ 0.65
PACS1-201ENST00000320580 HSPA4P34932 840 aa19.13■□□□□ 0.65
PACS1-201ENST00000320580 SAFBQ15424 915 aaKnown RBP eCLIP19.13■□□□□ 0.65
PACS1-201ENST00000320580 EXOC4Q96A65 974 aa19.13■□□□□ 0.65
PACS1-201ENST00000320580 PPP1R13BQ96KQ4 1090 aa19.13■□□□□ 0.65
PACS1-201ENST00000320580 IMPACTQ9P2X3 320 aa19.13■□□□□ 0.65
PACS1-201ENST00000320580 CCDC181Q5TID7 509 aa19.12■□□□□ 0.65
PACS1-201ENST00000320580 RHPN1Q8TCX5 695 aa19.12■□□□□ 0.65
PACS1-201ENST00000320580 LRRC2Q9BYS8 371 aa19.12■□□□□ 0.65
PACS1-201ENST00000320580 ADAM21Q9UKJ8 722 aa19.12■□□□□ 0.65
PACS1-201ENST00000320580 GOLGA6L7A0A1B0GV03 622 aa19.12■□□□□ 0.65
PACS1-201ENST00000320580 TRDNQ13061 729 aa19.12■□□□□ 0.65
PACS1-201ENST00000320580 CCDC144BQ3MJ40 725 aa19.12■□□□□ 0.65
PACS1-201ENST00000320580 NFXL1Q6ZNB6 911 aa19.12■□□□□ 0.65
PACS1-201ENST00000320580 CCDC144CPQ8IYA2 1237 aa19.12■□□□□ 0.65
PACS1-201ENST00000320580 ZNF622Q969S3 477 aaKnown RBP eCLIP19.12■□□□□ 0.65
PACS1-201ENST00000320580 RGS12O14924 1447 aa19.12■□□□□ 0.65
PACS1-201ENST00000320580 MPHOSPH8Q99549 860 aa19.12■□□□□ 0.65
PACS1-201ENST00000320580 NCAPGQ9BPX3 1015 aa19.12■□□□□ 0.65
PACS1-201ENST00000320580 PLEKHA4Q9H4M7 779 aa19.12■□□□□ 0.65
PACS1-201ENST00000320580 PPP1R42Q7Z4L9 355 aa19.11■□□□□ 0.65
PACS1-201ENST00000320580 ODF2Q5BJF6 829 aa19.11■□□□□ 0.65
PACS1-201ENST00000320580 RUFY3Q7L099 469 aa19.11■□□□□ 0.65
PACS1-201ENST00000320580 NEUROD6Q96NK8 337 aa19.11■□□□□ 0.65
PACS1-201ENST00000320580 A0A087WWV3 80 aa19.11■□□□□ 0.65
PACS1-201ENST00000320580 ST5P78524 1137 aa19.11■□□□□ 0.65
PACS1-201ENST00000320580 ATP2C2O75185 946 aa19.11■□□□□ 0.65
PACS1-201ENST00000320580 MAGEA9P43362 315 aa19.11■□□□□ 0.65
PACS1-201ENST00000320580 ZNF569Q5MCW4 686 aa19.11■□□□□ 0.65
PACS1-201ENST00000320580 C14orf93Q9H972 538 aaKnown RBP19.11■□□□□ 0.65
PACS1-201ENST00000320580 NSD2O96028 1365 aa19.11■□□□□ 0.65
PACS1-201ENST00000320580 A0A1B0GVL5 298 aa19.1■□□□□ 0.65
PACS1-201ENST00000320580 ATP8B1O43520 1251 aa19.1■□□□□ 0.65
PACS1-201ENST00000320580 CCDC175P0C221 793 aa19.1■□□□□ 0.65
PACS1-201ENST00000320580 ORC3Q9UBD5 711 aaPredicted RBP19.1■□□□□ 0.65
PACS1-201ENST00000320580 CDK19Q9BWU1 502 aa19.1■□□□□ 0.65
PACS1-201ENST00000320580 MAST1Q9Y2H9 1570 aa19.1■□□□□ 0.65
PACS1-201ENST00000320580 SARNPP82979 210 aaKnown RBP19.1■□□□□ 0.65
PACS1-201ENST00000320580 TMEM87AQ8NBN3 555 aa19.1■□□□□ 0.65
PACS1-201ENST00000320580 BAG1Q99933 345 aaPredicted RBP19.1■□□□□ 0.65
PACS1-201ENST00000320580 RIMBP3CA6NJZ7 1639 aa19.1■□□□□ 0.65
PACS1-201ENST00000320580 RIMBP3BA6NNM3 1639 aa19.1■□□□□ 0.65
PACS1-201ENST00000320580 RIMBP3Q9UFD9 1639 aa19.1■□□□□ 0.65
PACS1-201ENST00000320580 MSH6P52701 1360 aa19.09■□□□□ 0.65
PACS1-201ENST00000320580 EIF5P55010 431 aaKnown RBP19.09■□□□□ 0.65
PACS1-201ENST00000320580 KIAA1328Q86T90 577 aa19.09■□□□□ 0.65
PACS1-201ENST00000320580 C8orf76Q96K31 380 aa19.09■□□□□ 0.65
PACS1-201ENST00000320580 RTL1A6NKG5 1358 aa19.09■□□□□ 0.65
PACS1-201ENST00000320580 CTAGE9A4FU28 777 aa19.09■□□□□ 0.65
PACS1-201ENST00000320580 LONRF2Q1L5Z9 754 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms