RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 RNMTO43148 476 aaKnown RBP19.16■□□□□ 0.66
CLIP4-201ENST00000320081 MCMDC2Q4G0Z9 681 aa19.16■□□□□ 0.66
CLIP4-201ENST00000320081 ZFYVE27Q5T4F4 411 aa19.16■□□□□ 0.66
CLIP4-201ENST00000320081 UBXN4Q92575 508 aa19.16■□□□□ 0.66
CLIP4-201ENST00000320081 DDX19AQ9NUU7 478 aaKnown RBP19.16■□□□□ 0.66
CLIP4-201ENST00000320081 TMEM63CQ9P1W3 806 aa19.16■□□□□ 0.66
CLIP4-201ENST00000320081 SUCLG2Q96I99 432 aa19.16■□□□□ 0.66
CLIP4-201ENST00000320081 CCDC24Q8N4L8 307 aa19.15■□□□□ 0.66
CLIP4-201ENST00000320081 DEF6Q9H4E7 631 aa19.15■□□□□ 0.66
CLIP4-201ENST00000320081 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
CLIP4-201ENST00000320081 SNX14Q9Y5W7 946 aa19.15■□□□□ 0.66
CLIP4-201ENST00000320081 PTGS1P23219 599 aa19.15■□□□□ 0.66
CLIP4-201ENST00000320081 AFMP43652 599 aa19.15■□□□□ 0.66
CLIP4-201ENST00000320081 AXDND1Q5T1B0 1012 aaPredicted RBP19.15■□□□□ 0.66
CLIP4-201ENST00000320081 ZNF496Q96IT1 587 aaPredicted RBP19.15■□□□□ 0.66
CLIP4-201ENST00000320081 PAG1Q9NWQ8 432 aa19.15■□□□□ 0.66
CLIP4-201ENST00000320081 TOP1P11387 765 aaKnown RBP19.14■□□□□ 0.66
CLIP4-201ENST00000320081 ANAPC15P60006 121 aa19.14■□□□□ 0.66
CLIP4-201ENST00000320081 NOLC1Q14978 699 aaKnown RBP eCLIP19.14■□□□□ 0.66
CLIP4-201ENST00000320081 ARHGAP29Q52LW3 1261 aa19.14■□□□□ 0.66
CLIP4-201ENST00000320081 SIRT2Q8IXJ6 389 aa19.14■□□□□ 0.66
CLIP4-201ENST00000320081 PRAMEF22A3QJZ6 481 aa19.14■□□□□ 0.65
CLIP4-201ENST00000320081 NOM1Q5C9Z4 860 aaKnown RBP19.14■□□□□ 0.65
CLIP4-201ENST00000320081 SOGA3Q5TF21 947 aa19.14■□□□□ 0.65
CLIP4-201ENST00000320081 RUFY1Q96T51 708 aa19.14■□□□□ 0.65
CLIP4-201ENST00000320081 ALDH1L1O75891 902 aa19.14■□□□□ 0.65
CLIP4-201ENST00000320081 AOPEPQ8N6M6 819 aa19.14■□□□□ 0.65
CLIP4-201ENST00000320081 NOL7Q9UMY1 257 aaKnown RBP19.14■□□□□ 0.65
CLIP4-201ENST00000320081 JAK2O60674 1132 aa19.14■□□□□ 0.65
CLIP4-201ENST00000320081 SMARCE1Q969G3 411 aa19.14■□□□□ 0.65
CLIP4-201ENST00000320081 PUS7Q96PZ0 661 aaKnown RBP19.14■□□□□ 0.65
CLIP4-201ENST00000320081 SEC62Q99442 399 aaKnown RBP19.14■□□□□ 0.65
CLIP4-201ENST00000320081 STX8Q9UNK0 236 aa19.14■□□□□ 0.65
CLIP4-201ENST00000320081 ABCC2Q92887 1545 aa19.13■□□□□ 0.65
CLIP4-201ENST00000320081 HMGB1P09429 215 aaKnown RBP19.13■□□□□ 0.65
CLIP4-201ENST00000320081 EIF5P55010 431 aaKnown RBP19.13■□□□□ 0.65
CLIP4-201ENST00000320081 ZNF790Q6PG37 636 aa19.13■□□□□ 0.65
CLIP4-201ENST00000320081 MTERF4Q7Z6M4 381 aaKnown RBP19.13■□□□□ 0.65
CLIP4-201ENST00000320081 ZKSCAN5Q9Y2L8 839 aa19.13■□□□□ 0.65
CLIP4-201ENST00000320081 CCDC171Q6TFL3 1326 aa19.13■□□□□ 0.65
CLIP4-201ENST00000320081 MPHOSPH10O00566 681 aaKnown RBP19.13■□□□□ 0.65
CLIP4-201ENST00000320081 CAVIN4Q5BKX8 364 aa19.13■□□□□ 0.65
CLIP4-201ENST00000320081 A0A1B0GVL5 298 aa19.13■□□□□ 0.65
CLIP4-201ENST00000320081 POLR3GO15318 223 aaPredicted RBP19.13■□□□□ 0.65
CLIP4-201ENST00000320081 TYRO3Q06418 890 aa19.13■□□□□ 0.65
CLIP4-201ENST00000320081 DZIP1Q86YF9 867 aaKnown RBP19.13■□□□□ 0.65
CLIP4-201ENST00000320081 NCOA7Q8NI08 942 aa19.13■□□□□ 0.65
CLIP4-201ENST00000320081 IP6K1Q92551 441 aa19.13■□□□□ 0.65
CLIP4-201ENST00000320081 ALG1Q9BT22 464 aa19.12■□□□□ 0.65
CLIP4-201ENST00000320081 EIF2AK4Q9P2K8 1649 aaKnown RBP19.12■□□□□ 0.65
CLIP4-201ENST00000320081 YEATS2Q9ULM3 1422 aa19.12■□□□□ 0.65
CLIP4-201ENST00000320081 CENPHQ9H3R5 247 aa19.12■□□□□ 0.65
CLIP4-201ENST00000320081 DDX21Q9NR30 783 aaKnown RBP eCLIP19.12■□□□□ 0.65
CLIP4-201ENST00000320081 ATP10AO60312 1499 aa19.12■□□□□ 0.65
CLIP4-201ENST00000320081 SGSM2O43147 1006 aa19.11■□□□□ 0.65
CLIP4-201ENST00000320081 PRC1O43663 620 aa19.11■□□□□ 0.65
CLIP4-201ENST00000320081 SLC5A1P13866 664 aa19.11■□□□□ 0.65
CLIP4-201ENST00000320081 MCM5P33992 734 aa19.11■□□□□ 0.65
CLIP4-201ENST00000320081 PROSER3Q2NL68 480 aa19.11■□□□□ 0.65
CLIP4-201ENST00000320081 CTCFLQ8NI51 663 aaPredicted RBP19.11■□□□□ 0.65
CLIP4-201ENST00000320081 PODXL2Q9NZ53 605 aa19.11■□□□□ 0.65
CLIP4-201ENST00000320081 PTPDC1A2A3K4 754 aa19.11■□□□□ 0.65
CLIP4-201ENST00000320081 CT47A1Q5JQC4 288 aaPredicted RBP19.11■□□□□ 0.65
CLIP4-201ENST00000320081 PPP4R3BQ5MIZ7 849 aa19.11■□□□□ 0.65
CLIP4-201ENST00000320081 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.11■□□□□ 0.65
CLIP4-201ENST00000320081 ERVK-7P63135 1459 aa19.11■□□□□ 0.65
CLIP4-201ENST00000320081 IQCA1Q86XH1 822 aa19.11■□□□□ 0.65
CLIP4-201ENST00000320081 KIF18AQ8NI77 898 aa19.11■□□□□ 0.65
CLIP4-201ENST00000320081 SSRP1Q08945 709 aaKnown RBP19.11■□□□□ 0.65
CLIP4-201ENST00000320081 LMBRD1Q9NUN5 540 aa19.11■□□□□ 0.65
CLIP4-201ENST00000320081 ATP7AQ04656 1500 aa19.11■□□□□ 0.65
CLIP4-201ENST00000320081 SMTNL1A8MU46 457 aa19.1■□□□□ 0.65
CLIP4-201ENST00000320081 EPB41L2O43491 1005 aaKnown RBP19.1■□□□□ 0.65
CLIP4-201ENST00000320081 NLRP5P59047 1200 aa19.1■□□□□ 0.65
CLIP4-201ENST00000320081 PTH1RQ03431 593 aa19.1■□□□□ 0.65
CLIP4-201ENST00000320081 MFSD6Q6ZSS7 791 aa19.1■□□□□ 0.65
CLIP4-201ENST00000320081 FAM200AQ8TCP9 573 aa19.1■□□□□ 0.65
CLIP4-201ENST00000320081 RUFY3Q7L099 469 aa19.1■□□□□ 0.65
CLIP4-201ENST00000320081 NGLY1Q96IV0 654 aa19.1■□□□□ 0.65
CLIP4-201ENST00000320081 MYL10Q9BUA6 226 aa19.1■□□□□ 0.65
CLIP4-201ENST00000320081 MAST1Q9Y2H9 1570 aa19.1■□□□□ 0.65
CLIP4-201ENST00000320081 SKILP12757 684 aa19.1■□□□□ 0.65
CLIP4-201ENST00000320081 CADPS2Q86UW7 1296 aa19.1■□□□□ 0.65
CLIP4-201ENST00000320081 ZNHIT6Q9NWK9 470 aaKnown RBP19.1■□□□□ 0.65
CLIP4-201ENST00000320081 FBXO3Q9UK99 471 aa19.1■□□□□ 0.65
CLIP4-201ENST00000320081 ZFP91Q96JP5 570 aaPredicted RBP19.09■□□□□ 0.65
CLIP4-201ENST00000320081 HMG20BQ9P0W2 317 aa19.09■□□□□ 0.65
CLIP4-201ENST00000320081 RTL1A6NKG5 1358 aa19.09■□□□□ 0.65
CLIP4-201ENST00000320081 IDEP14735 1019 aa19.09■□□□□ 0.65
CLIP4-201ENST00000320081 SYKP43405 635 aa19.09■□□□□ 0.65
CLIP4-201ENST00000320081 STX17P56962 302 aa19.09■□□□□ 0.65
CLIP4-201ENST00000320081 ZPR1O75312 459 aa19.08■□□□□ 0.65
CLIP4-201ENST00000320081 METP08581 1390 aa19.08■□□□□ 0.65
CLIP4-201ENST00000320081 TSPY2A6NKD2 308 aa19.08■□□□□ 0.65
CLIP4-201ENST00000320081 ZBTB43O43298 467 aa19.08■□□□□ 0.65
CLIP4-201ENST00000320081 STX1AQ16623 288 aa19.08■□□□□ 0.65
CLIP4-201ENST00000320081 SPECC1Q5M775 1068 aa19.08■□□□□ 0.65
CLIP4-201ENST00000320081 EAF2Q96CJ1 260 aaPredicted RBP19.08■□□□□ 0.65
CLIP4-201ENST00000320081 A0A1B0GUL7 405 aa19.08■□□□□ 0.64
CLIP4-201ENST00000320081 KIF4BQ2VIQ3 1234 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms