RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 LARP6Q9BRS8 491 aaKnown RBP9.12□□□□□ -0.95
IFT88-201ENST00000319980 CCDC171Q6TFL3 1326 aa9.12□□□□□ -0.95
IFT88-201ENST00000319980 CYP2E1P05181 493 aaPredicted RBP9.12□□□□□ -0.95
IFT88-201ENST00000319980 CASTP20810 708 aaKnown RBP9.12□□□□□ -0.95
IFT88-201ENST00000319980 GPTP24298 496 aa9.12□□□□□ -0.95
IFT88-201ENST00000319980 CUL4AQ13619 759 aa9.12□□□□□ -0.95
IFT88-201ENST00000319980 FOXD4L5Q5VV16 416 aaPredicted RBP9.12□□□□□ -0.95
IFT88-201ENST00000319980 FOXD4L4Q8WXT5 416 aaPredicted RBP9.12□□□□□ -0.95
IFT88-201ENST00000319980 BCL9O00512 1426 aa9.12□□□□□ -0.95
IFT88-201ENST00000319980 ARFGEF2Q9Y6D5 1785 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 CYP19A1P11511 503 aaPredicted RBP9.11□□□□□ -0.95
IFT88-201ENST00000319980 IL15P40933 162 aaPredicted RBP9.11□□□□□ -0.95
IFT88-201ENST00000319980 HLFQ16534 295 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 CCDC57Q2TAC2 916 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 ADCK5Q3MIX3 580 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 MCTP1Q6DN14 999 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 CLEC17AQ6ZS10 378 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 PUS3Q9BZE2 481 aaKnown RBP9.11□□□□□ -0.95
IFT88-201ENST00000319980 ZBTB1Q9Y2K1 713 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 RBM8AQ9Y5S9 174 aaKnown RBP9.11□□□□□ -0.95
IFT88-201ENST00000319980 AFF2P51816 1311 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 SHANK3Q9BYB0 1731 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 LAMB4A4D0S4 1761 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 EYA2O00167 538 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 ZKSCAN1P17029 563 aaPredicted RBP9.11□□□□□ -0.95
IFT88-201ENST00000319980 RBM6P78332 1123 aaKnown RBP9.11□□□□□ -0.95
IFT88-201ENST00000319980 TRIM28Q13263 835 aaKnown RBP9.11□□□□□ -0.95
IFT88-201ENST00000319980 NECTIN1Q15223 517 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 DDB1Q16531 1140 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 GIGYF2Q6Y7W6 1299 aaKnown RBP9.11□□□□□ -0.95
IFT88-201ENST00000319980 SYNE4Q8N205 404 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 MAP4K1Q92918 833 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 JAKMIP1Q96N16 626 aaKnown RBP9.11□□□□□ -0.95
IFT88-201ENST00000319980 ZDHHC9Q9Y397 364 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 UBR2Q8IWV8 1755 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 CHGBP05060 677 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 AK2P54819 239 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 DDX46Q7L014 1031 aaKnown RBP9.11□□□□□ -0.95
IFT88-201ENST00000319980 ZNF589Q86UQ0 364 aaPredicted RBP9.11□□□□□ -0.95
IFT88-201ENST00000319980 INTS4Q96HW7 963 aaKnown RBP9.11□□□□□ -0.95
IFT88-201ENST00000319980 TTC14Q96N46 770 aa9.11□□□□□ -0.95
IFT88-201ENST00000319980 MAP3K15Q6ZN16 1313 aa9.1□□□□□ -0.95
IFT88-201ENST00000319980 BRWD3Q6RI45 1802 aa9.1□□□□□ -0.95
IFT88-201ENST00000319980 ZBTB38Q8NAP3 1195 aaPredicted RBP9.1□□□□□ -0.95
IFT88-201ENST00000319980 ACSBG1Q96GR2 724 aa9.1□□□□□ -0.95
IFT88-201ENST00000319980 TBC1D2BQ9UPU7 963 aa9.1□□□□□ -0.95
IFT88-201ENST00000319980 KAT6BQ8WYB5 2073 aa9.1□□□□□ -0.95
IFT88-201ENST00000319980 TOGARAM1Q9Y4F4 1720 aa9.1□□□□□ -0.95
IFT88-201ENST00000319980 RXRBP28702 533 aa9.1□□□□□ -0.95
IFT88-201ENST00000319980 SKOR2Q2VWA4 1001 aaPredicted RBP9.1□□□□□ -0.95
IFT88-201ENST00000319980 CREB3L3Q68CJ9 461 aa9.1□□□□□ -0.95
IFT88-201ENST00000319980 HAUS7Q99871 368 aa9.1□□□□□ -0.95
IFT88-201ENST00000319980 SPATA31A1Q5TZJ5 1347 aa9.1□□□□□ -0.95
IFT88-201ENST00000319980 A0A1B0GUL7 405 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 PCCAP05165 728 aaPredicted RBP9.09□□□□□ -0.95
IFT88-201ENST00000319980 PTMSP20962 102 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 PAPPAQ13219 1627 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 TAF7LQ5H9L4 462 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 RUFY3Q7L099 469 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 CHAMP1Q96JM3 812 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 WNK3Q9BYP7 1800 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 CEP126Q9P2H0 1117 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 BRPF3Q9ULD4 1205 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 AFDNP55196 1824 aaKnown RBP9.09□□□□□ -0.95
IFT88-201ENST00000319980 GOLGA6L3A6NEY3 463 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 NLRP10Q86W26 655 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 IL27Q8NEV9 243 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 SEC62Q99442 399 aaKnown RBP9.09□□□□□ -0.95
IFT88-201ENST00000319980 CDCA7Q9BWT1 371 aaPredicted RBP9.09□□□□□ -0.95
IFT88-201ENST00000319980 SNRKQ9NRH2 765 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 LIMCH1Q9UPQ0 1083 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 CYP46A1Q9Y6A2 500 aa9.09□□□□□ -0.95
IFT88-201ENST00000319980 DDX49Q9Y6V7 483 aaKnown RBP9.09□□□□□ -0.95
IFT88-201ENST00000319980 GOLIM4O00461 696 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 ONECUT3O60422 494 aaPredicted RBP9.08□□□□□ -0.96
IFT88-201ENST00000319980 IFIT5Q13325 482 aaKnown RBP9.08□□□□□ -0.96
IFT88-201ENST00000319980 ZSWIM6Q9HCJ5 1215 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 GPR108Q9NPR9 543 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 PDRG1Q9NUG6 133 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 RGPD3A6NKT7 1758 aaPredicted RBP9.08□□□□□ -0.96
IFT88-201ENST00000319980 RGPD4Q7Z3J3 1758 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 SLC27A2O14975 620 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 TAF5LO75529 589 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 CIAO1O76071 339 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 RNF20Q5VTR2 975 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 DZIP3Q86Y13 1208 aaKnown RBP9.08□□□□□ -0.96
IFT88-201ENST00000319980 KCNB2Q92953 911 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 TRMT112Q9UI30 125 aaKnown RBP9.08□□□□□ -0.96
IFT88-201ENST00000319980 THRAP3Q9Y2W1 955 aaKnown RBP9.08□□□□□ -0.96
IFT88-201ENST00000319980 AK9Q5TCS8 1911 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 HSP90AB3PQ58FF7 597 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 MEX3CQ5U5Q3 659 aaKnown RBP9.08□□□□□ -0.96
IFT88-201ENST00000319980 VPS53Q5VIR6 699 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 CCDC129Q6ZRS4 1044 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 MARCH10Q8NA82 808 aaPredicted RBP9.08□□□□□ -0.96
IFT88-201ENST00000319980 KBTBD3Q8NAB2 608 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 TM6SF1Q9BZW5 370 aa9.08□□□□□ -0.96
IFT88-201ENST00000319980 TRPC5Q9UL62 973 aaPredicted RBP9.08□□□□□ -0.96
IFT88-201ENST00000319980 MED23Q9ULK4 1368 aa9.07□□□□□ -0.96
IFT88-201ENST00000319980 PRPF40AO75400 957 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms