RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 ADCY9O60503 1353 aa11.36□□□□□ -0.59
RPGR-201ENST00000318842 REREQ9P2R6 1566 aa11.36□□□□□ -0.59
RPGR-201ENST00000318842 POLR3DP05423 398 aaPredicted RBP11.35□□□□□ -0.59
RPGR-201ENST00000318842 HAP1P54257 671 aaPredicted RBP11.35□□□□□ -0.59
RPGR-201ENST00000318842 KLHL34Q8N239 644 aa11.35□□□□□ -0.59
RPGR-201ENST00000318842 ZNF446Q9NWS9 450 aa11.35□□□□□ -0.59
RPGR-201ENST00000318842 ERBB3P21860 1342 aa11.35□□□□□ -0.59
RPGR-201ENST00000318842 GOLGA6L6A8MZA4 724 aa11.35□□□□□ -0.59
RPGR-201ENST00000318842 ATP5J2-PTCD1G3V325 749 aa11.35□□□□□ -0.59
RPGR-201ENST00000318842 POLR3GO15318 223 aaPredicted RBP11.35□□□□□ -0.59
RPGR-201ENST00000318842 PTCD1O75127 700 aaKnown RBP11.35□□□□□ -0.59
RPGR-201ENST00000318842 PLA2G4DQ86XP0 818 aa11.35□□□□□ -0.59
RPGR-201ENST00000318842 CCDC85AQ96PX6 553 aaPredicted RBP11.35□□□□□ -0.59
RPGR-201ENST00000318842 EIF4A1P60842 406 aaKnown RBP11.35□□□□□ -0.59
RPGR-201ENST00000318842 CCAR1Q8IX12 1150 aaKnown RBP11.35□□□□□ -0.59
RPGR-201ENST00000318842 KIF18AQ8NI77 898 aa11.35□□□□□ -0.59
RPGR-201ENST00000318842 USP28Q96RU2 1077 aa11.35□□□□□ -0.59
RPGR-201ENST00000318842 BTBD11A6QL63 1104 aa11.34□□□□□ -0.59
RPGR-201ENST00000318842 SEC31AO94979 1220 aaKnown RBP11.34□□□□□ -0.59
RPGR-201ENST00000318842 SLFN14P0C7P3 912 aa11.34□□□□□ -0.59
RPGR-201ENST00000318842 HAND2P61296 217 aa11.34□□□□□ -0.59
RPGR-201ENST00000318842 UTP14CQ5TAP6 766 aaKnown RBP11.34□□□□□ -0.59
RPGR-201ENST00000318842 TTLL5Q6EMB2 1281 aa11.34□□□□□ -0.59
RPGR-201ENST00000318842 STOX1Q6ZVD7 989 aa11.34□□□□□ -0.59
RPGR-201ENST00000318842 LRRC8AQ8IWT6 810 aa11.34□□□□□ -0.59
RPGR-201ENST00000318842 CLSTN2Q9H4D0 955 aa11.34□□□□□ -0.59
RPGR-201ENST00000318842 ZCCHC17Q9NP64 241 aaKnown RBP11.34□□□□□ -0.59
RPGR-201ENST00000318842 LETM1O95202 739 aaPredicted RBP11.34□□□□□ -0.59
RPGR-201ENST00000318842 GTF2E1P29083 439 aaPredicted RBP11.34□□□□□ -0.59
RPGR-201ENST00000318842 RBM6P78332 1123 aaKnown RBP11.34□□□□□ -0.59
RPGR-201ENST00000318842 SCRN1Q12765 414 aa11.34□□□□□ -0.59
RPGR-201ENST00000318842 SYT10Q6XYQ8 523 aa11.34□□□□□ -0.59
RPGR-201ENST00000318842 ESF1Q9H501 851 aaKnown RBP11.34□□□□□ -0.59
RPGR-201ENST00000318842 TUBGCP6Q96RT7 1819 aa11.34□□□□□ -0.59
RPGR-201ENST00000318842 IGSF1Q8N6C5 1336 aa11.33□□□□□ -0.59
RPGR-201ENST00000318842 BECN2A8MW95 431 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 GOLGA6L19H0YKK7 550 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 SMC2O95347 1197 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 ME1P48163 572 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 RIMBP3CA6NJZ7 1639 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 RIMBP3BA6NNM3 1639 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 RIMBP3Q9UFD9 1639 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 OVOS2A0A0J9YW53 1432 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 USP6P35125 1406 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 OVOS2Q6IE36 1432 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 SSH2Q76I76 1423 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 TTC21AQ8NDW8 1320 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 RPS6KB1P23443 525 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 SMTNL1A8MU46 457 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 RXRAP19793 462 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 DPCR1Q3MIW9 517 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 ZNF530Q6P9A1 599 aaPredicted RBP11.33□□□□□ -0.6
RPGR-201ENST00000318842 MAP4K1Q92918 833 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 AMOTL2Q9Y2J4 779 aa11.33□□□□□ -0.6
RPGR-201ENST00000318842 UBE2Q2LH0YL09 131 aa11.32□□□□□ -0.6
RPGR-201ENST00000318842 ATP1A3P13637 1013 aa11.32□□□□□ -0.6
RPGR-201ENST00000318842 IQCB1Q15051 598 aa11.32□□□□□ -0.6
RPGR-201ENST00000318842 PTPN14Q15678 1187 aa11.32□□□□□ -0.6
RPGR-201ENST00000318842 ZSWIM4Q9H7M6 989 aa11.32□□□□□ -0.6
RPGR-201ENST00000318842 DENND2AQ9ULE3 1009 aa11.32□□□□□ -0.6
RPGR-201ENST00000318842 MAP3K5Q99683 1374 aa11.32□□□□□ -0.6
RPGR-201ENST00000318842 CYP21A2P08686 494 aa11.32□□□□□ -0.6
RPGR-201ENST00000318842 CHMP4AQ9BY43 222 aa11.32□□□□□ -0.6
RPGR-201ENST00000318842 DDX41Q9UJV9 622 aaKnown RBP11.32□□□□□ -0.6
RPGR-201ENST00000318842 FLT4P35916 1363 aa11.32□□□□□ -0.6
RPGR-201ENST00000318842 FANCGO15287 622 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 TFRCP02786 760 aaKnown RBP11.31□□□□□ -0.6
RPGR-201ENST00000318842 LMOD1P29536 600 aaPredicted RBP11.31□□□□□ -0.6
RPGR-201ENST00000318842 CCZ1BP86790 482 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 CCZ1P86791 482 aaPredicted RBP11.31□□□□□ -0.6
RPGR-201ENST00000318842 RESTQ13127 1097 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 TMC6Q7Z403 805 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 DHX40Q8IX18 779 aaKnown RBP11.31□□□□□ -0.6
RPGR-201ENST00000318842 FSIP1Q8NA03 581 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 DBNDD2Q9BQY9 259 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 GTPBP4Q9BZE4 634 aaKnown RBP11.31□□□□□ -0.6
RPGR-201ENST00000318842 SNRKQ9NRH2 765 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 CTDNEP1O95476 244 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 TFCP2Q12800 502 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 G3BP1Q13283 466 aaKnown RBP eCLIP11.31□□□□□ -0.6
RPGR-201ENST00000318842 CERS3Q8IU89 383 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 NEK11Q8NG66 645 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 NPHP4O75161 1426 aaPredicted RBP11.31□□□□□ -0.6
RPGR-201ENST00000318842 XRN1Q8IZH2 1706 aaKnown RBP11.31□□□□□ -0.6
RPGR-201ENST00000318842 NKX2-3Q8TAU0 364 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 RUFY2Q8WXA3 655 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 AIFM3Q96NN9 605 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 TMEM51Q9NW97 253 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 OGFRQ9NZT2 677 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 IFNKQ9P0W0 207 aa11.31□□□□□ -0.6
RPGR-201ENST00000318842 MARCKSP29966 332 aaPredicted RBP11.3□□□□□ -0.6
RPGR-201ENST00000318842 SPECC1Q5M775 1068 aa11.3□□□□□ -0.6
RPGR-201ENST00000318842 NBPF11Q86T75 865 aa11.3□□□□□ -0.6
RPGR-201ENST00000318842 TDRD7Q8NHU6 1098 aaKnown RBP11.3□□□□□ -0.6
RPGR-201ENST00000318842 EVI5LQ96CN4 794 aa11.3□□□□□ -0.6
RPGR-201ENST00000318842 CCDC34Q96HJ3 373 aa11.3□□□□□ -0.6
RPGR-201ENST00000318842 NEUROD6Q96NK8 337 aa11.3□□□□□ -0.6
RPGR-201ENST00000318842 SH2B1Q9NRF2 756 aaPredicted RBP11.3□□□□□ -0.6
RPGR-201ENST00000318842 DBNLQ9UJU6 430 aaKnown RBP11.3□□□□□ -0.6
RPGR-201ENST00000318842 TSPOAP1O95153 1857 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms