RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 USO1O60763 962 aaKnown RBP16.46■□□□□ 0.23
TRIM25-201ENST00000316881 TDRD12Q587J7 1177 aaKnown RBP16.46■□□□□ 0.23
TRIM25-201ENST00000316881 BICD1Q96G01 975 aa16.46■□□□□ 0.23
TRIM25-201ENST00000316881 KANK3Q6NY19 840 aa16.46■□□□□ 0.23
TRIM25-201ENST00000316881 KSR2Q6VAB6 950 aa16.46■□□□□ 0.23
TRIM25-201ENST00000316881 FAM114A1Q8IWE2 563 aa16.46■□□□□ 0.23
TRIM25-201ENST00000316881 CDCA7Q9BWT1 371 aaPredicted RBP16.46■□□□□ 0.23
TRIM25-201ENST00000316881 TOP1P11387 765 aaKnown RBP16.46■□□□□ 0.22
TRIM25-201ENST00000316881 CTNNA2P26232 953 aa16.46■□□□□ 0.22
TRIM25-201ENST00000316881 PICALMQ13492 652 aa16.46■□□□□ 0.22
TRIM25-201ENST00000316881 USP37Q86T82 979 aa16.46■□□□□ 0.22
TRIM25-201ENST00000316881 RHPN1Q8TCX5 695 aa16.46■□□□□ 0.22
TRIM25-201ENST00000316881 KIAA0754O94854 1291 aa16.45■□□□□ 0.22
TRIM25-201ENST00000316881 YEATS4O95619 227 aa16.45■□□□□ 0.22
TRIM25-201ENST00000316881 HSPA2P54652 639 aa16.45■□□□□ 0.22
TRIM25-201ENST00000316881 HOOK3Q86VS8 718 aa16.45■□□□□ 0.22
TRIM25-201ENST00000316881 GRM8O00222 908 aa16.45■□□□□ 0.22
TRIM25-201ENST00000316881 CCDC183Q5T5S1 534 aa16.45■□□□□ 0.22
TRIM25-201ENST00000316881 IFIT1BQ5T764 474 aaKnown RBP16.45■□□□□ 0.22
TRIM25-201ENST00000316881 LMBR1LQ6UX01 489 aa16.45■□□□□ 0.22
TRIM25-201ENST00000316881 CABLES1Q8TDN4 633 aa16.45■□□□□ 0.22
TRIM25-201ENST00000316881 ANKRD2Q9GZV1 360 aa16.45■□□□□ 0.22
TRIM25-201ENST00000316881 STK32BQ9NY57 414 aa16.45■□□□□ 0.22
TRIM25-201ENST00000316881 KIF2AO00139 706 aaPredicted RBP16.45■□□□□ 0.22
TRIM25-201ENST00000316881 CCDC91Q7Z6B0 441 aa16.45■□□□□ 0.22
TRIM25-201ENST00000316881 ZNF518AQ6AHZ1 1483 aa16.45■□□□□ 0.22
TRIM25-201ENST00000316881 FSIP1Q8NA03 581 aa16.45■□□□□ 0.22
TRIM25-201ENST00000316881 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
TRIM25-201ENST00000316881 BMP15O95972 392 aa16.44■□□□□ 0.22
TRIM25-201ENST00000316881 USP8P40818 1118 aa16.44■□□□□ 0.22
TRIM25-201ENST00000316881 ARHGAP45Q92619 1136 aa16.44■□□□□ 0.22
TRIM25-201ENST00000316881 FERMT1Q9BQL6 677 aa16.44■□□□□ 0.22
TRIM25-201ENST00000316881 PCDHB15Q9Y5E8 787 aa16.44■□□□□ 0.22
TRIM25-201ENST00000316881 NUP153P49790 1475 aaKnown RBP16.44■□□□□ 0.22
TRIM25-201ENST00000316881 PRKCSHP14314 528 aaPredicted RBP16.44■□□□□ 0.22
TRIM25-201ENST00000316881 IQSEC3Q9UPP2 1182 aaPredicted RBP16.44■□□□□ 0.22
TRIM25-201ENST00000316881 KIF5CO60282 957 aa16.44■□□□□ 0.22
TRIM25-201ENST00000316881 CTNNBL1Q8WYA6 563 aaPredicted RBP16.44■□□□□ 0.22
TRIM25-201ENST00000316881 NUP88Q99567 741 aaPredicted RBP16.44■□□□□ 0.22
TRIM25-201ENST00000316881 GSTTP1A0A1W2PQM5 241 aa16.44■□□□□ 0.22
TRIM25-201ENST00000316881 DCAF5Q96JK2 942 aa16.44■□□□□ 0.22
TRIM25-201ENST00000316881 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRIM25-201ENST00000316881 MACROD2A1Z1Q3 448 aa16.43■□□□□ 0.22
TRIM25-201ENST00000316881 FAM193AP78312 1265 aa16.43■□□□□ 0.22
TRIM25-201ENST00000316881 STX6O43752 255 aa16.43■□□□□ 0.22
TRIM25-201ENST00000316881 TNNI2P48788 182 aa16.43■□□□□ 0.22
TRIM25-201ENST00000316881 HDAC1Q13547 482 aaPredicted RBP16.43■□□□□ 0.22
TRIM25-201ENST00000316881 GBP3Q9H0R5 595 aa16.43■□□□□ 0.22
TRIM25-201ENST00000316881 DDX19AQ9NUU7 478 aaKnown RBP16.43■□□□□ 0.22
TRIM25-201ENST00000316881 NCKAP5LQ9HCH0 1330 aa16.43■□□□□ 0.22
TRIM25-201ENST00000316881 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
TRIM25-201ENST00000316881 RBM26Q5T8P6 1007 aaKnown RBP16.43■□□□□ 0.22
TRIM25-201ENST00000316881 PRC1O43663 620 aa16.43■□□□□ 0.22
TRIM25-201ENST00000316881 CA8P35219 290 aa16.43■□□□□ 0.22
TRIM25-201ENST00000316881 C8orf34Q49A92 452 aa16.43■□□□□ 0.22
TRIM25-201ENST00000316881 NUP160Q12769 1436 aa16.43■□□□□ 0.22
TRIM25-201ENST00000316881 SMARCC2Q8TAQ2 1214 aa16.42■□□□□ 0.22
TRIM25-201ENST00000316881 ZBTB43O43298 467 aa16.42■□□□□ 0.22
TRIM25-201ENST00000316881 FLT4P35916 1363 aa16.42■□□□□ 0.22
TRIM25-201ENST00000316881 NUCB1Q02818 461 aa16.42■□□□□ 0.22
TRIM25-201ENST00000316881 LUZP1Q86V48 1076 aa16.42■□□□□ 0.22
TRIM25-201ENST00000316881 PCDH11XQ9BZA7 1347 aa16.42■□□□□ 0.22
TRIM25-201ENST00000316881 PCDH11YQ9BZA8 1340 aa16.42■□□□□ 0.22
TRIM25-201ENST00000316881 PUF60Q9UHX1 559 aaKnown RBP16.42■□□□□ 0.22
TRIM25-201ENST00000316881 MAP3K9P80192 1104 aa16.41■□□□□ 0.22
TRIM25-201ENST00000316881 RBM17Q96I25 401 aaKnown RBP16.41■□□□□ 0.22
TRIM25-201ENST00000316881 GNAT2P19087 354 aa16.41■□□□□ 0.22
TRIM25-201ENST00000316881 PAFAH1B1P43034 410 aa16.41■□□□□ 0.22
TRIM25-201ENST00000316881 NCBP1Q09161 790 aaKnown RBP16.41■□□□□ 0.22
TRIM25-201ENST00000316881 MAGEB6P1A0A0J9YX57 407 aa16.41■□□□□ 0.22
TRIM25-201ENST00000316881 GJB2P29033 226 aa16.41■□□□□ 0.22
TRIM25-201ENST00000316881 TAF3Q5VWG9 929 aa16.41■□□□□ 0.22
TRIM25-201ENST00000316881 NFATC2IPQ8NCF5 419 aa16.41■□□□□ 0.22
TRIM25-201ENST00000316881 KLF18A0A0U1RQI7 1052 aa16.41■□□□□ 0.22
TRIM25-201ENST00000316881 CCDC172P0C7W6 258 aa16.41■□□□□ 0.22
TRIM25-201ENST00000316881 SLC9C2Q5TAH2 1124 aa16.41■□□□□ 0.22
TRIM25-201ENST00000316881 CCDC66A2RUB6 948 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 IRS4O14654 1257 aaPredicted RBP16.4■□□□□ 0.22
TRIM25-201ENST00000316881 GCP02774 474 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 UBXN4Q92575 508 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 PLS1Q14651 629 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 RBM27Q9P2N5 1060 aaKnown RBP16.4■□□□□ 0.22
TRIM25-201ENST00000316881 RBM25P49756 843 aaKnown RBP16.4■□□□□ 0.22
TRIM25-201ENST00000316881 RTN1Q16799 776 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 CCDC102BQ68D86 513 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 C6orf50Q9HD87 102 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 RMND1Q9NWS8 449 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 DUOX2Q9NRD8 1548 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 ATP10BO94823 1461 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 TTC22Q5TAA0 569 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 LINS1Q8NG48 757 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 EXOC1Q9NV70 894 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 EIF4A2Q14240 407 aaKnown RBP16.4■□□□□ 0.22
TRIM25-201ENST00000316881 COMMD10Q9Y6G5 202 aa16.4■□□□□ 0.22
TRIM25-201ENST00000316881 GNPATO15228 680 aa16.39■□□□□ 0.21
TRIM25-201ENST00000316881 RRP9O43818 475 aaKnown RBP16.39■□□□□ 0.21
TRIM25-201ENST00000316881 HEATR3Q7Z4Q2 680 aa16.39■□□□□ 0.21
TRIM25-201ENST00000316881 CRACR2AQ9BSW2 395 aa16.39■□□□□ 0.21
TRIM25-201ENST00000316881 BTG4Q9NY30 223 aa16.39■□□□□ 0.21
TRIM25-201ENST00000316881 MCMDC2Q4G0Z9 681 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms