RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 CEP126Q9P2H0 1117 aa16.74■□□□□ 0.27
VAMP2-201ENST00000316509 SPATA31A5Q5VU36 1347 aa16.74■□□□□ 0.27
VAMP2-201ENST00000316509 SPATA31A7Q8IWB4 1347 aa16.74■□□□□ 0.27
VAMP2-201ENST00000316509 RBM8AQ9Y5S9 174 aaKnown RBP16.74■□□□□ 0.27
VAMP2-201ENST00000316509 CYP46A1Q9Y6A2 500 aa16.74■□□□□ 0.27
VAMP2-201ENST00000316509 PRIM1P49642 420 aaKnown RBP16.73■□□□□ 0.27
VAMP2-201ENST00000316509 LRRFIP1Q32MZ4 808 aaKnown RBP16.73■□□□□ 0.27
VAMP2-201ENST00000316509 FAM227BQ96M60 508 aa16.73■□□□□ 0.27
VAMP2-201ENST00000316509 UPF3BQ9BZI7 483 aaKnown RBP16.73■□□□□ 0.27
VAMP2-201ENST00000316509 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.73■□□□□ 0.27
VAMP2-201ENST00000316509 NRAPQ86VF7 1730 aa16.73■□□□□ 0.27
VAMP2-201ENST00000316509 KCNJ4P48050 445 aa16.72■□□□□ 0.27
VAMP2-201ENST00000316509 KRT32Q14532 448 aa16.72■□□□□ 0.27
VAMP2-201ENST00000316509 USPL1Q5W0Q7 1092 aa16.72■□□□□ 0.27
VAMP2-201ENST00000316509 CREB3L3Q68CJ9 461 aa16.72■□□□□ 0.27
VAMP2-201ENST00000316509 PRPF40BQ6NWY9 871 aaKnown RBP16.72■□□□□ 0.27
VAMP2-201ENST00000316509 NLRP10Q86W26 655 aa16.72■□□□□ 0.27
VAMP2-201ENST00000316509 KBTBD3Q8NAB2 608 aa16.72■□□□□ 0.27
VAMP2-201ENST00000316509 SH2B1Q9NRF2 756 aaPredicted RBP16.72■□□□□ 0.27
VAMP2-201ENST00000316509 PALLDQ8WX93 1383 aa16.72■□□□□ 0.27
VAMP2-201ENST00000316509 SLC4A9Q96Q91 983 aa16.72■□□□□ 0.27
VAMP2-201ENST00000316509 HELLSQ9NRZ9 838 aa16.72■□□□□ 0.27
VAMP2-201ENST00000316509 BRD1O95696 1058 aa16.71■□□□□ 0.27
VAMP2-201ENST00000316509 IFIT5Q13325 482 aaKnown RBP16.71■□□□□ 0.27
VAMP2-201ENST00000316509 ANKRD1Q15327 319 aa16.71■□□□□ 0.27
VAMP2-201ENST00000316509 MCMDC2Q4G0Z9 681 aa16.71■□□□□ 0.27
VAMP2-201ENST00000316509 RUFY3Q7L099 469 aa16.71■□□□□ 0.27
VAMP2-201ENST00000316509 PDRG1Q9NUG6 133 aa16.71■□□□□ 0.27
VAMP2-201ENST00000316509 NWD2Q9ULI1 1742 aa16.71■□□□□ 0.27
VAMP2-201ENST00000316509 A0A0D9SFI3 127 aa16.71■□□□□ 0.27
VAMP2-201ENST00000316509 CASTP20810 708 aaKnown RBP16.71■□□□□ 0.27
VAMP2-201ENST00000316509 SMARCC1Q92922 1105 aaPredicted RBP16.71■□□□□ 0.27
VAMP2-201ENST00000316509 NEUROD6Q96NK8 337 aa16.71■□□□□ 0.27
VAMP2-201ENST00000316509 ZNF330Q9Y3S2 320 aaPredicted RBP16.71■□□□□ 0.27
VAMP2-201ENST00000316509 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
VAMP2-201ENST00000316509 ZNF609O15014 1411 aa16.71■□□□□ 0.26
VAMP2-201ENST00000316509 ABCC12Q96J65 1359 aa16.7■□□□□ 0.26
VAMP2-201ENST00000316509 SLIT2O94813 1529 aa16.7■□□□□ 0.26
VAMP2-201ENST00000316509 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
VAMP2-201ENST00000316509 SLC27A2O14975 620 aa16.7■□□□□ 0.26
VAMP2-201ENST00000316509 TAF5LO75529 589 aa16.7■□□□□ 0.26
VAMP2-201ENST00000316509 ADAMTS2O95450 1211 aa16.7■□□□□ 0.26
VAMP2-201ENST00000316509 AK2P54819 239 aa16.7■□□□□ 0.26
VAMP2-201ENST00000316509 KLHL40Q2TBA0 621 aa16.7■□□□□ 0.26
VAMP2-201ENST00000316509 SYTL4Q96C24 671 aaPredicted RBP16.7■□□□□ 0.26
VAMP2-201ENST00000316509 JAKMIP1Q96N16 626 aaKnown RBP16.7■□□□□ 0.26
VAMP2-201ENST00000316509 FSD2A1L4K1 749 aa16.7■□□□□ 0.26
VAMP2-201ENST00000316509 HSP90B1P14625 803 aaKnown RBP16.7■□□□□ 0.26
VAMP2-201ENST00000316509 LRRC24Q50LG9 513 aa16.7■□□□□ 0.26
VAMP2-201ENST00000316509 CCDC158Q5M9N0 1113 aa16.7■□□□□ 0.26
VAMP2-201ENST00000316509 ZDHHC9Q9Y397 364 aa16.7■□□□□ 0.26
VAMP2-201ENST00000316509 A0A1B0GUL7 405 aa16.69■□□□□ 0.26
VAMP2-201ENST00000316509 GOLGA6L3A6NEY3 463 aa16.69■□□□□ 0.26
VAMP2-201ENST00000316509 TAF7LQ5H9L4 462 aa16.69■□□□□ 0.26
VAMP2-201ENST00000316509 DZIP3Q86Y13 1208 aaKnown RBP16.69■□□□□ 0.26
VAMP2-201ENST00000316509 ZNF34Q8IZ26 560 aa16.69■□□□□ 0.26
VAMP2-201ENST00000316509 PAG1Q9NWQ8 432 aa16.69■□□□□ 0.26
VAMP2-201ENST00000316509 ZBTB1Q9Y2K1 713 aa16.69■□□□□ 0.26
VAMP2-201ENST00000316509 SPEF2Q9C093 1822 aa16.69■□□□□ 0.26
VAMP2-201ENST00000316509 RPAP1Q9BWH6 1393 aaPredicted RBP16.69■□□□□ 0.26
VAMP2-201ENST00000316509 WDR33Q9C0J8 1336 aaKnown RBP16.69■□□□□ 0.26
VAMP2-201ENST00000316509 PDE8AO60658 829 aa16.68■□□□□ 0.26
VAMP2-201ENST00000316509 EIF5P55010 431 aaKnown RBP16.68■□□□□ 0.26
VAMP2-201ENST00000316509 PIP4K2BP78356 416 aa16.68■□□□□ 0.26
VAMP2-201ENST00000316509 HLFQ16534 295 aa16.68■□□□□ 0.26
VAMP2-201ENST00000316509 CERKQ8TCT0 537 aa16.68■□□□□ 0.26
VAMP2-201ENST00000316509 FAM89AQ96GI7 184 aa16.68■□□□□ 0.26
VAMP2-201ENST00000316509 DNAJC2Q99543 621 aaKnown RBP16.68■□□□□ 0.26
VAMP2-201ENST00000316509 CICQ96RK0 1608 aaPredicted RBP16.68■□□□□ 0.26
VAMP2-201ENST00000316509 UBAP1LF5GYI3 381 aa16.68■□□□□ 0.26
VAMP2-201ENST00000316509 IFIT1P09914 478 aaKnown RBP16.68■□□□□ 0.26
VAMP2-201ENST00000316509 TIMM10P62072 90 aa16.68■□□□□ 0.26
VAMP2-201ENST00000316509 CCDC87Q9NVE4 849 aa16.68■□□□□ 0.26
VAMP2-201ENST00000316509 ANKRD18BA2A2Z9 1011 aa16.67■□□□□ 0.26
VAMP2-201ENST00000316509 TTLL11Q8NHH1 800 aa16.67■□□□□ 0.26
VAMP2-201ENST00000316509 ZNF594Q96JF6 807 aaPredicted RBP16.67■□□□□ 0.26
VAMP2-201ENST00000316509 ARXQ96QS3 562 aa16.67■□□□□ 0.26
VAMP2-201ENST00000316509 CTSWP56202 376 aa16.67■□□□□ 0.26
VAMP2-201ENST00000316509 MARCH10Q8NA82 808 aaPredicted RBP16.67■□□□□ 0.26
VAMP2-201ENST00000316509 ZNF512BQ96KM6 892 aaPredicted RBP16.67■□□□□ 0.26
VAMP2-201ENST00000316509 IRS4O14654 1257 aaPredicted RBP16.66■□□□□ 0.26
VAMP2-201ENST00000316509 RGL2O15211 777 aa16.66■□□□□ 0.26
VAMP2-201ENST00000316509 ZFYP08048 801 aaPredicted RBP16.66■□□□□ 0.26
VAMP2-201ENST00000316509 PARP10Q53GL7 1025 aa16.66■□□□□ 0.26
VAMP2-201ENST00000316509 MCTP1Q6DN14 999 aa16.66■□□□□ 0.26
VAMP2-201ENST00000316509 BLOC1S2Q6QNY1 142 aa16.66■□□□□ 0.26
VAMP2-201ENST00000316509 LMBRD1Q9NUN5 540 aa16.66■□□□□ 0.26
VAMP2-201ENST00000316509 TRMT112Q9UI30 125 aaKnown RBP16.66■□□□□ 0.26
VAMP2-201ENST00000316509 DOT1LQ8TEK3 1739 aa16.66■□□□□ 0.26
VAMP2-201ENST00000316509 ANKRD36CQ5JPF3 1778 aa16.66■□□□□ 0.26
VAMP2-201ENST00000316509 ADCK5Q3MIX3 580 aa16.65■□□□□ 0.26
VAMP2-201ENST00000316509 ZMYM1Q5SVZ6 1142 aa16.65■□□□□ 0.26
VAMP2-201ENST00000316509 INTS5Q6P9B9 1019 aaKnown RBP16.65■□□□□ 0.26
VAMP2-201ENST00000316509 DSCC1Q9BVC3 393 aa16.65■□□□□ 0.26
VAMP2-201ENST00000316509 PUS3Q9BZE2 481 aaKnown RBP16.65■□□□□ 0.26
VAMP2-201ENST00000316509 RIPOR2Q9Y4F9 1068 aa16.65■□□□□ 0.26
VAMP2-201ENST00000316509 DDX49Q9Y6V7 483 aaKnown RBP16.65■□□□□ 0.26
VAMP2-201ENST00000316509 LOC102724428A0A0B4J2F2 783 aa16.65■□□□□ 0.26
VAMP2-201ENST00000316509 RNF113AO15541 343 aaKnown RBP16.65■□□□□ 0.26
VAMP2-201ENST00000316509 MRE11P49959 708 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms