RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 GRAPLQ8TC17 118 aaPredicted RBP22.6■■□□□ 1.21
CCS-201ENST00000310190 SRCIN1Q9C0H9 1055 aa22.6■■□□□ 1.21
CCS-201ENST00000310190 LRRC37AA6NMS7 1700 aa22.6■■□□□ 1.21
CCS-201ENST00000310190 API5Q9BZZ5 524 aaKnown RBP22.59■■□□□ 1.21
CCS-201ENST00000310190 ATP6V0A2Q9Y487 856 aa22.59■■□□□ 1.21
CCS-201ENST00000310190 CSF1RP07333 972 aa22.58■■□□□ 1.21
CCS-201ENST00000310190 YY1P25490 414 aa22.58■■□□□ 1.21
CCS-201ENST00000310190 CCDC152Q4G0S7 254 aa22.58■■□□□ 1.21
CCS-201ENST00000310190 SP8Q8IXZ3 490 aa22.58■■□□□ 1.21
CCS-201ENST00000310190 PSMD1Q99460 953 aa22.58■■□□□ 1.21
CCS-201ENST00000310190 BCL2L13Q9BXK5 485 aa22.58■■□□□ 1.21
CCS-201ENST00000310190 GRM8O00222 908 aa22.57■■□□□ 1.2
CCS-201ENST00000310190 LMNB1P20700 586 aa22.57■■□□□ 1.2
CCS-201ENST00000310190 CTSWP56202 376 aa22.57■■□□□ 1.2
CCS-201ENST00000310190 UBE3BQ7Z3V4 1068 aa22.57■■□□□ 1.2
CCS-201ENST00000310190 TTLL11Q8NHH1 800 aa22.57■■□□□ 1.2
CCS-201ENST00000310190 NOB1Q9ULX3 412 aaKnown RBP22.57■■□□□ 1.2
CCS-201ENST00000310190 CCDC88AQ3V6T2 1871 aa22.57■■□□□ 1.2
CCS-201ENST00000310190 TAF1P21675 1872 aa22.56■■□□□ 1.2
CCS-201ENST00000310190 PPEF1O14829 653 aaPredicted RBP22.56■■□□□ 1.2
CCS-201ENST00000310190 IPO8O15397 1037 aaKnown RBP22.56■■□□□ 1.2
CCS-201ENST00000310190 VPS33BQ9H267 617 aa22.56■■□□□ 1.2
CCS-201ENST00000310190 CCT4P50991 539 aaKnown RBP22.55■■□□□ 1.2
CCS-201ENST00000310190 FKBP4Q02790 459 aaKnown RBP eCLIP22.55■■□□□ 1.2
CCS-201ENST00000310190 RTL5Q5HYW3 569 aaPredicted RBP22.55■■□□□ 1.2
CCS-201ENST00000310190 RTFDC1Q9BY42 306 aaPredicted RBP22.55■■□□□ 1.2
CCS-201ENST00000310190 TAOK3Q9H2K8 898 aa22.55■■□□□ 1.2
CCS-201ENST00000310190 PRELPP51888 382 aa22.54■■□□□ 1.2
CCS-201ENST00000310190 RPS8P62241 208 aaKnown RBP22.53■■□□□ 1.2
CCS-201ENST00000310190 SLC4A10Q6U841 1118 aa22.53■■□□□ 1.2
CCS-201ENST00000310190 LTBP1Q14766 1721 aa22.52■■□□□ 1.2
CCS-201ENST00000310190 FOXO4P98177 505 aa22.52■■□□□ 1.2
CCS-201ENST00000310190 C9orf131Q5VYM1 1079 aa22.52■■□□□ 1.2
CCS-201ENST00000310190 INTS3Q68E01 1043 aaKnown RBP22.52■■□□□ 1.2
CCS-201ENST00000310190 CELF1Q92879 486 aaKnown RBP22.52■■□□□ 1.2
CCS-201ENST00000310190 BCAR3O75815 825 aa22.51■■□□□ 1.19
CCS-201ENST00000310190 RASSF7Q02833 373 aa22.51■■□□□ 1.19
CCS-201ENST00000310190 ATF7IPQ6VMQ6 1270 aa22.51■■□□□ 1.19
CCS-201ENST00000310190 JARID2Q92833 1246 aaPredicted RBP22.51■■□□□ 1.19
CCS-201ENST00000310190 USP44Q9H0E7 712 aa22.51■■□□□ 1.19
CCS-201ENST00000310190 C9orf78Q9NZ63 289 aaPredicted RBP22.51■■□□□ 1.19
CCS-201ENST00000310190 COL4A1P02462 1669 aa22.51■■□□□ 1.19
CCS-201ENST00000310190 PODXL2Q9NZ53 605 aa22.5■■□□□ 1.19
CCS-201ENST00000310190 RABL6Q3YEC7 729 aaPredicted RBP22.49■■□□□ 1.19
CCS-201ENST00000310190 OLFM4Q6UX06 510 aa22.49■■□□□ 1.19
CCS-201ENST00000310190 KAZALD1Q96I82 304 aa22.49■■□□□ 1.19
CCS-201ENST00000310190 CDC5LQ99459 802 aaKnown RBP22.49■■□□□ 1.19
CCS-201ENST00000310190 TMX4Q9H1E5 349 aaPredicted RBP22.49■■□□□ 1.19
CCS-201ENST00000310190 NBPF7P0C2Y1 421 aaPredicted RBP22.48■■□□□ 1.19
CCS-201ENST00000310190 TRIM27P14373 513 aa22.48■■□□□ 1.19
CCS-201ENST00000310190 ZNF784Q8NCA9 323 aaPredicted RBP22.48■■□□□ 1.19
CCS-201ENST00000310190 GREM2Q9H772 168 aa22.48■■□□□ 1.19
CCS-201ENST00000310190 SEC31BQ9NQW1 1179 aa22.48■■□□□ 1.19
CCS-201ENST00000310190 BSDC1Q9NW68 430 aaPredicted RBP22.48■■□□□ 1.19
CCS-201ENST00000310190 RNF181Q9P0P0 153 aa22.48■■□□□ 1.19
CCS-201ENST00000310190 ZNF219Q9P2Y4 722 aaPredicted RBP22.48■■□□□ 1.19
CCS-201ENST00000310190 SUPT20HQ8NEM7 779 aa22.47■■□□□ 1.19
CCS-201ENST00000310190 TIAM2Q8IVF5 1701 aa22.47■■□□□ 1.19
CCS-201ENST00000310190 DUOX1Q9NRD9 1551 aa22.46■■□□□ 1.19
CCS-201ENST00000310190 ZKSCAN2Q63HK3 967 aa22.46■■□□□ 1.19
CCS-201ENST00000310190 ANKRD18AQ8IVF6 992 aa22.46■■□□□ 1.19
CCS-201ENST00000310190 HDAC5Q9UQL6 1122 aa22.46■■□□□ 1.19
CCS-201ENST00000310190 IARSP41252 1262 aaKnown RBP22.45■■□□□ 1.18
CCS-201ENST00000310190 EPHA10Q5JZY3 1008 aa22.45■■□□□ 1.18
CCS-201ENST00000310190 MPNDQ8N594 471 aa22.45■■□□□ 1.18
CCS-201ENST00000310190 ITGA6P23229 1130 aa22.44■■□□□ 1.18
CCS-201ENST00000310190 SUCLG2Q96I99 432 aa22.44■■□□□ 1.18
CCS-201ENST00000310190 LMBR1LQ6UX01 489 aa22.43■■□□□ 1.18
CCS-201ENST00000310190 DPP8Q6V1X1 898 aaPredicted RBP22.43■■□□□ 1.18
CCS-201ENST00000310190 FZD9O00144 591 aa22.42■■□□□ 1.18
CCS-201ENST00000310190 FAM161AQ3B820 660 aa22.42■■□□□ 1.18
CCS-201ENST00000310190 ANKRD18BA2A2Z9 1011 aa22.41■■□□□ 1.18
CCS-201ENST00000310190 KIAA2012Q0VF49 1180 aa22.41■■□□□ 1.18
CCS-201ENST00000310190 IFIT5Q13325 482 aaKnown RBP22.41■■□□□ 1.18
CCS-201ENST00000310190 SLC51AQ86UW1 340 aa22.41■■□□□ 1.18
CCS-201ENST00000310190 ANKRD44Q8N8A2 993 aa22.41■■□□□ 1.18
CCS-201ENST00000310190 ZNF277Q9NRM2 450 aaPredicted RBP22.41■■□□□ 1.18
CCS-201ENST00000310190 GLTPD2A6NH11 291 aa22.4■■□□□ 1.18
CCS-201ENST00000310190 IGHMBP2P38935 993 aaKnown RBP22.4■■□□□ 1.18
CCS-201ENST00000310190 RCAN3Q9UKA8 241 aa22.4■■□□□ 1.18
CCS-201ENST00000310190 MINPP1Q9UNW1 487 aa22.4■■□□□ 1.18
CCS-201ENST00000310190 XDHP47989 1333 aa22.39■■□□□ 1.18
CCS-201ENST00000310190 GNAI3P08754 354 aa22.39■■□□□ 1.17
CCS-201ENST00000310190 GPSM2P81274 684 aa22.39■■□□□ 1.17
CCS-201ENST00000310190 FRAT1Q92837 279 aaPredicted RBP22.39■■□□□ 1.17
CCS-201ENST00000310190 CCDC85AQ96PX6 553 aaPredicted RBP22.39■■□□□ 1.17
CCS-201ENST00000310190 BICC1Q9H694 974 aaKnown RBP22.39■■□□□ 1.17
CCS-201ENST00000310190 COL4A5P29400 1685 aa22.39■■□□□ 1.17
CCS-201ENST00000310190 WDR90Q96KV7 1748 aa22.38■■□□□ 1.17
CCS-201ENST00000310190 MS4A1P11836 297 aa22.38■■□□□ 1.17
CCS-201ENST00000310190 CCDC57Q2TAC2 916 aa22.38■■□□□ 1.17
CCS-201ENST00000310190 TBC1D16Q8TBP0 767 aa22.38■■□□□ 1.17
CCS-201ENST00000310190 POLLQ9UGP5 575 aa22.38■■□□□ 1.17
CCS-201ENST00000310190 SPEF2Q9C093 1822 aa22.38■■□□□ 1.17
CCS-201ENST00000310190 KDM2BQ8NHM5 1336 aa22.37■■□□□ 1.17
CCS-201ENST00000310190 UBTFL1P0CB47 393 aaPredicted RBP22.37■■□□□ 1.17
CCS-201ENST00000310190 DZIP1LQ8IYY4 767 aaKnown RBP22.37■■□□□ 1.17
CCS-201ENST00000310190 ANKRD2Q9GZV1 360 aa22.37■■□□□ 1.17
CCS-201ENST00000310190 NSFL1CQ9UNZ2 370 aaKnown RBP22.37■■□□□ 1.17
CCS-201ENST00000310190 A0A1B0GUL6 1792 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms