RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 MVPQ14764 893 aaKnown RBP22.46■■□□□ 1.19
SSSCA1-201ENST00000309328 SOGA3Q5TF21 947 aa22.46■■□□□ 1.19
SSSCA1-201ENST00000309328 ANKRD31Q8N7Z5 1873 aa22.45■■□□□ 1.19
SSSCA1-201ENST00000309328 PLIN1O60240 522 aa22.45■■□□□ 1.18
SSSCA1-201ENST00000309328 BBOX1O75936 387 aa22.45■■□□□ 1.18
SSSCA1-201ENST00000309328 CSF1RP07333 972 aa22.45■■□□□ 1.18
SSSCA1-201ENST00000309328 TTLL11Q8NHH1 800 aa22.45■■□□□ 1.18
SSSCA1-201ENST00000309328 PANK1Q8TE04 598 aa22.45■■□□□ 1.18
SSSCA1-201ENST00000309328 CDC5LQ99459 802 aaKnown RBP22.45■■□□□ 1.18
SSSCA1-201ENST00000309328 GRAPQ13588 217 aa22.44■■□□□ 1.18
SSSCA1-201ENST00000309328 RABL6Q3YEC7 729 aaPredicted RBP22.44■■□□□ 1.18
SSSCA1-201ENST00000309328 GRIPAP1Q4V328 841 aa22.44■■□□□ 1.18
SSSCA1-201ENST00000309328 C3orf67Q6ZVT6 689 aa22.44■■□□□ 1.18
SSSCA1-201ENST00000309328 GRAPLQ8TC17 118 aaPredicted RBP22.44■■□□□ 1.18
SSSCA1-201ENST00000309328 JARID2Q92833 1246 aaPredicted RBP22.44■■□□□ 1.18
SSSCA1-201ENST00000309328 TMX4Q9H1E5 349 aaPredicted RBP22.44■■□□□ 1.18
SSSCA1-201ENST00000309328 TNNQ9UQP3 1299 aa22.44■■□□□ 1.18
SSSCA1-201ENST00000309328 GNAI2P04899 355 aa22.43■■□□□ 1.18
SSSCA1-201ENST00000309328 CC2D2BQ6DHV5 1058 aa22.43■■□□□ 1.18
SSSCA1-201ENST00000309328 SUCLG2Q96I99 432 aa22.43■■□□□ 1.18
SSSCA1-201ENST00000309328 MEIS3Q99687 375 aa22.43■■□□□ 1.18
SSSCA1-201ENST00000309328 TNRC6CQ9HCJ0 1690 aaKnown RBP22.42■■□□□ 1.18
SSSCA1-201ENST00000309328 FOXO4P98177 505 aa22.42■■□□□ 1.18
SSSCA1-201ENST00000309328 PRPF40BQ6NWY9 871 aaKnown RBP22.42■■□□□ 1.18
SSSCA1-201ENST00000309328 DDX60Q8IY21 1712 aaKnown RBP22.42■■□□□ 1.18
SSSCA1-201ENST00000309328 KIAA1551Q9HCM1 1747 aa22.42■■□□□ 1.18
SSSCA1-201ENST00000309328 DLEC1Q9Y238 1755 aa22.41■■□□□ 1.18
SSSCA1-201ENST00000309328 ZBTB7BO15156 539 aaPredicted RBP22.41■■□□□ 1.18
SSSCA1-201ENST00000309328 GRIN3BO60391 1043 aa22.41■■□□□ 1.18
SSSCA1-201ENST00000309328 IFIT5Q13325 482 aaKnown RBP22.41■■□□□ 1.18
SSSCA1-201ENST00000309328 BCS1LQ9Y276 419 aa22.41■■□□□ 1.18
SSSCA1-201ENST00000309328 ANKRD18BA2A2Z9 1011 aa22.4■■□□□ 1.18
SSSCA1-201ENST00000309328 CCDC57Q2TAC2 916 aa22.4■■□□□ 1.18
SSSCA1-201ENST00000309328 LMBR1LQ6UX01 489 aa22.4■■□□□ 1.18
SSSCA1-201ENST00000309328 BICC1Q9H694 974 aaKnown RBP22.4■■□□□ 1.18
SSSCA1-201ENST00000309328 GREM2Q9H772 168 aa22.4■■□□□ 1.18
SSSCA1-201ENST00000309328 RPS8P62241 208 aaKnown RBP22.39■■□□□ 1.17
SSSCA1-201ENST00000309328 AAMPQ13685 434 aa22.39■■□□□ 1.17
SSSCA1-201ENST00000309328 GPR162Q16538 588 aa22.39■■□□□ 1.17
SSSCA1-201ENST00000309328 ANKRD18AQ8IVF6 992 aa22.39■■□□□ 1.17
SSSCA1-201ENST00000309328 KAZALD1Q96I82 304 aa22.39■■□□□ 1.17
SSSCA1-201ENST00000309328 COG6Q9Y2V7 657 aa22.39■■□□□ 1.17
SSSCA1-201ENST00000309328 COL11A2P13942 1736 aaPredicted RBP22.39■■□□□ 1.17
SSSCA1-201ENST00000309328 PPEF1O14829 653 aaPredicted RBP22.38■■□□□ 1.17
SSSCA1-201ENST00000309328 ITGA6P23229 1130 aa22.38■■□□□ 1.17
SSSCA1-201ENST00000309328 IGHMBP2P38935 993 aaKnown RBP22.38■■□□□ 1.17
SSSCA1-201ENST00000309328 FAM161AQ3B820 660 aa22.38■■□□□ 1.17
SSSCA1-201ENST00000309328 CHMP3Q9Y3E7 222 aa22.38■■□□□ 1.17
SSSCA1-201ENST00000309328 LRRFIP2Q9Y608 721 aaKnown RBP22.38■■□□□ 1.17
SSSCA1-201ENST00000309328 MTX1Q13505 466 aa22.37■■□□□ 1.17
SSSCA1-201ENST00000309328 EPHA10Q5JZY3 1008 aa22.37■■□□□ 1.17
SSSCA1-201ENST00000309328 ATP6V0A2Q9Y487 856 aa22.37■■□□□ 1.17
SSSCA1-201ENST00000309328 SUPT16HQ9Y5B9 1047 aaKnown RBP22.37■■□□□ 1.17
SSSCA1-201ENST00000309328 CCDC93Q567U6 631 aa22.36■■□□□ 1.17
SSSCA1-201ENST00000309328 TAF7LQ5H9L4 462 aa22.36■■□□□ 1.17
SSSCA1-201ENST00000309328 SP8Q8IXZ3 490 aa22.36■■□□□ 1.17
SSSCA1-201ENST00000309328 RTKN2Q8IZC4 609 aa22.36■■□□□ 1.17
SSSCA1-201ENST00000309328 ANKRD44Q8N8A2 993 aa22.36■■□□□ 1.17
SSSCA1-201ENST00000309328 GOLGB1Q14789 3259 aaKnown RBP22.35■■□□□ 1.17
SSSCA1-201ENST00000309328 C20orf194Q5TEA3 1177 aa22.35■■□□□ 1.17
SSSCA1-201ENST00000309328 MPHOSPH8Q99549 860 aa22.35■■□□□ 1.17
SSSCA1-201ENST00000309328 ZBTB40Q9NUA8 1239 aa22.35■■□□□ 1.17
SSSCA1-201ENST00000309328 BSDC1Q9NW68 430 aaPredicted RBP22.35■■□□□ 1.17
SSSCA1-201ENST00000309328 MYH3P11055 1940 aa22.34■■□□□ 1.17
SSSCA1-201ENST00000309328 PELP1Q8IZL8 1130 aaKnown RBP22.34■■□□□ 1.17
SSSCA1-201ENST00000309328 C7orf43Q8WVR3 580 aa22.34■■□□□ 1.17
SSSCA1-201ENST00000309328 CELF1Q92879 486 aaKnown RBP22.34■■□□□ 1.17
SSSCA1-201ENST00000309328 CCDC85AQ96PX6 553 aaPredicted RBP22.34■■□□□ 1.17
SSSCA1-201ENST00000309328 FBXO3Q9UK99 471 aa22.34■■□□□ 1.17
SSSCA1-201ENST00000309328 BRCA1P38398 1863 aaKnown RBP22.34■■□□□ 1.17
SSSCA1-201ENST00000309328 SEC31BQ9NQW1 1179 aa22.33■■□□□ 1.17
SSSCA1-201ENST00000309328 C21orf2O43822 256 aa22.32■■□□□ 1.16
SSSCA1-201ENST00000309328 YBX3P16989 372 aaKnown RBP eCLIP22.31■■□□□ 1.16
SSSCA1-201ENST00000309328 LTBP3Q9NS15 1303 aa22.31■■□□□ 1.16
SSSCA1-201ENST00000309328 SRGAP3O43295 1099 aa22.3■■□□□ 1.16
SSSCA1-201ENST00000309328 RPAP2Q8IXW5 612 aaPredicted RBP22.3■■□□□ 1.16
SSSCA1-201ENST00000309328 SUPT20HQ8NEM7 779 aa22.3■■□□□ 1.16
SSSCA1-201ENST00000309328 HMMRO75330 724 aa22.29■■□□□ 1.16
SSSCA1-201ENST00000309328 LDHAL6AQ6ZMR3 332 aa22.29■■□□□ 1.16
SSSCA1-201ENST00000309328 PSMD1Q99460 953 aa22.29■■□□□ 1.16
SSSCA1-201ENST00000309328 ANKRD2Q9GZV1 360 aa22.29■■□□□ 1.16
SSSCA1-201ENST00000309328 ARFGEF1Q9Y6D6 1849 aa22.29■■□□□ 1.16
SSSCA1-201ENST00000309328 ATP8B2P98198 1209 aa22.28■■□□□ 1.16
SSSCA1-201ENST00000309328 VPS33BQ9H267 617 aa22.28■■□□□ 1.16
SSSCA1-201ENST00000309328 TAOK3Q9H2K8 898 aa22.28■■□□□ 1.16
SSSCA1-201ENST00000309328 PODXL2Q9NZ53 605 aa22.28■■□□□ 1.16
SSSCA1-201ENST00000309328 WWC3Q9ULE0 1092 aa22.28■■□□□ 1.16
SSSCA1-201ENST00000309328 DPP8Q6V1X1 898 aaPredicted RBP22.27■■□□□ 1.16
SSSCA1-201ENST00000309328 ARHGAP27Q6ZUM4 889 aa22.27■■□□□ 1.16
SSSCA1-201ENST00000309328 MPNDQ8N594 471 aa22.27■■□□□ 1.16
SSSCA1-201ENST00000309328 COPRSQ9NQ92 184 aa22.27■■□□□ 1.16
SSSCA1-201ENST00000309328 CNNM1Q9NRU3 951 aa22.27■■□□□ 1.16
SSSCA1-201ENST00000309328 XDHP47989 1333 aa22.27■■□□□ 1.16
SSSCA1-201ENST00000309328 MROH5Q6ZUA9 1318 aa22.27■■□□□ 1.16
SSSCA1-201ENST00000309328 CIAO1O76071 339 aa22.26■■□□□ 1.15
SSSCA1-201ENST00000309328 FKBP4Q02790 459 aaKnown RBP eCLIP22.26■■□□□ 1.15
SSSCA1-201ENST00000309328 CEP85Q6P2H3 762 aa22.26■■□□□ 1.15
SSSCA1-201ENST00000309328 SSH3Q8TE77 659 aa22.26■■□□□ 1.15
SSSCA1-201ENST00000309328 RTFDC1Q9BY42 306 aaPredicted RBP22.26■■□□□ 1.15
SSSCA1-201ENST00000309328 SLX4Q8IY92 1834 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms