RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 NIP7Q9Y221 180 aaKnown RBP eCLIP13.17□□□□□ -0.3
CASP3-201ENST00000308394 UBN2Q6ZU65 1347 aa13.17□□□□□ -0.3
CASP3-201ENST00000308394 RREB1Q92766 1687 aa13.17□□□□□ -0.3
CASP3-201ENST00000308394 PHF14O94880 888 aa13.17□□□□□ -0.3
CASP3-201ENST00000308394 APBA3O96018 575 aa13.17□□□□□ -0.3
CASP3-201ENST00000308394 G3BP1Q13283 466 aaKnown RBP eCLIP13.17□□□□□ -0.3
CASP3-201ENST00000308394 PLEKHM2Q8IWE5 1019 aa13.17□□□□□ -0.3
CASP3-201ENST00000308394 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
CASP3-201ENST00000308394 KIF1BPQ96EK5 621 aa13.17□□□□□ -0.3
CASP3-201ENST00000308394 NOP58Q9Y2X3 529 aaKnown RBP13.17□□□□□ -0.3
CASP3-201ENST00000308394 RBM19Q9Y4C8 960 aaKnown RBP13.17□□□□□ -0.3
CASP3-201ENST00000308394 ZPR1O75312 459 aa13.16□□□□□ -0.3
CASP3-201ENST00000308394 SLC27A3Q5K4L6 730 aa13.16□□□□□ -0.3
CASP3-201ENST00000308394 LY75O60449 1722 aa13.16□□□□□ -0.3
CASP3-201ENST00000308394 C8orf34Q49A92 452 aa13.16□□□□□ -0.3
CASP3-201ENST00000308394 MSH5O43196 834 aa13.16□□□□□ -0.3
CASP3-201ENST00000308394 SUSD4Q5VX71 490 aa13.16□□□□□ -0.3
CASP3-201ENST00000308394 CLEC4GQ6UXB4 293 aa13.16□□□□□ -0.3
CASP3-201ENST00000308394 CCDC85AQ96PX6 553 aaPredicted RBP13.16□□□□□ -0.3
CASP3-201ENST00000308394 NUP98P52948 1817 aa13.15□□□□□ -0.3
CASP3-201ENST00000308394 IRS4O14654 1257 aaPredicted RBP13.15□□□□□ -0.3
CASP3-201ENST00000308394 ANAPC15P60006 121 aa13.15□□□□□ -0.3
CASP3-201ENST00000308394 TXNRD1Q16881 649 aa13.15□□□□□ -0.3
CASP3-201ENST00000308394 TRAPPC3LQ5T215 181 aa13.15□□□□□ -0.3
CASP3-201ENST00000308394 USPL1Q5W0Q7 1092 aa13.15□□□□□ -0.3
CASP3-201ENST00000308394 BICDL1Q6ZP65 573 aa13.15□□□□□ -0.3
CASP3-201ENST00000308394 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
CASP3-201ENST00000308394 ARHGEF1Q92888 912 aaKnown RBP13.15□□□□□ -0.3
CASP3-201ENST00000308394 RFC4P35249 363 aa13.15□□□□□ -0.31
CASP3-201ENST00000308394 PARP10Q53GL7 1025 aa13.15□□□□□ -0.31
CASP3-201ENST00000308394 ERC1Q8IUD2 1116 aa13.15□□□□□ -0.31
CASP3-201ENST00000308394 UTP14AQ9BVJ6 771 aaKnown RBP13.15□□□□□ -0.31
CASP3-201ENST00000308394 SRP68Q9UHB9 627 aaKnown RBP13.15□□□□□ -0.31
CASP3-201ENST00000308394 NARFQ9UHQ1 456 aa13.15□□□□□ -0.31
CASP3-201ENST00000308394 PTPN12Q05209 780 aaKnown RBP13.14□□□□□ -0.31
CASP3-201ENST00000308394 RFX5P48382 616 aaPredicted RBP13.14□□□□□ -0.31
CASP3-201ENST00000308394 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
CASP3-201ENST00000308394 PROM2Q8N271 834 aa13.14□□□□□ -0.31
CASP3-201ENST00000308394 PLCD3Q8N3E9 789 aa13.14□□□□□ -0.31
CASP3-201ENST00000308394 COPRSQ9NQ92 184 aa13.14□□□□□ -0.31
CASP3-201ENST00000308394 CDHR2Q9BYE9 1310 aa13.14□□□□□ -0.31
CASP3-201ENST00000308394 CCDC57Q2TAC2 916 aa13.13□□□□□ -0.31
CASP3-201ENST00000308394 CLASRPQ8N2M8 674 aaKnown RBP13.13□□□□□ -0.31
CASP3-201ENST00000308394 C4BP0C0L5 1744 aa13.13□□□□□ -0.31
CASP3-201ENST00000308394 PLSCR1O15162 318 aa13.13□□□□□ -0.31
CASP3-201ENST00000308394 SETQ01105 290 aaPredicted RBP13.13□□□□□ -0.31
CASP3-201ENST00000308394 BMP2KLQ5H9B9 411 aa13.13□□□□□ -0.31
CASP3-201ENST00000308394 ANKRD36CQ5JPF3 1778 aa13.13□□□□□ -0.31
CASP3-201ENST00000308394 SH3TC1Q8TE82 1336 aa13.13□□□□□ -0.31
CASP3-201ENST00000308394 PLA2G12BQ9BX93 195 aa13.13□□□□□ -0.31
CASP3-201ENST00000308394 SASH1O94885 1247 aa13.12□□□□□ -0.31
CASP3-201ENST00000308394 MX1P20591 662 aa13.12□□□□□ -0.31
CASP3-201ENST00000308394 PDE1AP54750 535 aa13.12□□□□□ -0.31
CASP3-201ENST00000308394 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
CASP3-201ENST00000308394 TBC1D9BQ66K14 1250 aa13.12□□□□□ -0.31
CASP3-201ENST00000308394 TAF1LQ8IZX4 1826 aa13.12□□□□□ -0.31
CASP3-201ENST00000308394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.12□□□□□ -0.31
CASP3-201ENST00000308394 PDE8AO60658 829 aa13.12□□□□□ -0.31
CASP3-201ENST00000308394 HCLS1P14317 486 aaPredicted RBP13.12□□□□□ -0.31
CASP3-201ENST00000308394 ZNF594Q96JF6 807 aaPredicted RBP13.12□□□□□ -0.31
CASP3-201ENST00000308394 BCL2L12Q9HB09 334 aa13.12□□□□□ -0.31
CASP3-201ENST00000308394 CTSWP56202 376 aa13.11□□□□□ -0.31
CASP3-201ENST00000308394 TTC22Q5TAA0 569 aa13.11□□□□□ -0.31
CASP3-201ENST00000308394 SETDB2Q96T68 719 aa13.11□□□□□ -0.31
CASP3-201ENST00000308394 CSF1RP07333 972 aa13.11□□□□□ -0.31
CASP3-201ENST00000308394 GSPT1P15170 499 aaKnown RBP13.11□□□□□ -0.31
CASP3-201ENST00000308394 IFIT5Q13325 482 aaKnown RBP13.11□□□□□ -0.31
CASP3-201ENST00000308394 TTLL11Q8NHH1 800 aa13.11□□□□□ -0.31
CASP3-201ENST00000308394 RAD21O60216 631 aa13.1□□□□□ -0.31
CASP3-201ENST00000308394 NTSR2O95665 410 aa13.1□□□□□ -0.31
CASP3-201ENST00000308394 IFIT2P09913 472 aaKnown RBP13.1□□□□□ -0.31
CASP3-201ENST00000308394 HMGB2P26583 209 aaKnown RBP13.1□□□□□ -0.31
CASP3-201ENST00000308394 ADRA2BP18089 450 aa13.1□□□□□ -0.31
CASP3-201ENST00000308394 AACSQ86V21 672 aa13.1□□□□□ -0.31
CASP3-201ENST00000308394 GPATCH11Q8N954 259 aa13.1□□□□□ -0.31
CASP3-201ENST00000308394 OSBPL3Q9H4L5 887 aa13.1□□□□□ -0.31
CASP3-201ENST00000308394 GREM2Q9H772 168 aa13.1□□□□□ -0.31
CASP3-201ENST00000308394 PRDM4Q9UKN5 801 aa13.1□□□□□ -0.31
CASP3-201ENST00000308394 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.1□□□□□ -0.31
CASP3-201ENST00000308394 USP42Q9H9J4 1324 aaKnown RBP13.09□□□□□ -0.31
CASP3-201ENST00000308394 RGL2O15211 777 aa13.09□□□□□ -0.31
CASP3-201ENST00000308394 ITGA6P23229 1130 aa13.09□□□□□ -0.31
CASP3-201ENST00000308394 TFCP2Q12800 502 aa13.09□□□□□ -0.31
CASP3-201ENST00000308394 SALL3Q9BXA9 1300 aa13.09□□□□□ -0.31
CASP3-201ENST00000308394 RBM25P49756 843 aaKnown RBP13.09□□□□□ -0.31
CASP3-201ENST00000308394 DNAJC2Q99543 621 aaKnown RBP13.09□□□□□ -0.31
CASP3-201ENST00000308394 TFCP2L1Q9NZI6 479 aa13.09□□□□□ -0.31
CASP3-201ENST00000308394 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
CASP3-201ENST00000308394 ANKRD18BA2A2Z9 1011 aa13.08□□□□□ -0.31
CASP3-201ENST00000308394 NPHP1O15259 732 aa13.08□□□□□ -0.31
CASP3-201ENST00000308394 SSFA2P28290 1259 aa13.08□□□□□ -0.31
CASP3-201ENST00000308394 LRRC24Q50LG9 513 aa13.08□□□□□ -0.31
CASP3-201ENST00000308394 FOXD4L5Q5VV16 416 aaPredicted RBP13.08□□□□□ -0.31
CASP3-201ENST00000308394 FOXD4L4Q8WXT5 416 aaPredicted RBP13.08□□□□□ -0.31
CASP3-201ENST00000308394 CCDC8Q9H0W5 538 aaPredicted RBP13.08□□□□□ -0.31
CASP3-201ENST00000308394 EYA2O00167 538 aa13.08□□□□□ -0.32
CASP3-201ENST00000308394 KDM4AO75164 1064 aa13.08□□□□□ -0.32
CASP3-201ENST00000308394 ERFEQ4G0M1 354 aa13.08□□□□□ -0.32
CASP3-201ENST00000308394 NBPF5PQ86XG9 351 aaPredicted RBP13.08□□□□□ -0.32
CASP3-201ENST00000308394 EAF2Q96CJ1 260 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms